Salvia splendens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_050901.1 · 2–75 bp · −
psbA · NC_050901.1 · 395–1,453 bp · −
trnK-UUU · NC_050901.1 · 1,685–4,250 bp · −
matK · NC_050901.1 · 1,989–3,524 bp · −
rps16 · NC_050901.1 · 4,819–5,917 bp · −
trnQ-UUG · NC_050901.1 · 6,674–6,745 bp · −
trnS-GCU · NC_050901.1 · 7,975–8,062 bp · −
atpA · NC_050901.1 · 9,886–11,409 bp · −
atpF · NC_050901.1 · 11,506–12,764 bp · −
atpH · NC_050901.1 · 13,038–13,283 bp · −
atpI · NC_050901.1 · 14,295–15,038 bp · −
rps2 · NC_050901.1 · 15,262–15,972 bp · −
rpoC2 · NC_050901.1 · 16,174–20,361 bp · −
rpoC1 · NC_050901.1 · 20,528–23,339 bp · −
rpoB · NC_050901.1 · 23,366–26,578 bp · −
psbM · NC_050901.1 · 29,040–29,144 bp · −
trnD-GUC · NC_050901.1 · 29,515–29,588 bp · −
trnY-GUA · NC_050901.1 · 29,701–29,784 bp · −
trnE-UUC · NC_050901.1 · 29,854–29,926 bp · −
trnS-UGA · NC_050901.1 · 34,556–34,648 bp · −
trnfM-CAU · NC_050901.1 · 35,670–35,743 bp · −
rps14 · NC_050901.1 · 35,888–36,190 bp · −
psaB · NC_050901.1 · 36,313–38,517 bp · −
psaA · NC_050901.1 · 38,543–40,795 bp · −
ycf3 · NC_050901.1 · 41,526–43,464 bp · −
rps4 · NC_050901.1 · 44,654–45,259 bp · −
trnT-UGU · NC_050901.1 · 45,617–45,689 bp · −
ndhJ · NC_050901.1 · 47,754–48,230 bp · −
ndhK · NC_050901.1 · 48,341–49,018 bp · −
ndhC · NC_050901.1 · 49,070–49,432 bp · −
trnV-UAC · NC_050901.1 · 50,236–50,881 bp · −
atpE · NC_050901.1 · 51,324–51,725 bp · −
atpB · NC_050901.1 · 51,722–53,218 bp · −
psbJ · NC_050901.1 · 62,650–62,772 bp · −
psbL · NC_050901.1 · 62,902–63,018 bp · −
psbF · NC_050901.1 · 63,042–63,161 bp · −
psbE · NC_050901.1 · 63,176–63,427 bp · −
trnW-CCA · NC_050901.1 · 64,829–64,902 bp · −
trnP-UGG · NC_050901.1 · 65,077–65,150 bp · −
rpl20 · NC_050901.1 · 66,914–67,300 bp · −
rps12 · NC_050901.1 · 68,105–68,218 bp · −
rps12 · NC_050901.1 · 95,467–96,260 bp · −
clpP · NC_050901.1 · 68,342–70,250 bp · −
psbN · NC_050901.1 · 72,579–72,710 bp · −
rpoA · NC_050901.1 · 76,081–77,088 bp · −
rps11 · NC_050901.1 · 77,158–77,574 bp · −
rpl36 · NC_050901.1 · 77,686–77,799 bp · −
infA · NC_050901.1 · 77,895–78,128 bp · −
rps8 · NC_050901.1 · 78,250–78,654 bp · −
rpl14 · NC_050901.1 · 78,826–79,194 bp · −
rpl16 · NC_050901.1 · 79,325–80,600 bp · −
rps3 · NC_050901.1 · 80,743–81,405 bp · −
rpl22 · NC_050901.1 · 81,390–81,857 bp · −
rps19 · NC_050901.1 · 81,927–82,205 bp · −
rpl2 · NC_050901.1 · 82,266–83,757 bp · −
rpl23 · NC_050901.1 · 83,776–84,057 bp · −
trnI-CAU · NC_050901.1 · 84,223–84,296 bp · −
trnL-CAA · NC_050901.1 · 91,824–91,904 bp · −
ndhB · NC_050901.1 · 92,464–94,617 bp · −
rps7 · NC_050901.1 · 94,946–95,413 bp · −
trnN-GUU · NC_050901.1 · 106,311–106,382 bp · −
ndhF · NC_050901.1 · 107,442–109,670 bp · −
ndhD · NC_050901.1 · 112,357–113,898 bp · −
psaC · NC_050901.1 · 113,992–114,237 bp · −
ndhE · NC_050901.1 · 114,488–114,790 bp · −
ndhG · NC_050901.1 · 115,006–115,536 bp · −
ndhI · NC_050901.1 · 115,901–116,407 bp · −
ndhA · NC_050901.1 · 116,488–118,588 bp · −
ndhH · NC_050901.1 · 118,590–119,831 bp · −
rps15 · NC_050901.1 · 119,871–120,143 bp · −
ycf1 · NC_050901.1 · 120,549–126,185 bp · −
trnR-ACG · NC_050901.1 · 126,978–127,051 bp · −
rrn5 · NC_050901.1 · 127,295–127,415 bp · −
rrn4.5 · NC_050901.1 · 127,671–127,773 bp · −
rrn23 · NC_050901.1 · 127,874–130,682 bp · −
trnA-UGC · NC_050901.1 · 130,848–131,724 bp · −
trnI-GAU · NC_050901.1 · 131,789–132,807 bp · −
rrn16 · NC_050901.1 · 133,106–134,596 bp · −
trnV-GAC · NC_050901.1 · 134,823–134,894 bp · −
ycf15 · NC_050901.1 · 141,223–141,486 bp · −
ycf2 · NC_050901.1 · 141,562–148,401 bp · −
psbK · NC_050901.1 · 7,135–7,320 bp · +
psbI · NC_050901.1 · 7,715–7,825 bp · +
trnG-UCC · NC_050901.1 · 8,766–9,527 bp · +
trnR-UCU · NC_050901.1 · 9,704–9,775 bp · +
trnC-GCA · NC_050901.1 · 27,742–27,812 bp · +
petN · NC_050901.1 · 27,968–28,057 bp · +
trnT-GGU · NC_050901.1 · 30,468–30,539 bp · +
psbD · NC_050901.1 · 31,887–32,948 bp · +
psbC · NC_050901.1 · 32,896–34,317 bp · +
psbZ · NC_050901.1 · 34,976–35,164 bp · +
trnG-GCC · NC_050901.1 · 35,442–35,512 bp · +
trnS-GGA · NC_050901.1 · 44,290–44,376 bp · +
trnL-UAA · NC_050901.1 · 46,350–46,917 bp · +
trnF-GAA · NC_050901.1 · 47,205–47,277 bp · +
trnM-CAU · NC_050901.1 · 51,062–51,134 bp · +
rbcL · NC_050901.1 · 53,999–55,453 bp · +
accD · NC_050901.1 · 56,125–57,552 bp · +
psaI · NC_050901.1 · 58,016–58,126 bp · +
ycf4 · NC_050901.1 · 58,571–59,125 bp · +
cemA · NC_050901.1 · 59,767–60,456 bp · +
petA · NC_050901.1 · 60,678–61,640 bp · +
petL · NC_050901.1 · 64,327–64,422 bp · +
petG · NC_050901.1 · 64,601–64,714 bp · +
psaJ · NC_050901.1 · 65,427–65,561 bp · +
rpl33 · NC_050901.1 · 66,000–66,200 bp · +
rps18 · NC_050901.1 · 66,373–66,678 bp · +
rps12 · NC_050901.1 · 136,526–137,319 bp · +
psbB · NC_050901.1 · 70,695–72,221 bp · +
psbT · NC_050901.1 · 72,412–72,513 bp · +
psbH · NC_050901.1 · 72,798–73,037 bp · +
petB · NC_050901.1 · 73,171–74,533 bp · +
petD · NC_050901.1 · 74,721–75,904 bp · +
ycf2 · NC_050901.1 · 84,385–91,224 bp · +
ycf15 · NC_050901.1 · 91,300–91,563 bp · +
trnV-GAC · NC_050901.1 · 97,892–97,963 bp · +
rrn16 · NC_050901.1 · 98,190–99,680 bp · +
trnI-GAU · NC_050901.1 · 99,979–100,997 bp · +
trnA-UGC · NC_050901.1 · 101,062–101,938 bp · +
rrn23 · NC_050901.1 · 102,104–104,912 bp · +
rrn4.5 · NC_050901.1 · 105,013–105,115 bp · +
rrn5 · NC_050901.1 · 105,371–105,491 bp · +
trnR-ACG · NC_050901.1 · 105,735–105,808 bp · +
rpl32 · NC_050901.1 · 110,127–110,297 bp · +
trnL-UAG · NC_050901.1 · 110,964–111,043 bp · +
ccsA · NC_050901.1 · 111,140–112,117 bp · +
trnN-GUU · NC_050901.1 · 126,404–126,475 bp · +
rps7 · NC_050901.1 · 137,373–137,840 bp · +
ndhB · NC_050901.1 · 138,169–140,322 bp · +
trnL-CAA · NC_050901.1 · 140,882–140,962 bp · +
trnI-CAU · NC_050901.1 · 148,490–148,563 bp · +
rpl23 · NC_050901.1 · 148,729–149,010 bp · +
rpl2 · NC_050901.1 · 149,029–150,520 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia splendens
ANNOTATED PLASTOME
NC_050901.1
150,604 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37651 75302 112953 150604 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 395 1453 1059 Locate
trnK-UUU gene − 1685 4250 2566 Locate
matK gene − 1989 3524 1536 Locate
rps16 gene − 4819 5917 1099 Locate
trnQ-UUG gene − 6674 6745 72 Locate
psbK gene + 7135 7320 186 Locate
psbI gene + 7715 7825 111 Locate
trnS-GCU gene − 7975 8062 88 Locate
trnG-UCC gene + 8766 9527 762 Locate
trnR-UCU gene + 9704 9775 72 Locate
atpA gene − 9886 11409 1524 Locate
atpF gene − 11506 12764 1259 Locate
atpH gene − 13038 13283 246 Locate
atpI gene − 14295 15038 744 Locate
rps2 gene − 15262 15972 711 Locate
rpoC2 gene − 16174 20361 4188 Locate
rpoC1 gene − 20528 23339 2812 Locate
rpoB gene − 23366 26578 3213 Locate
trnC-GCA gene + 27742 27812 71 Locate
petN gene + 27968 28057 90 Locate
psbM gene − 29040 29144 105 Locate
trnD-GUC gene − 29515 29588 74 Locate
trnY-GUA gene − 29701 29784 84 Locate
trnE-UUC gene − 29854 29926 73 Locate
trnT-GGU gene + 30468 30539 72 Locate
psbD gene + 31887 32948 1062 Locate
psbC gene + 32896 34317 1422 Locate
trnS-UGA gene − 34556 34648 93 Locate
psbZ gene + 34976 35164 189 Locate
trnG-GCC gene + 35442 35512 71 Locate
trnfM-CAU gene − 35670 35743 74 Locate
rps14 gene − 35888 36190 303 Locate
psaB gene − 36313 38517 2205 Locate
psaA gene − 38543 40795 2253 Locate
ycf3 gene − 41526 43464 1939 Locate
trnS-GGA gene + 44290 44376 87 Locate
rps4 gene − 44654 45259 606 Locate
trnT-UGU gene − 45617 45689 73 Locate
trnL-UAA gene + 46350 46917 568 Locate
trnF-GAA gene + 47205 47277 73 Locate
ndhJ gene − 47754 48230 477 Locate
ndhK gene − 48341 49018 678 Locate
ndhC gene − 49070 49432 363 Locate
trnV-UAC gene − 50236 50881 646 Locate
trnM-CAU gene + 51062 51134 73 Locate
atpE gene − 51324 51725 402 Locate
atpB gene − 51722 53218 1497 Locate
rbcL gene + 53999 55453 1455 Locate
accD gene + 56125 57552 1428 Locate
psaI gene + 58016 58126 111 Locate
ycf4 gene + 58571 59125 555 Locate
cemA gene + 59767 60456 690 Locate
petA gene + 60678 61640 963 Locate
psbJ gene − 62650 62772 123 Locate
psbL gene − 62902 63018 117 Locate
psbF gene − 63042 63161 120 Locate
psbE gene − 63176 63427 252 Locate
petL gene + 64327 64422 96 Locate
petG gene + 64601 64714 114 Locate
trnW-CCA gene − 64829 64902 74 Locate
trnP-UGG gene − 65077 65150 74 Locate
psaJ gene + 65427 65561 135 Locate
rpl33 gene + 66000 66200 201 Locate
rps18 gene + 66373 66678 306 Locate
rpl20 gene − 66914 67300 387 Locate
rps12 gene − 68105 68218 114 Locate
clpP gene − 68342 70250 1909 Locate
psbB gene + 70695 72221 1527 Locate
psbT gene + 72412 72513 102 Locate
psbN gene − 72579 72710 132 Locate
psbH gene + 72798 73037 240 Locate
petB gene + 73171 74533 1363 Locate
petD gene + 74721 75904 1184 Locate
rpoA gene − 76081 77088 1008 Locate
rps11 gene − 77158 77574 417 Locate
rpl36 gene − 77686 77799 114 Locate
infA gene − 77895 78128 234 Locate
rps8 gene − 78250 78654 405 Locate
rpl14 gene − 78826 79194 369 Locate
rpl16 gene − 79325 80600 1276 Locate
rps3 gene − 80743 81405 663 Locate
rpl22 gene − 81390 81857 468 Locate
rps19 gene − 81927 82205 279 Locate
rpl2 gene − 82266 83757 1492 Locate
rpl23 gene − 83776 84057 282 Locate
trnI-CAU gene − 84223 84296 74 Locate
ycf2 gene + 84385 91224 6840 Locate
ycf15 gene + 91300 91563 264 Locate
trnL-CAA gene − 91824 91904 81 Locate
ndhB gene − 92464 94617 2154 Locate
rps7 gene − 94946 95413 468 Locate
rps12 gene − 95467 96260 794 Locate
trnV-GAC gene + 97892 97963 72 Locate
rrn16 gene + 98190 99680 1491 Locate
trnI-GAU gene + 99979 100997 1019 Locate
trnA-UGC gene + 101062 101938 877 Locate
rrn23 gene + 102104 104912 2809 Locate
rrn4.5 gene + 105013 105115 103 Locate
rrn5 gene + 105371 105491 121 Locate
trnR-ACG gene + 105735 105808 74 Locate
trnN-GUU gene − 106311 106382 72 Locate
ndhF gene − 107442 109670 2229 Locate
rpl32 gene + 110127 110297 171 Locate
trnL-UAG gene + 110964 111043 80 Locate
ccsA gene + 111140 112117 978 Locate
ndhD gene − 112357 113898 1542 Locate
psaC gene − 113992 114237 246 Locate
ndhE gene − 114488 114790 303 Locate
ndhG gene − 115006 115536 531 Locate
ndhI gene − 115901 116407 507 Locate
ndhA gene − 116488 118588 2101 Locate
ndhH gene − 118590 119831 1242 Locate
rps15 gene − 119871 120143 273 Locate
ycf1 gene − 120549 126185 5637 Locate
trnN-GUU gene + 126404 126475 72 Locate
trnR-ACG gene − 126978 127051 74 Locate
rrn5 gene − 127295 127415 121 Locate
rrn4.5 gene − 127671 127773 103 Locate
rrn23 gene − 127874 130682 2809 Locate
trnA-UGC gene − 130848 131724 877 Locate
trnI-GAU gene − 131789 132807 1019 Locate
rrn16 gene − 133106 134596 1491 Locate
trnV-GAC gene − 134823 134894 72 Locate
rps12 gene + 136526 137319 794 Locate
rps7 gene + 137373 137840 468 Locate
ndhB gene + 138169 140322 2154 Locate
trnL-CAA gene + 140882 140962 81 Locate
ycf15 gene − 141223 141486 264 Locate
ycf2 gene − 141562 148401 6840 Locate
trnI-CAU gene + 148490 148563 74 Locate
rpl23 gene + 148729 149010 282 Locate
rpl2 gene + 149029 150520 1492 Locate
Status Available
Accession NC_050901.1
Length 150,604 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources