Coordinate-aware organelle record

Salvia roborowskii chloroplast genome

Available MW752206.1 151,678 bp 134 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 12-85 bp · − strandpsbA · gene · 396-1,454 bp · − strandtrnK-UUU · gene · 1,686-4,279 bp · − strandmatK · gene · 1,985-3,547 bp · − strandrps16 · gene · 4,851-5,966 bp · − strandtrnQ-UUG · gene · 6,931-7,002 bp · − strandpsbK · gene · 7,382-7,561 bp · + strandpsbI · gene · 7,954-8,064 bp · + strandtrnS-GCU · gene · 8,222-8,309 bp · − strandtrnG-UCC · gene · 8,996-9,748 bp · + strandtrnR-UCU · gene · 9,931-10,002 bp · + strandatpA · gene · 10,108-11,631 bp · − strandatpF · gene · 11,740-12,989 bp · − strandatpH · gene · 13,264-13,509 bp · − strandatpI · gene · 14,510-15,253 bp · − strandrps2 · gene · 15,478-16,188 bp · − strandrpoC2 · gene · 16,397-20,584 bp · − strandrpoC1 · gene · 20,742-23,562 bp · − strandrpoB · gene · 23,589-26,801 bp · − strandtrnC-GCA · gene · 27,957-28,027 bp · + strandpetN · gene · 28,183-28,272 bp · + strandpsbM · gene · 29,249-29,353 bp · − strandtrnD-GUC · gene · 29,872-29,945 bp · − strandtrnY-GUA · gene · 30,056-30,139 bp · − strandtrnE-UUC · gene · 30,205-30,277 bp · − strandtrnT-GGU · gene · 30,817-30,888 bp · + strandpsbD · gene · 32,266-33,327 bp · + strandpsbC · gene · 33,275-34,696 bp · + strandtrnS-UGA · gene · 34,942-35,034 bp · − strandpsbZ · gene · 35,369-35,557 bp · + strandtrnG-GCC · gene · 35,829-35,899 bp · + strandtrnfM-CAU · gene · 36,073-36,146 bp · − strandrps14 · gene · 36,291-36,593 bp · − strandpsaB · gene · 36,716-38,920 bp · − strandpsaA · gene · 38,946-41,198 bp · − strandycf3 · gene · 41,988-43,925 bp · − strandtrnS-GGA · gene · 44,743-44,829 bp · + strandrps4 · gene · 45,106-45,711 bp · − strandtrnT-UGU · gene · 46,084-46,156 bp · − strandtrnL-UAA · gene · 46,822-47,362 bp · + strandtrnF-GAA · gene · 47,661-47,733 bp · + strandndhJ · gene · 48,267-48,743 bp · − strandndhK · gene · 48,854-49,531 bp · − strandndhC · gene · 49,583-49,945 bp · − strandtrnV-UAC · gene · 50,886-51,534 bp · − strandtrnM-CAU · gene · 51,715-51,787 bp · + strandatpE · gene · 51,992-52,393 bp · − strandatpB · gene · 52,390-53,886 bp · − strandrbcL · gene · 54,650-56,104 bp · + strandaccD · gene · 56,802-58,289 bp · + strandpsaI · gene · 58,764-58,874 bp · + strandycf4 · gene · 59,321-59,875 bp · + strandcemA · gene · 60,486-61,175 bp · + strandpetA · gene · 61,415-62,377 bp · + strandpsbJ · gene · 63,430-63,552 bp · − strandpsbL · gene · 63,682-63,798 bp · − strandpsbF · gene · 63,822-63,941 bp · − strandpsbE · gene · 63,956-64,207 bp · − strandpetL · gene · 64,982-65,077 bp · + strandpetG · gene · 65,257-65,370 bp · + strandtrnW-CCA · gene · 65,485-65,558 bp · − strandtrnP-UGG · gene · 65,737-65,810 bp · − strandpsaJ · gene · 66,062-66,235 bp · + strandrpl33 · gene · 66,686-66,886 bp · + strandrps18 · gene · 67,052-67,357 bp · + strandrpl20 · gene · 67,612-67,998 bp · − strandrps12 · gene · 68,807-96,972 bp · − strandrps12 · gene · 68,807-138,379 bp · + strandclpP · gene · 69,044-70,962 bp · − strandpsbB · gene · 71,411-72,937 bp · + strandpsbT · gene · 73,116-73,223 bp · + strandpsbN · gene · 73,284-73,415 bp · − strandpsbH · gene · 73,521-73,742 bp · + strandpetB · gene · 73,876-75,225 bp · + strandpetD · gene · 75,419-76,615 bp · + strandrpoA · gene · 76,792-77,799 bp · − strandrps11 · gene · 77,871-78,287 bp · − strandrpl36 · gene · 78,397-78,510 bp · − strandinfA · gene · 78,606-78,839 bp · − strandrps8 · gene · 78,966-79,370 bp · − strandrpl14 · gene · 79,557-79,925 bp · − strandrpl16 · gene · 80,057-81,333 bp · − strandrps3 · gene · 81,469-82,131 bp · − strandrpl22 · gene · 82,116-82,583 bp · − strandrps19 · gene · 82,653-82,931 bp · − strandrpl2 · gene · 82,991-84,473 bp · − strandrpl23 · gene · 84,492-84,773 bp · − strandtrnI-CAU · gene · 84,939-85,012 bp · − strandycf2 · gene · 85,101-91,946 bp · + strandycf15 · gene · 92,037-92,285 bp · + strandtrnL-CAA · gene · 92,546-92,626 bp · − strandndhB · gene · 93,186-95,339 bp · − strandrps7 · gene · 95,668-96,135 bp · − strandtrnV-GAC · gene · 98,599-98,670 bp · + strandrrn16 · gene · 98,897-100,387 bp · + strandtrnI-GAU · gene · 100,686-101,698 bp · + strandtrnA-UGC · gene · 101,763-102,639 bp · + strandrrn23 · gene · 102,805-105,613 bp · + strandrrn4.5 · gene · 105,714-105,816 bp · + strandrrn5 · gene · 106,072-106,192 bp · + strandtrnR-ACG · gene · 106,436-106,509 bp · + strandtrnN-GUU · gene · 107,029-107,100 bp · − strandycf1 · gene · 107,319-108,485 bp · + strandndhF · gene · 108,454-110,688 bp · − strandrpl32 · gene · 111,118-111,288 bp · + strandtrnL-UAG · gene · 112,007-112,086 bp · + strandccsA · gene · 112,131-113,156 bp · + strandndhD · gene · 113,387-114,928 bp · − strandpsaC · gene · 115,026-115,271 bp · − strandndhE · gene · 115,522-115,824 bp · − strandndhG · gene · 116,042-116,572 bp · − strandndhI · gene · 116,960-117,466 bp · − strandndhA · gene · 117,547-119,641 bp · − strandndhH · gene · 119,643-120,878 bp · − strandrps15 · gene · 120,924-121,196 bp · − strandycf1 · gene · 121,613-127,249 bp · − strandtrnN-GUU · gene · 127,468-127,539 bp · + strandtrnR-ACG · gene · 128,059-128,132 bp · − strandrrn5 · gene · 128,376-128,496 bp · − strandrrn4.5 · gene · 128,752-128,854 bp · − strandrrn23 · gene · 128,955-131,763 bp · − strandtrnA-UGC · gene · 131,929-132,805 bp · − strandtrnI-GAU · gene · 132,870-133,882 bp · − strandrrn16 · gene · 134,181-135,671 bp · − strandtrnV-GAC · gene · 135,898-135,969 bp · − strandrps7 · gene · 138,433-138,900 bp · + strandndhB · gene · 139,229-141,382 bp · + strandtrnL-CAA · gene · 141,942-142,022 bp · + strandycf15 · gene · 142,283-142,531 bp · − strandycf2 · gene · 142,622-149,467 bp · − strandtrnI-CAU · gene · 149,556-149,629 bp · + strandrpl23 · gene · 149,795-150,076 bp · + strandrpl2 · gene · 150,095-151,577 bp · + strandrps19 · gene · 151,637-151,678 bp · + strandSalvia roborowskiiANNOTATED PLASTOMEMW752206.1151,678 bp · 134 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: MW752206.1Features: 134 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−118574
psbAgenephotosystem-ii−39514541059
trnK-UUUgenetranslation-rna−168542792594
matKgeneother−198435471563
rps16generibosomal-protein−485059661116
trnQ-UUGgenetranslation-rna−6930700272
psbKgenephotosystem-ii+73817561180
psbIgenephotosystem-ii+79538064111
trnS-GCUgenetranslation-rna−8221830988
trnG-UCCgenetranslation-rna+89959748753
trnR-UCUgenetranslation-rna+99301000272
atpAgeneatp-synthase−10107116311524
atpFgeneatp-synthase−11739129891250
atpHgeneatp-synthase−1326313509246
atpIgeneatp-synthase−1450915253744
rps2generibosomal-protein−1547716188711
rpoC2generna-polymerase−16396205844188
rpoC1generna-polymerase−20741235622821
rpoBgenerna-polymerase−23588268013213
trnC-GCAgenetranslation-rna+279562802771
petNgenecytochrome+281822827290
psbMgenephotosystem-ii−2924829353105
trnD-GUCgenetranslation-rna−298712994574
trnY-GUAgenetranslation-rna−300553013984
trnE-UUCgenetranslation-rna−302043027773
trnT-GGUgenetranslation-rna+308163088872
psbDgenephotosystem-ii+32265333271062
psbCgenephotosystem-ii+33274346961422
trnS-UGAgenetranslation-rna−349413503493
psbZgenephotosystem-ii+3536835557189
trnG-GCCgenetranslation-rna+358283589971
trnfM-CAUgenetranslation-rna−360723614674
rps14generibosomal-protein−3629036593303
psaBgenephotosystem-i−36715389202205
psaAgenephotosystem-i−38945411982253
ycf3geneother−41987439251938
trnS-GGAgenetranslation-rna+447424482987
rps4generibosomal-protein−4510545711606
trnT-UGUgenetranslation-rna−460834615673
trnL-UAAgenetranslation-rna+4682147362541
trnF-GAAgenetranslation-rna+476604773373
ndhJgenenad-dehydrogenase−4826648743477
ndhKgenenad-dehydrogenase−4885349531678
ndhCgenenad-dehydrogenase−4958249945363
trnV-UACgenetranslation-rna−5088551534649
trnM-CAUgenetranslation-rna+517145178773
atpEgeneatp-synthase−5199152393402
atpBgeneatp-synthase−52389538861497
rbcLgeneother+54649561041455
accDgeneother+56801582891488
psaIgenephotosystem-i+5876358874111
ycf4geneother+5932059875555
cemAgeneother+6048561175690
petAgenecytochrome+6141462377963
psbJgenephotosystem-ii−6342963552123
psbLgenephotosystem-ii−6368163798117
psbFgenephotosystem-ii−6382163941120
psbEgenephotosystem-ii−6395564207252
petLgenecytochrome+649816507796
petGgenecytochrome+6525665370114
trnW-CCAgenetranslation-rna−654846555874
trnP-UGGgenetranslation-rna−657366581074
psaJgenephotosystem-i+6606166235174
rpl33generibosomal-protein+6668566886201
rps18generibosomal-protein+6705167357306
rpl20generibosomal-protein−6761167998387
rps12generibosomal-protein−688069697228166
rps12generibosomal-protein+6880613837969573
clpPgeneother−69043709621919
psbBgenephotosystem-ii+71410729371527
psbTgenephotosystem-ii+7311573223108
psbNgenephotosystem-ii−7328373415132
psbHgenephotosystem-ii+7352073742222
petBgenecytochrome+73875752251350
petDgenecytochrome+75418766151197
rpoAgenerna-polymerase−76791777991008
rps11generibosomal-protein−7787078287417
rpl36generibosomal-protein−7839678510114
infAgeneother−7860578839234
rps8generibosomal-protein−7896579370405
rpl14generibosomal-protein−7955679925369
rpl16generibosomal-protein−80056813331277
rps3generibosomal-protein−8146882131663
rpl22generibosomal-protein−8211582583468
rps19generibosomal-protein−8265282931279
rpl2generibosomal-protein−82990844731483
rpl23generibosomal-protein−8449184773282
trnI-CAUgenetranslation-rna−849388501274
ycf2geneother+85100919466846
ycf15geneother+9203692285249
trnL-CAAgenetranslation-rna−925459262681
ndhBgenenad-dehydrogenase−93185953392154
rps7generibosomal-protein−9566796135468
trnV-GACgenetranslation-rna+985989867072
rrn16generibosomal-rna+988961003871491
trnI-GAUgenetranslation-rna+1006851016981013
trnA-UGCgenetranslation-rna+101762102639877
rrn23generibosomal-rna+1028041056132809
rrn4.5generibosomal-rna+105713105816103
rrn5generibosomal-rna+106071106192121
trnR-ACGgenetranslation-rna+10643510650974
trnN-GUUgenetranslation-rna−10702810710072
ycf1geneother+1073181084851167
ndhFgenenad-dehydrogenase−1084531106882235
rpl32generibosomal-protein+111117111288171
trnL-UAGgenetranslation-rna+11200611208680
ccsAgeneother+1121301131561026
ndhDgenenad-dehydrogenase−1133861149281542
psaCgenephotosystem-i−115025115271246
ndhEgenenad-dehydrogenase−115521115824303
ndhGgenenad-dehydrogenase−116041116572531
ndhIgenenad-dehydrogenase−116959117466507
ndhAgenenad-dehydrogenase−1175461196412095
ndhHgenenad-dehydrogenase−1196421208781236
rps15generibosomal-protein−120923121196273
ycf1geneother−1216121272495637
trnN-GUUgenetranslation-rna+12746712753972
trnR-ACGgenetranslation-rna−12805812813274
rrn5generibosomal-rna−128375128496121
rrn4.5generibosomal-rna−128751128854103
rrn23generibosomal-rna−1289541317632809
trnA-UGCgenetranslation-rna−131928132805877
trnI-GAUgenetranslation-rna−1328691338821013
rrn16generibosomal-rna−1341801356711491
trnV-GACgenetranslation-rna−13589713596972
rps7generibosomal-protein+138432138900468
ndhBgenenad-dehydrogenase+1392281413822154
trnL-CAAgenetranslation-rna+14194114202281
ycf15geneother−142282142531249
ycf2geneother−1426211494676846
trnI-CAUgenetranslation-rna+14955514962974
rpl23generibosomal-protein+149794150076282
rpl2generibosomal-protein+1500941515771483
rps19generibosomal-protein+15163615167842

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources