Salvia prionitis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_065866.1 · 4–77 bp · −
psbA · NC_065866.1 · 385–1,443 bp · −
trnK-UUU · NC_065866.1 · 1,666–4,259 bp · −
matK · NC_065866.1 · 1,965–3,527 bp · −
rps16 · NC_065866.1 · 4,828–5,938 bp · −
trnQ-UUG · NC_065866.1 · 6,905–6,976 bp · −
trnS-GCU · NC_065866.1 · 8,220–8,307 bp · −
atpA · NC_065866.1 · 10,118–11,641 bp · −
atpF · NC_065866.1 · 11,738–12,985 bp · −
atpH · NC_065866.1 · 13,258–13,503 bp · −
atpI · NC_065866.1 · 14,474–15,217 bp · −
rps2 · NC_065866.1 · 15,444–16,154 bp · −
rpoC2 · NC_065866.1 · 16,363–20,550 bp · −
rpoC1 · NC_065866.1 · 20,708–23,521 bp · −
rpoB · NC_065866.1 · 23,548–26,760 bp · −
psbM · NC_065866.1 · 29,204–29,308 bp · −
trnD-GUC · NC_065866.1 · 29,829–29,902 bp · −
trnY-GUA · NC_065866.1 · 30,013–30,096 bp · −
trnE-UUC · NC_065866.1 · 30,168–30,240 bp · −
trnS-UGA · NC_065866.1 · 34,906–34,998 bp · −
trnfM-CAU · NC_065866.1 · 36,043–36,116 bp · −
rps14 · NC_065866.1 · 36,261–36,563 bp · −
psaB · NC_065866.1 · 36,686–38,890 bp · −
psaA · NC_065866.1 · 38,916–41,168 bp · −
ycf3 · NC_065866.1 · 41,959–43,890 bp · −
rps4 · NC_065866.1 · 45,070–45,675 bp · −
trnT-UGU · NC_065866.1 · 46,047–46,119 bp · −
ndhJ · NC_065866.1 · 48,238–48,714 bp · −
ndhK · NC_065866.1 · 48,825–49,502 bp · −
ndhC · NC_065866.1 · 49,554–49,916 bp · −
trnV-UAC · NC_065866.1 · 50,866–51,519 bp · −
atpE · NC_065866.1 · 51,976–52,377 bp · −
atpB · NC_065866.1 · 52,374–53,870 bp · −
psbJ · NC_065866.1 · 63,316–63,438 bp · −
psbL · NC_065866.1 · 63,568–63,684 bp · −
psbF · NC_065866.1 · 63,708–63,827 bp · −
psbE · NC_065866.1 · 63,842–64,093 bp · −
trnW-CCA · NC_065866.1 · 65,402–65,475 bp · −
trnP-UGG · NC_065866.1 · 65,646–65,719 bp · −
rpl20 · NC_065866.1 · 67,494–67,880 bp · −
rps12 · NC_065866.1 · 68,692–68,805 bp · −
rps12 · NC_065866.1 · 96,055–96,838 bp · −
clpP · NC_065866.1 · 68,929–70,840 bp · −
psbN · NC_065866.1 · 73,156–73,287 bp · −
rpoA · NC_065866.1 · 76,663–77,670 bp · −
rps11 · NC_065866.1 · 77,742–78,158 bp · −
rpl36 · NC_065866.1 · 78,268–78,381 bp · −
infA · NC_065866.1 · 78,477–78,710 bp · −
rps8 · NC_065866.1 · 78,837–79,241 bp · −
rpl14 · NC_065866.1 · 79,431–79,799 bp · −
rpl16 · NC_065866.1 · 79,931–81,211 bp · −
rps3 · NC_065866.1 · 81,347–82,009 bp · −
rpl22 · NC_065866.1 · 81,994–82,461 bp · −
rps19 · NC_065866.1 · 82,531–82,809 bp · −
rps19 · NC_065866.1 · 82,767–82,809 bp · −
rpl2 · NC_065866.1 · 82,869–84,351 bp · −
rpl23 · NC_065866.1 · 84,370–84,651 bp · −
trnI-CAU · NC_065866.1 · 84,817–84,890 bp · −
trnL-CAA · NC_065866.1 · 92,412–92,492 bp · −
ndhB · NC_065866.1 · 93,052–95,205 bp · −
rps7 · NC_065866.1 · 95,534–96,001 bp · −
trnN-GUU · NC_065866.1 · 106,883–106,954 bp · −
ndhF · NC_065866.1 · 108,308–110,524 bp · −
ndhD · NC_065866.1 · 113,232–114,773 bp · −
psaC · NC_065866.1 · 114,891–115,136 bp · −
ndhE · NC_065866.1 · 115,387–115,692 bp · −
ndhG · NC_065866.1 · 115,908–116,438 bp · −
ndhI · NC_065866.1 · 116,815–117,321 bp · −
ndhA · NC_065866.1 · 117,402–119,478 bp · −
ndhH · NC_065866.1 · 119,480–120,715 bp · −
rps15 · NC_065866.1 · 120,761–121,033 bp · −
ycf1 · NC_065866.1 · 121,459–127,086 bp · −
trnR-ACG · NC_065866.1 · 127,896–127,969 bp · −
rrn5 · NC_065866.1 · 128,213–128,333 bp · −
rrn4.5 · NC_065866.1 · 128,589–128,691 bp · −
rrn23 · NC_065866.1 · 128,792–131,600 bp · −
trnA-UGC · NC_065866.1 · 131,766–132,633 bp · −
trnI-GAU · NC_065866.1 · 132,698–133,709 bp · −
rrn16 · NC_065866.1 · 134,008–135,498 bp · −
trnV-GAC · NC_065866.1 · 135,725–135,796 bp · −
ycf15 · NC_065866.1 · 142,109–142,357 bp · −
ycf2 · NC_065866.1 · 142,448–149,281 bp · −
psbK · NC_065866.1 · 7,360–7,548 bp · +
psbI · NC_065866.1 · 7,945–8,055 bp · +
trnG-UCC · NC_065866.1 · 9,617–9,750 bp · +
trnR-UCU · NC_065866.1 · 9,935–10,006 bp · +
trnC-GCA · NC_065866.1 · 27,905–27,975 bp · +
petN · NC_065866.1 · 28,138–28,227 bp · +
trnT-GGU · NC_065866.1 · 30,779–30,850 bp · +
psbD · NC_065866.1 · 32,230–33,291 bp · +
psbC · NC_065866.1 · 33,239–34,660 bp · +
psbZ · NC_065866.1 · 35,333–35,521 bp · +
trnG-GCC · NC_065866.1 · 35,793–35,863 bp · +
trnS-GGA · NC_065866.1 · 44,707–44,793 bp · +
trnL-UAA · NC_065866.1 · 46,795–47,334 bp · +
trnF-GAA · NC_065866.1 · 47,633–47,705 bp · +
trnM-CAU · NC_065866.1 · 51,708–51,780 bp · +
rbcL · NC_065866.1 · 54,634–56,088 bp · +
accD · NC_065866.1 · 56,779–58,266 bp · +
psaI · NC_065866.1 · 58,729–58,839 bp · +
ycf4 · NC_065866.1 · 59,294–59,848 bp · +
cemA · NC_065866.1 · 60,396–61,085 bp · +
petA · NC_065866.1 · 61,291–62,253 bp · +
petL · NC_065866.1 · 64,900–64,995 bp · +
petG · NC_065866.1 · 65,174–65,287 bp · +
psaJ · NC_065866.1 · 65,971–66,144 bp · +
rpl33 · NC_065866.1 · 66,596–66,796 bp · +
rps18 · NC_065866.1 · 66,957–67,262 bp · +
rps12 · NC_065866.1 · 137,422–138,205 bp · +
psbB · NC_065866.1 · 71,282–72,808 bp · +
psbT · NC_065866.1 · 72,988–73,095 bp · +
psbH · NC_065866.1 · 73,393–73,614 bp · +
petB · NC_065866.1 · 73,740–75,090 bp · +
petD · NC_065866.1 · 75,284–76,486 bp · +
ycf2 · NC_065866.1 · 84,979–91,812 bp · +
ycf15 · NC_065866.1 · 91,903–92,151 bp · +
trnV-GAC · NC_065866.1 · 98,462–98,533 bp · +
rrn16 · NC_065866.1 · 98,760–100,250 bp · +
trnI-GAU · NC_065866.1 · 100,549–101,560 bp · +
trnA-UGC · NC_065866.1 · 101,625–102,492 bp · +
rrn23 · NC_065866.1 · 102,658–105,466 bp · +
rrn4.5 · NC_065866.1 · 105,567–105,669 bp · +
rrn5 · NC_065866.1 · 105,926–106,046 bp · +
trnR-ACG · NC_065866.1 · 106,290–106,363 bp · +
rpl32 · NC_065866.1 · 110,976–111,146 bp · +
trnL-UAG · NC_065866.1 · 111,851–111,930 bp · +
ccsA · NC_065866.1 · 111,975–113,000 bp · +
trnN-GUU · NC_065866.1 · 127,305–127,376 bp · +
rps7 · NC_065866.1 · 138,259–138,726 bp · +
ndhB · NC_065866.1 · 139,055–141,208 bp · +
trnL-CAA · NC_065866.1 · 141,768–141,848 bp · +
trnI-CAU · NC_065866.1 · 149,370–149,443 bp · +
rpl23 · NC_065866.1 · 149,609–149,890 bp · +
rpl2 · NC_065866.1 · 149,909–151,391 bp · +
rps19 · NC_065866.1 · 151,451–151,493 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia prionitis
ANNOTATED PLASTOME
NC_065866.1
151,493 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37873 75746 113620 151493 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 385 1443 1059 Locate
trnK-UUU gene − 1666 4259 2594 Locate
matK gene − 1965 3527 1563 Locate
rps16 gene − 4828 5938 1111 Locate
trnQ-UUG gene − 6905 6976 72 Locate
psbK gene + 7360 7548 189 Locate
psbI gene + 7945 8055 111 Locate
trnS-GCU gene − 8220 8307 88 Locate
trnG-UCC gene + 9617 9750 134 Locate
trnR-UCU gene + 9935 10006 72 Locate
atpA gene − 10118 11641 1524 Locate
atpF gene − 11738 12985 1248 Locate
atpH gene − 13258 13503 246 Locate
atpI gene − 14474 15217 744 Locate
rps2 gene − 15444 16154 711 Locate
rpoC2 gene − 16363 20550 4188 Locate
rpoC1 gene − 20708 23521 2814 Locate
rpoB gene − 23548 26760 3213 Locate
trnC-GCA gene + 27905 27975 71 Locate
petN gene + 28138 28227 90 Locate
psbM gene − 29204 29308 105 Locate
trnD-GUC gene − 29829 29902 74 Locate
trnY-GUA gene − 30013 30096 84 Locate
trnE-UUC gene − 30168 30240 73 Locate
trnT-GGU gene + 30779 30850 72 Locate
psbD gene + 32230 33291 1062 Locate
psbC gene + 33239 34660 1422 Locate
trnS-UGA gene − 34906 34998 93 Locate
psbZ gene + 35333 35521 189 Locate
trnG-GCC gene + 35793 35863 71 Locate
trnfM-CAU gene − 36043 36116 74 Locate
rps14 gene − 36261 36563 303 Locate
psaB gene − 36686 38890 2205 Locate
psaA gene − 38916 41168 2253 Locate
ycf3 gene − 41959 43890 1932 Locate
trnS-GGA gene + 44707 44793 87 Locate
rps4 gene − 45070 45675 606 Locate
trnT-UGU gene − 46047 46119 73 Locate
trnL-UAA gene + 46795 47334 540 Locate
trnF-GAA gene + 47633 47705 73 Locate
ndhJ gene − 48238 48714 477 Locate
ndhK gene − 48825 49502 678 Locate
ndhC gene − 49554 49916 363 Locate
trnV-UAC gene − 50866 51519 654 Locate
trnM-CAU gene + 51708 51780 73 Locate
atpE gene − 51976 52377 402 Locate
atpB gene − 52374 53870 1497 Locate
rbcL gene + 54634 56088 1455 Locate
accD gene + 56779 58266 1488 Locate
psaI gene + 58729 58839 111 Locate
ycf4 gene + 59294 59848 555 Locate
cemA gene + 60396 61085 690 Locate
petA gene + 61291 62253 963 Locate
psbJ gene − 63316 63438 123 Locate
psbL gene − 63568 63684 117 Locate
psbF gene − 63708 63827 120 Locate
psbE gene − 63842 64093 252 Locate
petL gene + 64900 64995 96 Locate
petG gene + 65174 65287 114 Locate
trnW-CCA gene − 65402 65475 74 Locate
trnP-UGG gene − 65646 65719 74 Locate
psaJ gene + 65971 66144 174 Locate
rpl33 gene + 66596 66796 201 Locate
rps18 gene + 66957 67262 306 Locate
rpl20 gene − 67494 67880 387 Locate
rps12 gene − 68692 68805 114 Locate
clpP gene − 68929 70840 1912 Locate
psbB gene + 71282 72808 1527 Locate
psbT gene + 72988 73095 108 Locate
psbN gene − 73156 73287 132 Locate
psbH gene + 73393 73614 222 Locate
petB gene + 73740 75090 1351 Locate
petD gene + 75284 76486 1203 Locate
rpoA gene − 76663 77670 1008 Locate
rps11 gene − 77742 78158 417 Locate
rpl36 gene − 78268 78381 114 Locate
infA gene − 78477 78710 234 Locate
rps8 gene − 78837 79241 405 Locate
rpl14 gene − 79431 79799 369 Locate
rpl16 gene − 79931 81211 1281 Locate
rps3 gene − 81347 82009 663 Locate
rpl22 gene − 81994 82461 468 Locate
rps19 gene − 82531 82809 279 Locate
rps19 gene − 82767 82809 43 Locate
rpl2 gene − 82869 84351 1483 Locate
rpl23 gene − 84370 84651 282 Locate
trnI-CAU gene − 84817 84890 74 Locate
ycf2 gene + 84979 91812 6834 Locate
ycf15 gene + 91903 92151 249 Locate
trnL-CAA gene − 92412 92492 81 Locate
ndhB gene − 93052 95205 2154 Locate
rps7 gene − 95534 96001 468 Locate
rps12 gene − 96055 96838 784 Locate
trnV-GAC gene + 98462 98533 72 Locate
rrn16 gene + 98760 100250 1491 Locate
trnI-GAU gene + 100549 101560 1012 Locate
trnA-UGC gene + 101625 102492 868 Locate
rrn23 gene + 102658 105466 2809 Locate
rrn4.5 gene + 105567 105669 103 Locate
rrn5 gene + 105926 106046 121 Locate
trnR-ACG gene + 106290 106363 74 Locate
trnN-GUU gene − 106883 106954 72 Locate
ndhF gene − 108308 110524 2217 Locate
rpl32 gene + 110976 111146 171 Locate
trnL-UAG gene + 111851 111930 80 Locate
ccsA gene + 111975 113000 1026 Locate
ndhD gene − 113232 114773 1542 Locate
psaC gene − 114891 115136 246 Locate
ndhE gene − 115387 115692 306 Locate
ndhG gene − 115908 116438 531 Locate
ndhI gene − 116815 117321 507 Locate
ndhA gene − 117402 119478 2077 Locate
ndhH gene − 119480 120715 1236 Locate
rps15 gene − 120761 121033 273 Locate
ycf1 gene − 121459 127086 5628 Locate
trnN-GUU gene + 127305 127376 72 Locate
trnR-ACG gene − 127896 127969 74 Locate
rrn5 gene − 128213 128333 121 Locate
rrn4.5 gene − 128589 128691 103 Locate
rrn23 gene − 128792 131600 2809 Locate
trnA-UGC gene − 131766 132633 868 Locate
trnI-GAU gene − 132698 133709 1012 Locate
rrn16 gene − 134008 135498 1491 Locate
trnV-GAC gene − 135725 135796 72 Locate
rps12 gene + 137422 138205 784 Locate
rps7 gene + 138259 138726 468 Locate
ndhB gene + 139055 141208 2154 Locate
trnL-CAA gene + 141768 141848 81 Locate
ycf15 gene − 142109 142357 249 Locate
ycf2 gene − 142448 149281 6834 Locate
trnI-CAU gene + 149370 149443 74 Locate
rpl23 gene + 149609 149890 282 Locate
rpl2 gene + 149909 151391 1483 Locate
rps19 gene + 151451 151493 43 Locate
Status Available
Accession NC_065866.1
Length 151,493 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 28 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources