Coordinate-aware organelle record

Salvia semiatrata chloroplast genome

Available MT156370.1 151,036 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1684	4250	2566
matK	gene	other	−	1988	3512	1524
rps16	gene	ribosomal-protein	−	4819	5924	1105
trnQ-UUG	gene	translation-rna	−	6678	6750	72
psbK	gene	photosystem-ii	+	7139	7325	186
psbI	gene	photosystem-ii	+	7717	7828	111
trnS-GCU	gene	translation-rna	−	7976	8064	88
trnG-UCC	gene	translation-rna	+	8768	9529	761
trnR-UCU	gene	translation-rna	+	9705	9777	72
atpA	gene	atp-synthase	−	9887	11411	1524
atpF	gene	atp-synthase	−	11510	12771	1261
atpH	gene	atp-synthase	−	13044	13290	246
atpI	gene	atp-synthase	−	14301	15045	744
rps2	gene	ribosomal-protein	−	15271	15982	711
rpoC2	gene	rna-polymerase	−	16183	20371	4188
rpoC1	gene	rna-polymerase	−	20536	23369	2833
rpoB	gene	rna-polymerase	−	23374	26587	3213
trnC-GCA	gene	translation-rna	+	27746	27817	71
petN	gene	cytochrome	+	27972	28062	90
psbM	gene	photosystem-ii	−	29050	29155	105
trnD-GUC	gene	translation-rna	−	29525	29599	74
trnY-GUA	gene	translation-rna	−	29711	29795	84
trnE-UUC	gene	translation-rna	−	29865	29938	73
trnT-GGU	gene	translation-rna	+	30479	30551	72
psbD	gene	photosystem-ii	+	31923	32985	1062
psbC	gene	photosystem-ii	+	32932	34354	1422
trnS-UGA	gene	translation-rna	−	34593	34686	93
psbZ	gene	photosystem-ii	+	35013	35202	189
trnG-GCC	gene	translation-rna	+	35479	35550	71
trnfM-CAU	gene	translation-rna	−	35706	35780	74
rps14	gene	ribosomal-protein	−	35924	36227	303
psaB	gene	photosystem-i	−	36349	38554	2205
psaA	gene	photosystem-i	−	38579	40832	2253
ycf3	gene	other	−	41562	43498	1936
trnS-GGA	gene	translation-rna	+	44323	44410	87
rps4	gene	ribosomal-protein	−	44687	45293	606
trnT-UGU	gene	translation-rna	−	45652	45725	73
trnL-UAA	gene	translation-rna	+	46391	46966	575
trnF-GAA	gene	translation-rna	+	47253	47326	73
ndhJ	gene	nad-dehydrogenase	−	47802	48279	477
ndhK	gene	nad-dehydrogenase	−	48389	49067	678
ndhC	gene	nad-dehydrogenase	−	49118	49481	363
trnV-UAC	gene	translation-rna	−	50285	50931	646
trnM-CAU	gene	translation-rna	+	51111	51184	73
atpE	gene	atp-synthase	−	51373	51775	402
atpB	gene	atp-synthase	−	51771	53268	1497
rbcL	gene	other	+	54069	55503	1434
accD	gene	other	+	56174	57644	1470
psaI	gene	photosystem-i	+	58107	58218	111
ycf4	gene	other	+	58662	59217	555
cemA	gene	other	+	59858	60548	690
petA	gene	cytochrome	+	60769	61732	963
psbJ	gene	photosystem-ii	−	62740	62863	123
psbL	gene	photosystem-ii	−	62992	63109	117
psbF	gene	photosystem-ii	−	63132	63252	120
psbE	gene	photosystem-ii	−	63266	63518	252
petL	gene	cytochrome	+	64425	64521	96
petG	gene	cytochrome	+	64699	64813	114
trnW-CCA	gene	translation-rna	−	64927	65001	74
trnP-UGG	gene	translation-rna	−	65175	65249	74
psaJ	gene	photosystem-i	+	65528	65663	135
rpl33	gene	ribosomal-protein	+	66101	66302	201
rps18	gene	ribosomal-protein	+	66474	66780	306
rpl20	gene	ribosomal-protein	−	67015	67402	387
rps12	gene	ribosomal-protein	−	68208	96370	28162
rps12	gene	ribosomal-protein	+	68208	137786	69578
clpP	gene	other	−	68445	70354	1909
psbB	gene	photosystem-ii	+	70798	72325	1527
psbT	gene	photosystem-ii	+	72516	72618	102
psbN	gene	photosystem-ii	−	72683	72815	132
psbH	gene	photosystem-ii	+	72920	73142	222
petB	gene	cytochrome	+	73275	74638	1363
petD	gene	cytochrome	+	74825	76010	1185
rpoA	gene	rna-polymerase	−	76186	77194	1008
rps11	gene	ribosomal-protein	−	77263	77680	417
rpl36	gene	ribosomal-protein	−	77791	77905	114
infA	gene	other	−	78000	78234	234
rps8	gene	ribosomal-protein	−	78356	78761	405
rpl14	gene	ribosomal-protein	−	78935	79304	369
rpl16	gene	ribosomal-protein	−	79434	80710	1276
rps3	gene	ribosomal-protein	−	80852	81515	663
rpl22	gene	ribosomal-protein	−	81499	81967	468
rps19	gene	ribosomal-protein	−	82036	82315	279
rpl2	gene	ribosomal-protein	−	82375	83867	1492
rpl23	gene	ribosomal-protein	−	83885	84167	282
trnI-CAU	gene	translation-rna	−	84332	84406	74
ycf2	gene	other	+	84494	91334	6840
ycf15	gene	other	+	91424	91673	249
trnL-CAA	gene	translation-rna	−	91933	92014	81
ndhB	gene	nad-dehydrogenase	−	92573	94727	2154
rps7	gene	ribosomal-protein	−	95055	95523	468
trnV-GAC	gene	translation-rna	+	98043	98115	72
rrn16	gene	ribosomal-rna	+	98341	99832	1491
trnI-GAU	gene	translation-rna	+	100130	101149	1019
trnA-UGC	gene	translation-rna	+	101213	102090	877
rrn23	gene	ribosomal-rna	+	102255	105066	2811
rrn4.5	gene	ribosomal-rna	+	105164	105267	103
rrn5	gene	ribosomal-rna	+	105522	105643	121
trnR-ACG	gene	translation-rna	+	105886	105960	74
trnN-GUU	gene	translation-rna	−	106462	106534	72
ycf1	gene	other	+	106863	107913	1050
ndhF	gene	nad-dehydrogenase	−	107881	110113	2232
rpl32	gene	ribosomal-protein	+	110569	110740	171
trnL-UAG	gene	translation-rna	+	111388	111468	80
ccsA	gene	other	+	111564	112542	978
ndhD	gene	nad-dehydrogenase	−	112780	114322	1542
psaC	gene	photosystem-i	−	114416	114662	246
ndhE	gene	nad-dehydrogenase	−	114912	115218	306
ndhG	gene	nad-dehydrogenase	−	115430	115961	531
ndhI	gene	nad-dehydrogenase	−	116323	116830	507
ndhA	gene	nad-dehydrogenase	−	116910	119012	2102
ndhH	gene	nad-dehydrogenase	−	119013	120195	1182
rps15	gene	ribosomal-protein	−	120294	120567	273
ycf1	gene	other	−	120973	126499	5526
trnN-GUU	gene	translation-rna	+	126828	126900	72
trnR-ACG	gene	translation-rna	−	127402	127476	74
rrn5	gene	ribosomal-rna	−	127719	127840	121
rrn4.5	gene	ribosomal-rna	−	128095	128198	103
rrn23	gene	ribosomal-rna	−	128296	131107	2811
trnA-UGC	gene	translation-rna	−	131272	132149	877
trnI-GAU	gene	translation-rna	−	132213	133232	1019
rrn16	gene	ribosomal-rna	−	133530	135021	1491
trnV-GAC	gene	translation-rna	−	135247	135319	72
rps7	gene	ribosomal-protein	+	137839	138307	468
ndhB	gene	nad-dehydrogenase	+	138635	140789	2154
trnL-CAA	gene	translation-rna	+	141348	141429	81
ycf15	gene	other	−	141689	141938	249
ycf2	gene	other	−	142028	148868	6840
trnI-CAU	gene	translation-rna	+	148956	149030	74
rpl23	gene	ribosomal-protein	+	149195	149477	282
rpl2	gene	ribosomal-protein	+	149495	150987	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMT156370.1DNA · accDMT156370DNA · atpBMT156370DNA · matKMT156370DNA · ndhFMT156370DNA · psbAMT156370DNA · rbcLMT156370DNA · rps12MT156370DNA · ycf1MT156370