Coordinate-aware organelle record

Salvia rosmarinus chloroplast genome

Available NC_027259.1 152,462 bp 134 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH (GUG) · gene · 11-85 bp · − strandpsbA · gene · 419-1,477 bp · − strandtrnK (UUU) · gene · 1,709-4,255 bp · − strandmatK · gene · 1,996-3,519 bp · − strandrps16 · gene · 4,795-5,926 bp · − strandtrnQ (UUG) · gene · 7,000-7,071 bp · − strandpsbK · gene · 7,457-7,642 bp · + strandpsbI · gene · 8,030-8,140 bp · + strandtrnS (GCU) · gene · 8,385-8,472 bp · − strandtrnG (UCC) · gene · 9,175-9,930 bp · + strandtrnR (UCU) · gene · 10,108-10,182 bp · + strandatpA · gene · 10,289-11,812 bp · − strandatpF · gene · 11,908-13,160 bp · − strandatpH · gene · 13,435-13,680 bp · − strandatpI · gene · 14,689-15,432 bp · − strandrps2 · gene · 15,657-16,367 bp · − strandrpoC2 · gene · 16,582-20,769 bp · − strandrpoC1 · gene · 20,927-23,771 bp · − strandrpoB · gene · 23,777-26,989 bp · − strandtrnC (GCA) · gene · 28,114-28,189 bp · + strandpetN · gene · 28,566-28,655 bp · + strandpsbM · gene · 29,804-29,908 bp · − strandtrnD (GUC) · gene · 30,427-30,500 bp · − strandtrnY (GUA) · gene · 30,611-30,694 bp · − strandtrnE (UUC) · gene · 30,766-30,835 bp · − strandtrnT (GGU) · gene · 31,420-31,491 bp · − strandpsbD · gene · 32,842-33,903 bp · + strandpsbC · gene · 33,851-35,272 bp · + strandtrnS (UGA) · gene · 35,517-35,609 bp · − strandpsbZ · gene · 35,944-36,132 bp · + strandtrnG (GCC) · gene · 36,411-36,481 bp · + strandtRNA-fM (CAU) · gene · 36,649-36,722 bp · − strandrps14 · gene · 36,867-37,169 bp · − strandpsaB · gene · 37,293-39,497 bp · − strandpsaA · gene · 39,523-41,775 bp · − strandycf3 · gene · 42,577-44,526 bp · − strandtrnS (GGA) · gene · 45,367-45,453 bp · + strandrps4 · gene · 45,736-46,341 bp · − strandtrnT (UGU) · gene · 46,685-46,757 bp · − strandtrnL (UAA) · gene · 47,419-47,995 bp · + strandtrnF (GAA) · gene · 48,276-48,348 bp · + strandndhJ · gene · 48,991-49,467 bp · − strandndhK · gene · 49,578-50,255 bp · − strandndhC · gene · 50,307-50,669 bp · − strandtrnV (UAC) · gene · 51,626-52,274 bp · − strandtrnM (CAU) · gene · 52,454-52,526 bp · + strandatpE · gene · 52,737-53,138 bp · − strandatpB · gene · 53,135-54,631 bp · − strandrbcL · gene · 55,373-56,806 bp · + strandaccD · gene · 57,438-58,980 bp · + strandpsaI · gene · 59,428-59,538 bp · + strandycf4 · gene · 59,983-60,537 bp · + strandcemA · gene · 60,932-61,621 bp · + strandpetA · gene · 61,835-62,797 bp · + strandpsbJ · gene · 63,812-63,934 bp · − strandpsbL · gene · 64,064-64,180 bp · − strandpsbF · gene · 64,204-64,323 bp · − strandpsbE · gene · 64,338-64,589 bp · − strandpetL · gene · 65,484-65,579 bp · + strandpetG · gene · 65,758-65,871 bp · + strandtrnW (CCA) · gene · 65,981-66,054 bp · − strandtrnP (UGG) · gene · 66,229-66,302 bp · − strandpsaJ · gene · 66,587-66,721 bp · + strandrpl33 · gene · 67,169-67,369 bp · + strandrps18 · gene · 67,552-67,857 bp · + strandrpl20 · gene · 68,091-68,477 bp · − strandrps12 · gene · 69,261-97,435 bp · − strandrps12 · gene · 69,261-139,176 bp · + strandclpP · gene · 69,513-71,426 bp · − strandpsbB · gene · 71,875-73,401 bp · + strandpsbT · gene · 73,576-73,683 bp · + strandpsbN · gene · 73,744-73,875 bp · − strandpsbH · gene · 73,981-74,202 bp · + strandpetB · gene · 74,329-75,697 bp · + strandpetD · gene · 75,885-77,076 bp · + strandrpoA · gene · 77,253-78,260 bp · − strandrps11 · gene · 78,331-78,747 bp · − strandrpl36 · gene · 78,852-78,965 bp · − strandinfA · gene · 79,061-79,294 bp · − strandrps8 · gene · 79,414-79,818 bp · − strandrpl14 · gene · 79,991-80,359 bp · − strandrpl16 · gene · 80,490-81,770 bp · − strandrps3 · gene · 81,936-82,598 bp · − strandrpl22 · gene · 82,583-83,050 bp · − strandrps19 · gene · 83,120-83,398 bp · − strandrpl2 · gene · 83,459-84,946 bp · − strandrpl23 · gene · 84,965-85,246 bp · − strandtrnH (CAU) · gene · 85,412-85,485 bp · − strandycf2 · gene · 85,574-92,407 bp · + strandycf15 · gene · 92,498-92,746 bp · + strandtrnL (CAA) · gene · 93,007-93,087 bp · − strandndhB · gene · 93,639-95,846 bp · − strandrps7 · gene · 96,121-96,588 bp · − strandtrnV (GAC) · gene · 99,087-99,158 bp · + strandrrn16 · gene · 99,385-100,877 bp · + strandtrnI (GAU) · gene · 101,176-102,194 bp · + strandtrnA (UGC) · gene · 102,260-103,137 bp · + strandrrn23 · gene · 103,332-106,142 bp · + strandrrn4.5 · gene · 106,242-106,344 bp · + strandrrn5 · gene · 106,604-106,724 bp · + strandtrnR (ACG) · gene · 106,968-107,041 bp · + strandtrnN (GUU) · gene · 107,566-107,637 bp · − strandycf1 · gene · 107,967-108,998 bp · + strandndhF · gene · 109,140-111,371 bp · − strandrpl32 · gene · 111,825-111,995 bp · + strandtrnL (UAG) · gene · 112,747-112,826 bp · + strandccsA · gene · 112,918-113,889 bp · + strandndhD · gene · 114,123-115,637 bp · − strandpsaC · gene · 115,758-116,003 bp · − strandndhE · gene · 116,254-116,559 bp · − strandndhG · gene · 116,770-117,300 bp · − strandndhI · gene · 117,684-118,190 bp · − strandndhA · gene · 118,271-120,371 bp · − strandndhH · gene · 120,373-121,554 bp · − strandrps15 · gene · 121,654-121,926 bp · − strandycf1 · gene · 122,353-127,851 bp · − strandtrnN (GUU) · gene · 128,181-128,252 bp · + strandtrnR (ACG) · gene · 128,778-128,850 bp · − strandrrn5 · gene · 129,094-129,214 bp · − strandrrn4.5 · gene · 129,474-129,576 bp · − strandrrn23 · gene · 129,676-132,486 bp · − strandtrnA (UGC) · gene · 132,681-133,558 bp · − strandtrnI (GAU) · gene · 133,624-134,642 bp · − strandrrn16 · gene · 134,941-136,433 bp · − strandtrnV (GAC) · gene · 136,660-136,731 bp · − strandrps7 · gene · 139,230-139,697 bp · + strandndhB · gene · 139,972-142,179 bp · + strandtrnL (CAA) · gene · 142,731-142,811 bp · − strandycf15 · gene · 143,072-143,320 bp · − strandycf2 · gene · 143,411-150,244 bp · − strandtrnH (CAU) · gene · 150,333-150,406 bp · + strandrpl23 · gene · 150,572-150,853 bp · + strandrpl2 · gene · 150,872-152,359 bp · + strandrps19 · gene · 152,420-152,449 bp · + strandSalvia rosmarinusANNOTATED PLASTOMENC_027259.1152,462 bp · 134 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_027259.1Features: 134 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features
GeneTypeGroupStrandStartEndLength
trnH (GUG)genetranslation-rna−108575
psbAgenephotosystem-ii−41814771059
trnK (UUU)genetranslation-rna−170842552547
matKgeneother−199535191524
rps16generibosomal-protein−479459261132
trnQ (UUG)genetranslation-rna−6999707172
psbKgenephotosystem-ii+74567642186
psbIgenephotosystem-ii+80298140111
trnS (GCU)genetranslation-rna−8384847288
trnG (UCC)genetranslation-rna+91749930756
trnR (UCU)genetranslation-rna+101071018275
atpAgeneatp-synthase−10288118121524
atpFgeneatp-synthase−11907131601253
atpHgeneatp-synthase−1343413680246
atpIgeneatp-synthase−1468815432744
rps2generibosomal-protein−1565616367711
rpoC2generna-polymerase−16581207694188
rpoC1generna-polymerase−20926237712845
rpoBgenerna-polymerase−23776269893213
trnC (GCA)genetranslation-rna+281132818976
petNgenecytochrome+285652865590
psbMgenephotosystem-ii−2980329908105
trnD (GUC)genetranslation-rna−304263050074
trnY (GUA)genetranslation-rna−306103069484
trnE (UUC)genetranslation-rna−307653083570
trnT (GGU)genetranslation-rna−314193149172
psbDgenephotosystem-ii+32841339031062
psbCgenephotosystem-ii+33850352721422
trnS (UGA)genetranslation-rna−355163560993
psbZgenephotosystem-ii+3594336132189
trnG (GCC)genetranslation-rna+364103648171
tRNA-fM (CAU)genetranslation-rna−366483672274
rps14generibosomal-protein−3686637169303
psaBgenephotosystem-i−37292394972205
psaAgenephotosystem-i−39522417752253
ycf3geneother−42576445261950
trnS (GGA)genetranslation-rna+453664545387
rps4generibosomal-protein−4573546341606
trnT (UGU)genetranslation-rna−466844675773
trnL (UAA)genetranslation-rna+4741847995577
trnF (GAA)genetranslation-rna+482754834873
ndhJgenenad-dehydrogenase−4899049467477
ndhKgenenad-dehydrogenase−4957750255678
ndhCgenenad-dehydrogenase−5030650669363
trnV (UAC)genetranslation-rna−5162552274649
trnM (CAU)genetranslation-rna+524535252673
atpEgeneatp-synthase−5273653138402
atpBgeneatp-synthase−53134546311497
rbcLgeneother+55372568061434
accDgeneother+57437589801543
psaIgenephotosystem-i+5942759538111
ycf4geneother+5998260537555
cemAgeneother+6093161621690
petAgenecytochrome+6183462797963
psbJgenephotosystem-ii−6381163934123
psbLgenephotosystem-ii−6406364180117
psbFgenephotosystem-ii−6420364323120
psbEgenephotosystem-ii−6433764589252
petLgenecytochrome+654836557996
petGgenecytochrome+6575765871114
trnW (CCA)genetranslation-rna−659806605474
trnP (UGG)genetranslation-rna−662286630274
psaJgenephotosystem-i+6658666721135
rpl33generibosomal-protein+6716867369201
rps18generibosomal-protein+6755167857306
rpl20generibosomal-protein−6809068477387
rps12generibosomal-protein−692609743528175
rps12generibosomal-protein+6926013917669916
clpPgeneother−69512714261914
psbBgenephotosystem-ii+71874734011527
psbTgenephotosystem-ii+7357573683108
psbNgenephotosystem-ii−7374373875132
psbHgenephotosystem-ii+7398074202222
petBgenecytochrome+74328756971369
petDgenecytochrome+75884770761192
rpoAgenerna-polymerase−77252782601008
rps11generibosomal-protein−7833078747417
rpl36generibosomal-protein−7885178965114
infAgeneother−7906079294234
rps8generibosomal-protein−7941379818405
rpl14generibosomal-protein−7999080359369
rpl16generibosomal-protein−80489817701281
rps3generibosomal-protein−8193582598663
rpl22generibosomal-protein−8258283050468
rps19generibosomal-protein−8311983398279
rpl2generibosomal-protein−83458849461488
rpl23generibosomal-protein−8496485246282
trnH (CAU)genetranslation-rna−854118548574
ycf2geneother+85573924076834
ycf15geneother+9249792746249
trnL (CAA)genetranslation-rna−930069308781
ndhBgenenad-dehydrogenase−93638958462208
rps7generibosomal-protein−9612096588468
trnV (GAC)genetranslation-rna+990869915872
rrn16generibosomal-rna+993841008771493
trnI (GAU)genetranslation-rna+1011751021941019
trnA (UGC)genetranslation-rna+102259103137878
rrn23generibosomal-rna+1033311061422811
rrn4.5generibosomal-rna+106241106344103
rrn5generibosomal-rna+106603106724121
trnR (ACG)genetranslation-rna+10696710704174
trnN (GUU)genetranslation-rna−10756510763772
ycf1geneother+1079661089981032
ndhFgenenad-dehydrogenase−1091391113712232
rpl32generibosomal-protein+111824111995171
trnL (UAG)genetranslation-rna+11274611282680
ccsAgeneother+112917113889972
ndhDgenenad-dehydrogenase−1141221156371515
psaCgenephotosystem-i−115757116003246
ndhEgenenad-dehydrogenase−116253116559306
ndhGgenenad-dehydrogenase−116769117300531
ndhIgenenad-dehydrogenase−117683118190507
ndhAgenenad-dehydrogenase−1182701203712101
ndhHgenenad-dehydrogenase−1203721215541182
rps15generibosomal-protein−121653121926273
ycf1geneother−1223521278515499
trnN (GUU)genetranslation-rna+12818012825272
trnR (ACG)genetranslation-rna−12877712885073
rrn5generibosomal-rna−129093129214121
rrn4.5generibosomal-rna−129473129576103
rrn23generibosomal-rna−1296751324862811
trnA (UGC)genetranslation-rna−132680133558878
trnI (GAU)genetranslation-rna−1336231346421019
rrn16generibosomal-rna−1349401364331493
trnV (GAC)genetranslation-rna−13665913673172
rps7generibosomal-protein+139229139697468
ndhBgenenad-dehydrogenase+1399711421792208
trnL (CAA)genetranslation-rna−14273014281181
ycf15geneother−143071143320249
ycf2geneother−1434101502446834
trnH (CAU)genetranslation-rna+15033215040674
rpl23generibosomal-protein+150571150853282
rpl2generibosomal-protein+1508711523591488
rps19generibosomal-protein+15241915244930

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources