Coordinate-aware organelle record

Salvia sikkimensis chloroplast genome

Available NC_071851.1 151,104 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	15	89	74
psbA	gene	photosystem-ii	−	397	1456	1059
trnK-UUU	gene	translation-rna	−	1687	4290	2603
matK	gene	other	−	1995	3558	1563
rps16	gene	ribosomal-protein	−	4855	5974	1119
trnQ-UUG	gene	translation-rna	−	6876	6948	72
psbK	gene	photosystem-ii	+	7310	7490	180
psbI	gene	photosystem-ii	+	7883	7994	111
trnS-GCU	gene	translation-rna	−	8137	8225	88
trnG-UCC	gene	translation-rna	+	8907	9663	756
trnR-UCU	gene	translation-rna	+	9844	9916	72
atpA	gene	atp-synthase	−	10021	11545	1524
atpF	gene	atp-synthase	−	11647	12891	1244
atpH	gene	atp-synthase	−	13156	13402	246
atpI	gene	atp-synthase	−	14399	15143	744
rps2	gene	ribosomal-protein	−	15368	16079	711
rpoC2	gene	rna-polymerase	−	16286	20471	4185
rpoC1	gene	rna-polymerase	−	20628	23470	2842
rpoB	gene	rna-polymerase	−	23475	26688	3213
trnC-GCA	gene	translation-rna	+	27851	27922	71
petN	gene	cytochrome	+	28085	28175	90
psbM	gene	photosystem-ii	−	29150	29255	105
trnD-GUC	gene	translation-rna	−	29773	29847	74
trnY-GUA	gene	translation-rna	−	29957	30041	84
trnE-UUC	gene	translation-rna	−	30112	30185	73
trnT-GGU	gene	translation-rna	+	30723	30795	72
psbD	gene	photosystem-ii	+	32047	33109	1062
psbC	gene	photosystem-ii	+	33056	34478	1422
trnS-UGA	gene	translation-rna	−	34724	34817	93
psbZ	gene	photosystem-ii	+	35142	35331	189
trnG-GCC	gene	translation-rna	+	35609	35680	71
trnfM-CAU	gene	translation-rna	−	35860	35934	74
rps14	gene	ribosomal-protein	−	36078	36381	303
psaB	gene	photosystem-i	−	36503	38708	2205
psaA	gene	photosystem-i	−	38733	40986	2253
ycf3	gene	other	−	41739	43667	1928
trnS-GGA	gene	translation-rna	+	44484	44571	87
rps4	gene	ribosomal-protein	−	44847	45453	606
trnT-UGU	gene	translation-rna	−	45783	45856	73
trnL-UAA	gene	translation-rna	+	46526	47066	540
trnF-GAA	gene	translation-rna	+	47364	47437	73
ndhJ	gene	nad-dehydrogenase	−	47970	48447	477
ndhK	gene	nad-dehydrogenase	−	48557	49235	678
ndhC	gene	nad-dehydrogenase	−	49286	49649	363
trnV-UAC	gene	translation-rna	−	50593	51242	649
trnM-CAU	gene	translation-rna	+	51430	51503	73
atpE	gene	atp-synthase	−	51714	52116	402
atpB	gene	atp-synthase	−	52112	53609	1497
rbcL	gene	other	+	54394	55828	1434
accD	gene	other	+	56501	57983	1482
psaI	gene	photosystem-i	+	58432	58543	111
ycf4	gene	other	+	58981	59536	555
cemA	gene	other	+	60189	60879	690
petA	gene	cytochrome	+	61111	62074	963
psbJ	gene	photosystem-ii	−	63032	63155	123
psbL	gene	photosystem-ii	−	63284	63401	117
psbF	gene	photosystem-ii	−	63424	63544	120
psbE	gene	photosystem-ii	−	63558	63810	252
petL	gene	cytochrome	+	64616	64712	96
petG	gene	cytochrome	+	64875	64989	114
trnW-CCA	gene	translation-rna	−	65103	65177	74
trnP-UGG	gene	translation-rna	−	65358	65432	74
psaJ	gene	photosystem-i	+	65693	65828	135
rpl33	gene	ribosomal-protein	+	66225	66426	201
rps18	gene	ribosomal-protein	+	66598	66904	306
rpl20	gene	ribosomal-protein	−	67108	67495	387
rps12	gene	ribosomal-protein	−	68272	96461	28189
rps12	gene	ribosomal-protein	+	68272	137796	69524
clpP	gene	other	−	68514	70413	1899
psbB	gene	photosystem-ii	+	70855	72382	1527
psbT	gene	photosystem-ii	+	72562	72670	108
psbN	gene	photosystem-ii	−	72730	72862	132
psbH	gene	photosystem-ii	+	72975	73197	222
petB	gene	cytochrome	+	73329	74689	1360
petD	gene	cytochrome	+	74876	76073	1197
rpoA	gene	rna-polymerase	−	76249	77257	1008
rps11	gene	ribosomal-protein	−	77331	77748	417
rpl36	gene	ribosomal-protein	−	77857	77971	114
infA	gene	other	−	78066	78300	234
rps8	gene	ribosomal-protein	−	78427	78832	405
rpl14	gene	ribosomal-protein	−	79018	79387	369
rpl16	gene	ribosomal-protein	−	79518	80796	1278
rps3	gene	ribosomal-protein	−	80940	81603	663
rpl22	gene	ribosomal-protein	−	81587	82055	468
rps19	gene	ribosomal-protein	−	82129	82408	279
rpl2	gene	ribosomal-protein	−	82469	83952	1483
rpl23	gene	ribosomal-protein	−	83970	84252	282
trnI-CAU	gene	translation-rna	−	84417	84491	74
ycf2	gene	other	+	84579	91422	6843
ycf15	gene	other	+	91512	91761	249
trnL-CAA	gene	translation-rna	−	92021	92102	81
ndhB	gene	nad-dehydrogenase	−	92674	94828	2154
rps7	gene	ribosomal-protein	−	95156	95624	468
trnV-GAC	gene	translation-rna	+	98070	98142	72
rrn16	gene	ribosomal-rna	+	98368	99859	1491
trnI-GAU	gene	translation-rna	+	100157	101170	1013
trnA-UGC	gene	translation-rna	+	101234	102111	877
rrn23	gene	ribosomal-rna	+	102276	105087	2811
rrn4.5	gene	ribosomal-rna	+	105185	105288	103
rrn5	gene	ribosomal-rna	+	105543	105664	121
trnR-ACG	gene	translation-rna	+	105907	105981	74
trnN-GUU	gene	translation-rna	−	106500	106572	72
ycf1	gene	other	+	106901	108059	1158
ndhF	gene	nad-dehydrogenase	−	107925	110142	2217
rpl32	gene	ribosomal-protein	+	110578	110749	171
trnL-UAG	gene	translation-rna	+	111456	111536	80
ccsA	gene	other	+	111628	112606	978
ndhD	gene	nad-dehydrogenase	−	112837	114238	1401
psaC	gene	photosystem-i	−	114473	114719	246
ndhE	gene	nad-dehydrogenase	−	114969	115275	306
ndhG	gene	nad-dehydrogenase	−	115489	116020	531
ndhI	gene	nad-dehydrogenase	−	116402	116909	507
ndhA	gene	nad-dehydrogenase	−	116989	119084	2095
ndhH	gene	nad-dehydrogenase	−	119085	120267	1182
rps15	gene	ribosomal-protein	−	120366	120639	273
ycf1	gene	other	−	121046	126572	5526
trnN-GUU	gene	translation-rna	+	126901	126973	72
trnR-ACG	gene	translation-rna	−	127492	127566	74
rrn5	gene	ribosomal-rna	−	127809	127930	121
rrn4.5	gene	ribosomal-rna	−	128185	128288	103
rrn23	gene	ribosomal-rna	−	128386	131197	2811
trnA-UGC	gene	translation-rna	−	131362	132239	877
trnI-GAU	gene	translation-rna	−	132303	133316	1013
rrn16	gene	ribosomal-rna	−	133614	135105	1491
trnV-GAC	gene	translation-rna	−	135331	135403	72
rps7	gene	ribosomal-protein	+	137849	138317	468
ndhB	gene	nad-dehydrogenase	+	138645	140799	2154
trnL-CAA	gene	translation-rna	+	141371	141452	81
ycf15	gene	other	−	141712	141961	249
ycf2	gene	other	−	142051	148894	6843
trnI-CAU	gene	translation-rna	+	148982	149056	74
rpl23	gene	ribosomal-protein	+	149221	149503	282
rpl2	gene	ribosomal-protein	+	149521	151004	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_071851.1DNA · accDNC_071851DNA · atpBNC_071851DNA · matKNC_071851DNA · ndhFNC_071851DNA · psbANC_071851DNA · rbcLNC_071851DNA · rps12NC_071851DNA · ycf1NC_071851