Salvia scapiformis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_067743.1 · 11–84 bp · −
psbA · NC_067743.1 · 392–1,450 bp · −
trnK-UUU · NC_067743.1 · 1,673–4,266 bp · −
matK · NC_067743.1 · 1,972–3,534 bp · −
rps16 · NC_067743.1 · 4,835–5,945 bp · −
trnQ-UUG · NC_067743.1 · 6,915–6,986 bp · −
trnS-GCU · NC_067743.1 · 8,230–8,317 bp · −
atpA · NC_067743.1 · 10,128–11,651 bp · −
atpF · NC_067743.1 · 11,748–12,995 bp · −
atpH · NC_067743.1 · 13,268–13,513 bp · −
atpI · NC_067743.1 · 14,484–15,227 bp · −
rps2 · NC_067743.1 · 15,454–16,164 bp · −
rpoC2 · NC_067743.1 · 16,373–20,560 bp · −
rpoC1 · NC_067743.1 · 20,718–23,531 bp · −
rpoB · NC_067743.1 · 23,558–26,770 bp · −
psbM · NC_067743.1 · 29,214–29,318 bp · −
trnD-GUC · NC_067743.1 · 29,839–29,912 bp · −
trnY-GUA · NC_067743.1 · 30,023–30,106 bp · −
trnE-UUC · NC_067743.1 · 30,178–30,250 bp · −
trnS-UGA · NC_067743.1 · 34,929–35,021 bp · −
trnfM-CAU · NC_067743.1 · 36,066–36,139 bp · −
rps14 · NC_067743.1 · 36,284–36,586 bp · −
psaB · NC_067743.1 · 36,709–38,913 bp · −
psaA · NC_067743.1 · 38,939–41,191 bp · −
ycf3 · NC_067743.1 · 41,982–43,913 bp · −
rps4 · NC_067743.1 · 45,093–45,698 bp · −
trnT-UGU · NC_067743.1 · 46,070–46,142 bp · −
ndhJ · NC_067743.1 · 48,261–48,737 bp · −
ndhK · NC_067743.1 · 48,848–49,525 bp · −
ndhC · NC_067743.1 · 49,577–49,939 bp · −
trnV-UAC · NC_067743.1 · 50,889–51,537 bp · −
atpE · NC_067743.1 · 51,994–52,395 bp · −
atpB · NC_067743.1 · 52,392–53,888 bp · −
psbJ · NC_067743.1 · 63,334–63,456 bp · −
psbL · NC_067743.1 · 63,586–63,702 bp · −
psbF · NC_067743.1 · 63,726–63,845 bp · −
psbE · NC_067743.1 · 63,860–64,111 bp · −
trnW-CCA · NC_067743.1 · 65,420–65,493 bp · −
trnP-UGG · NC_067743.1 · 65,664–65,737 bp · −
rpl20 · NC_067743.1 · 67,512–67,898 bp · −
rps12 · NC_067743.1 · 68,710–68,823 bp · −
rps12 · NC_067743.1 · 96,081–96,864 bp · −
clpP · NC_067743.1 · 68,947–70,858 bp · −
psbN · NC_067743.1 · 73,181–73,312 bp · −
rpoA · NC_067743.1 · 76,688–77,695 bp · −
rps11 · NC_067743.1 · 77,767–78,183 bp · −
rpl36 · NC_067743.1 · 78,293–78,406 bp · −
infA · NC_067743.1 · 78,502–78,735 bp · −
rps8 · NC_067743.1 · 78,862–79,266 bp · −
rpl14 · NC_067743.1 · 79,456–79,824 bp · −
rpl16 · NC_067743.1 · 79,956–81,237 bp · −
rps3 · NC_067743.1 · 81,373–82,035 bp · −
rpl22 · NC_067743.1 · 82,020–82,487 bp · −
rps19 · NC_067743.1 · 82,557–82,835 bp · −
rpl2 · NC_067743.1 · 82,895–84,377 bp · −
rpl23 · NC_067743.1 · 84,396–84,677 bp · −
trnI-CAU · NC_067743.1 · 84,843–84,916 bp · −
trnL-CAA · NC_067743.1 · 92,438–92,518 bp · −
ndhB · NC_067743.1 · 93,078–95,231 bp · −
rps7 · NC_067743.1 · 95,560–96,027 bp · −
trnN-GUU · NC_067743.1 · 106,857–106,928 bp · −
ndhF · NC_067743.1 · 108,282–110,516 bp · −
ndhD · NC_067743.1 · 113,206–114,747 bp · −
psaC · NC_067743.1 · 114,858–115,103 bp · −
ndhE · NC_067743.1 · 115,354–115,656 bp · −
ndhG · NC_067743.1 · 115,875–116,405 bp · −
ndhI · NC_067743.1 · 116,782–117,288 bp · −
ndhA · NC_067743.1 · 117,369–119,445 bp · −
ndhH · NC_067743.1 · 119,447–120,682 bp · −
rps15 · NC_067743.1 · 120,728–121,000 bp · −
ycf1 · NC_067743.1 · 121,426–127,053 bp · −
trnR-ACG · NC_067743.1 · 127,863–127,936 bp · −
rrn5 · NC_067743.1 · 128,180–128,300 bp · −
rrn4.5 · NC_067743.1 · 128,525–128,627 bp · −
rrn23 · NC_067743.1 · 128,728–131,536 bp · −
trnA-UGC · NC_067743.1 · 131,702–132,569 bp · −
trnI-GAU · NC_067743.1 · 132,634–133,645 bp · −
rrn16 · NC_067743.1 · 133,944–135,434 bp · −
trnV-GAC · NC_067743.1 · 135,661–135,732 bp · −
ycf15 · NC_067743.1 · 142,023–142,271 bp · −
ycf2 · NC_067743.1 · 142,362–149,195 bp · −
psbK · NC_067743.1 · 7,379–7,558 bp · +
psbI · NC_067743.1 · 7,955–8,065 bp · +
trnG-UCC · NC_067743.1 · 9,008–9,760 bp · +
trnR-UCU · NC_067743.1 · 9,945–10,016 bp · +
trnC-GCA · NC_067743.1 · 27,915–27,985 bp · +
petN · NC_067743.1 · 28,148–28,237 bp · +
trnT-GGU · NC_067743.1 · 30,802–30,873 bp · +
psbD · NC_067743.1 · 32,253–33,314 bp · +
psbC · NC_067743.1 · 33,262–34,683 bp · +
psbZ · NC_067743.1 · 35,356–35,544 bp · +
trnG-GCC · NC_067743.1 · 35,816–35,886 bp · +
trnS-GGA · NC_067743.1 · 44,730–44,816 bp · +
trnL-UAA · NC_067743.1 · 46,818–47,357 bp · +
trnF-GAA · NC_067743.1 · 47,656–47,728 bp · +
trnM-CAU · NC_067743.1 · 51,726–51,798 bp · +
rbcL · NC_067743.1 · 54,652–56,106 bp · +
accD · NC_067743.1 · 56,797–58,284 bp · +
psaI · NC_067743.1 · 58,747–58,857 bp · +
ycf4 · NC_067743.1 · 59,312–59,866 bp · +
cemA · NC_067743.1 · 60,414–61,103 bp · +
petA · NC_067743.1 · 61,309–62,271 bp · +
petL · NC_067743.1 · 64,918–65,013 bp · +
petG · NC_067743.1 · 65,192–65,305 bp · +
psaJ · NC_067743.1 · 65,989–66,162 bp · +
rpl33 · NC_067743.1 · 66,614–66,814 bp · +
rps18 · NC_067743.1 · 66,975–67,280 bp · +
rps12 · NC_067743.1 · 137,336–138,119 bp · +
psbB · NC_067743.1 · 71,307–72,833 bp · +
psbT · NC_067743.1 · 73,013–73,120 bp · +
psbH · NC_067743.1 · 73,418–73,639 bp · +
petB · NC_067743.1 · 73,765–75,115 bp · +
petD · NC_067743.1 · 75,309–76,511 bp · +
ycf2 · NC_067743.1 · 85,005–91,838 bp · +
ycf15 · NC_067743.1 · 91,929–92,177 bp · +
trnV-GAC · NC_067743.1 · 98,468–98,539 bp · +
rrn16 · NC_067743.1 · 98,766–100,256 bp · +
trnI-GAU · NC_067743.1 · 100,555–101,566 bp · +
trnA-UGC · NC_067743.1 · 101,631–102,498 bp · +
rrn23 · NC_067743.1 · 102,664–105,472 bp · +
rrn4.5 · NC_067743.1 · 105,573–105,675 bp · +
rrn5 · NC_067743.1 · 105,900–106,020 bp · +
trnR-ACG · NC_067743.1 · 106,264–106,337 bp · +
ycf1 · NC_067743.1 · 107,147–108,313 bp · +
rpl32 · NC_067743.1 · 110,950–111,120 bp · +
trnL-UAG · NC_067743.1 · 111,825–111,904 bp · +
ccsA · NC_067743.1 · 111,949–112,974 bp · +
trnN-GUU · NC_067743.1 · 127,272–127,343 bp · +
rps7 · NC_067743.1 · 138,173–138,640 bp · +
ndhB · NC_067743.1 · 138,969–141,122 bp · +
trnL-CAA · NC_067743.1 · 141,682–141,762 bp · +
trnI-CAU · NC_067743.1 · 149,284–149,357 bp · +
rpl23 · NC_067743.1 · 149,523–149,804 bp · +
rpl2 · NC_067743.1 · 149,823–151,305 bp · +
rps19 · NC_067743.1 · 151,365–151,406 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia scapiformis
ANNOTATED PLASTOME
NC_067743.1
151,407 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37852 75704 113555 151407 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4266 2594 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4835 5945 1111 Locate
trnQ-UUG gene − 6915 6986 72 Locate
psbK gene + 7379 7558 180 Locate
psbI gene + 7955 8065 111 Locate
trnS-GCU gene − 8230 8317 88 Locate
trnG-UCC gene + 9008 9760 753 Locate
trnR-UCU gene + 9945 10016 72 Locate
atpA gene − 10128 11651 1524 Locate
atpF gene − 11748 12995 1248 Locate
atpH gene − 13268 13513 246 Locate
atpI gene − 14484 15227 744 Locate
rps2 gene − 15454 16164 711 Locate
rpoC2 gene − 16373 20560 4188 Locate
rpoC1 gene − 20718 23531 2814 Locate
rpoB gene − 23558 26770 3213 Locate
trnC-GCA gene + 27915 27985 71 Locate
petN gene + 28148 28237 90 Locate
psbM gene − 29214 29318 105 Locate
trnD-GUC gene − 29839 29912 74 Locate
trnY-GUA gene − 30023 30106 84 Locate
trnE-UUC gene − 30178 30250 73 Locate
trnT-GGU gene + 30802 30873 72 Locate
psbD gene + 32253 33314 1062 Locate
psbC gene + 33262 34683 1422 Locate
trnS-UGA gene − 34929 35021 93 Locate
psbZ gene + 35356 35544 189 Locate
trnG-GCC gene + 35816 35886 71 Locate
trnfM-CAU gene − 36066 36139 74 Locate
rps14 gene − 36284 36586 303 Locate
psaB gene − 36709 38913 2205 Locate
psaA gene − 38939 41191 2253 Locate
ycf3 gene − 41982 43913 1932 Locate
trnS-GGA gene + 44730 44816 87 Locate
rps4 gene − 45093 45698 606 Locate
trnT-UGU gene − 46070 46142 73 Locate
trnL-UAA gene + 46818 47357 540 Locate
trnF-GAA gene + 47656 47728 73 Locate
ndhJ gene − 48261 48737 477 Locate
ndhK gene − 48848 49525 678 Locate
ndhC gene − 49577 49939 363 Locate
trnV-UAC gene − 50889 51537 649 Locate
trnM-CAU gene + 51726 51798 73 Locate
atpE gene − 51994 52395 402 Locate
atpB gene − 52392 53888 1497 Locate
rbcL gene + 54652 56106 1455 Locate
accD gene + 56797 58284 1488 Locate
psaI gene + 58747 58857 111 Locate
ycf4 gene + 59312 59866 555 Locate
cemA gene + 60414 61103 690 Locate
petA gene + 61309 62271 963 Locate
psbJ gene − 63334 63456 123 Locate
psbL gene − 63586 63702 117 Locate
psbF gene − 63726 63845 120 Locate
psbE gene − 63860 64111 252 Locate
petL gene + 64918 65013 96 Locate
petG gene + 65192 65305 114 Locate
trnW-CCA gene − 65420 65493 74 Locate
trnP-UGG gene − 65664 65737 74 Locate
psaJ gene + 65989 66162 174 Locate
rpl33 gene + 66614 66814 201 Locate
rps18 gene + 66975 67280 306 Locate
rpl20 gene − 67512 67898 387 Locate
rps12 gene − 68710 68823 114 Locate
clpP gene − 68947 70858 1912 Locate
psbB gene + 71307 72833 1527 Locate
psbT gene + 73013 73120 108 Locate
psbN gene − 73181 73312 132 Locate
psbH gene + 73418 73639 222 Locate
petB gene + 73765 75115 1351 Locate
petD gene + 75309 76511 1203 Locate
rpoA gene − 76688 77695 1008 Locate
rps11 gene − 77767 78183 417 Locate
rpl36 gene − 78293 78406 114 Locate
infA gene − 78502 78735 234 Locate
rps8 gene − 78862 79266 405 Locate
rpl14 gene − 79456 79824 369 Locate
rpl16 gene − 79956 81237 1282 Locate
rps3 gene − 81373 82035 663 Locate
rpl22 gene − 82020 82487 468 Locate
rps19 gene − 82557 82835 279 Locate
rpl2 gene − 82895 84377 1483 Locate
rpl23 gene − 84396 84677 282 Locate
trnI-CAU gene − 84843 84916 74 Locate
ycf2 gene + 85005 91838 6834 Locate
ycf15 gene + 91929 92177 249 Locate
trnL-CAA gene − 92438 92518 81 Locate
ndhB gene − 93078 95231 2154 Locate
rps7 gene − 95560 96027 468 Locate
rps12 gene − 96081 96864 784 Locate
trnV-GAC gene + 98468 98539 72 Locate
rrn16 gene + 98766 100256 1491 Locate
trnI-GAU gene + 100555 101566 1012 Locate
trnA-UGC gene + 101631 102498 868 Locate
rrn23 gene + 102664 105472 2809 Locate
rrn4.5 gene + 105573 105675 103 Locate
rrn5 gene + 105900 106020 121 Locate
trnR-ACG gene + 106264 106337 74 Locate
trnN-GUU gene − 106857 106928 72 Locate
ycf1 gene + 107147 108313 1167 Locate
ndhF gene − 108282 110516 2235 Locate
rpl32 gene + 110950 111120 171 Locate
trnL-UAG gene + 111825 111904 80 Locate
ccsA gene + 111949 112974 1026 Locate
ndhD gene − 113206 114747 1542 Locate
psaC gene − 114858 115103 246 Locate
ndhE gene − 115354 115656 303 Locate
ndhG gene − 115875 116405 531 Locate
ndhI gene − 116782 117288 507 Locate
ndhA gene − 117369 119445 2077 Locate
ndhH gene − 119447 120682 1236 Locate
rps15 gene − 120728 121000 273 Locate
ycf1 gene − 121426 127053 5628 Locate
trnN-GUU gene + 127272 127343 72 Locate
trnR-ACG gene − 127863 127936 74 Locate
rrn5 gene − 128180 128300 121 Locate
rrn4.5 gene − 128525 128627 103 Locate
rrn23 gene − 128728 131536 2809 Locate
trnA-UGC gene − 131702 132569 868 Locate
trnI-GAU gene − 132634 133645 1012 Locate
rrn16 gene − 133944 135434 1491 Locate
trnV-GAC gene − 135661 135732 72 Locate
rps12 gene + 137336 138119 784 Locate
rps7 gene + 138173 138640 468 Locate
ndhB gene + 138969 141122 2154 Locate
trnL-CAA gene + 141682 141762 81 Locate
ycf15 gene − 142023 142271 249 Locate
ycf2 gene − 142362 149195 6834 Locate
trnI-CAU gene + 149284 149357 74 Locate
rpl23 gene + 149523 149804 282 Locate
rpl2 gene + 149823 151305 1483 Locate
rps19 gene + 151365 151406 42 Locate
Status Available
Accession NC_067743.1
Length 151,407 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources