Salvia subbipinnata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_063913.1 · 11–84 bp · −
psbA · NC_063913.1 · 392–1,450 bp · −
trnK-UUU · NC_063913.1 · 1,672–4,266 bp · −
matK · NC_063913.1 · 1,972–3,534 bp · −
rps16 · NC_063913.1 · 4,834–5,944 bp · −
trnQ-UUG · NC_063913.1 · 6,918–6,989 bp · −
trnS-GCU · NC_063913.1 · 8,210–8,297 bp · −
ATPA · NC_063913.1 · 10,100–11,623 bp · −
ATPF · NC_063913.1 · 11,724–12,969 bp · −
ATPH · NC_063913.1 · 13,243–13,488 bp · −
ATPI · NC_063913.1 · 14,459–15,202 bp · −
rps2 · NC_063913.1 · 15,427–16,137 bp · −
rpoC2 · NC_063913.1 · 16,346–20,533 bp · −
rpoC1 · NC_063913.1 · 20,691–23,504 bp · −
rpoB · NC_063913.1 · 23,531–26,743 bp · −
psbM · NC_063913.1 · 29,189–29,293 bp · −
trnD-GUC · NC_063913.1 · 29,813–29,886 bp · −
trnY-GUA · NC_063913.1 · 29,997–30,080 bp · −
trnE-UUC · NC_063913.1 · 30,152–30,224 bp · −
trnS-UGA · NC_063913.1 · 34,890–34,982 bp · −
trnfM-CAU · NC_063913.1 · 36,027–36,100 bp · −
rps14 · NC_063913.1 · 36,245–36,547 bp · −
psaB · NC_063913.1 · 36,670–38,874 bp · −
psaA · NC_063913.1 · 38,900–41,152 bp · −
ycf3 · NC_063913.1 · 41,936–43,879 bp · −
rps4 · NC_063913.1 · 45,059–45,664 bp · −
trnT-UGU · NC_063913.1 · 46,036–46,108 bp · −
ndhJ · NC_063913.1 · 48,228–48,704 bp · −
ndhK · NC_063913.1 · 48,815–49,492 bp · −
ndhC · NC_063913.1 · 49,544–49,906 bp · −
trnV-UAC · NC_063913.1 · 50,829–51,477 bp · −
ATPE · NC_063913.1 · 51,943–52,344 bp · −
ATPB · NC_063913.1 · 52,341–53,837 bp · −
psbJ · NC_063913.1 · 63,301–63,423 bp · −
psbL · NC_063913.1 · 63,553–63,669 bp · −
psbF · NC_063913.1 · 63,693–63,812 bp · −
psbE · NC_063913.1 · 63,827–64,078 bp · −
trnW-CCA · NC_063913.1 · 65,387–65,460 bp · −
trnP-UGG · NC_063913.1 · 65,631–65,704 bp · −
rpl20 · NC_063913.1 · 67,490–67,876 bp · −
rps12 · NC_063913.1 · 68,692–68,805 bp · −
rps12 · NC_063913.1 · 96,076–96,859 bp · −
clpP · NC_063913.1 · 68,929–70,840 bp · −
psbN · NC_063913.1 · 73,162–73,293 bp · −
rpoA · NC_063913.1 · 76,663–77,670 bp · −
rps11 · NC_063913.1 · 77,742–78,158 bp · −
rpl36 · NC_063913.1 · 78,268–78,381 bp · −
infA · NC_063913.1 · 78,477–78,710 bp · −
rps8 · NC_063913.1 · 78,837–79,241 bp · −
rpl14 · NC_063913.1 · 79,434–79,802 bp · −
rpl16 · NC_063913.1 · 79,934–81,214 bp · −
rps3 · NC_063913.1 · 81,350–82,012 bp · −
rpl22 · NC_063913.1 · 81,997–82,464 bp · −
rps19 · NC_063913.1 · 82,534–82,812 bp · −
rpl2 · NC_063913.1 · 82,872–84,354 bp · −
rpl23 · NC_063913.1 · 84,373–84,654 bp · −
trnI-CAU · NC_063913.1 · 84,820–84,893 bp · −
trnL-CAA · NC_063913.1 · 92,433–92,513 bp · −
ndhB · NC_063913.1 · 93,073–95,226 bp · −
rps7 · NC_063913.1 · 95,555–96,022 bp · −
trnN-GUU · NC_063913.1 · 106,852–106,923 bp · −
ndhF · NC_063913.1 · 108,277–110,511 bp · −
ndhD · NC_063913.1 · 113,171–114,712 bp · −
psaC · NC_063913.1 · 114,822–115,067 bp · −
ndhE · NC_063913.1 · 115,318–115,620 bp · −
ndhG · NC_063913.1 · 115,840–116,370 bp · −
ndhI · NC_063913.1 · 116,766–117,251 bp · −
ndhA · NC_063913.1 · 117,332–119,408 bp · −
ndhH · NC_063913.1 · 119,410–120,645 bp · −
rps15 · NC_063913.1 · 120,691–120,963 bp · −
ycf1 · NC_063913.1 · 121,389–127,016 bp · −
trnR-ACG · NC_063913.1 · 127,826–127,899 bp · −
rrn5 · NC_063913.1 · 128,143–128,263 bp · −
rrn4.5 · NC_063913.1 · 128,488–128,590 bp · −
rrn23 · NC_063913.1 · 128,691–131,499 bp · −
trnA-UGC · NC_063913.1 · 131,665–132,532 bp · −
trnI-GAU · NC_063913.1 · 132,597–133,608 bp · −
rrn16 · NC_063913.1 · 133,907–135,397 bp · −
trnV-GAC · NC_063913.1 · 135,624–135,695 bp · −
ycf15 · NC_063913.1 · 141,986–142,234 bp · −
ycf2 · NC_063913.1 · 142,325–149,176 bp · −
psbK · NC_063913.1 · 7,382–7,561 bp · +
psbI · NC_063913.1 · 7,958–8,068 bp · +
trnG-UCC · NC_063913.1 · 8,980–9,734 bp · +
trnR-UCU · NC_063913.1 · 9,917–9,988 bp · +
trnC-GCA · NC_063913.1 · 27,890–27,960 bp · +
petN · NC_063913.1 · 28,123–28,212 bp · +
trnT-GGU · NC_063913.1 · 30,763–30,834 bp · +
psbD · NC_063913.1 · 32,214–33,275 bp · +
psbC · NC_063913.1 · 33,223–34,644 bp · +
psbZ · NC_063913.1 · 35,317–35,505 bp · +
trnG-GCC · NC_063913.1 · 35,777–35,847 bp · +
trnS-GGA · NC_063913.1 · 44,696–44,782 bp · +
trnL-UAA · NC_063913.1 · 46,784–47,324 bp · +
trnF-GAA · NC_063913.1 · 47,623–47,695 bp · +
trnM-CAU · NC_063913.1 · 51,675–51,747 bp · +
rbcL · NC_063913.1 · 54,601–56,055 bp · +
accD · NC_063913.1 · 56,753–58,240 bp · +
psaI · NC_063913.1 · 58,714–58,824 bp · +
ycf4 · NC_063913.1 · 59,278–59,832 bp · +
cemA · NC_063913.1 · 60,380–61,069 bp · +
petA · NC_063913.1 · 61,275–62,237 bp · +
petL · NC_063913.1 · 64,885–64,980 bp · +
petG · NC_063913.1 · 65,159–65,272 bp · +
psaJ · NC_063913.1 · 65,956–66,129 bp · +
rpl33 · NC_063913.1 · 66,581–66,781 bp · +
rps18 · NC_063913.1 · 66,947–67,252 bp · +
rps12 · NC_063913.1 · 137,299–138,082 bp · +
psbB · NC_063913.1 · 71,289–72,815 bp · +
psbT · NC_063913.1 · 72,994–73,101 bp · +
psbH · NC_063913.1 · 73,399–73,620 bp · +
petB · NC_063913.1 · 73,746–75,096 bp · +
petD · NC_063913.1 · 75,290–76,486 bp · +
ycf2 · NC_063913.1 · 84,982–91,833 bp · +
ycf15 · NC_063913.1 · 91,924–92,172 bp · +
trnV-GAC · NC_063913.1 · 98,463–98,534 bp · +
rrn16 · NC_063913.1 · 98,761–100,251 bp · +
trnI-GAU · NC_063913.1 · 100,550–101,561 bp · +
trnA-UGC · NC_063913.1 · 101,626–102,493 bp · +
rrn23 · NC_063913.1 · 102,659–105,467 bp · +
rrn4.5 · NC_063913.1 · 105,568–105,670 bp · +
rrn5 · NC_063913.1 · 105,895–106,015 bp · +
trnR-ACG · NC_063913.1 · 106,259–106,332 bp · +
rpl32 · NC_063913.1 · 110,945–111,115 bp · +
trnL-UAG · NC_063913.1 · 111,819–111,898 bp · +
ccsA · NC_063913.1 · 111,943–112,968 bp · +
trnN-GUU · NC_063913.1 · 127,235–127,306 bp · +
rps7 · NC_063913.1 · 138,136–138,603 bp · +
ndhB · NC_063913.1 · 138,932–141,085 bp · +
trnL-CAA · NC_063913.1 · 141,645–141,725 bp · +
trnI-CAU · NC_063913.1 · 149,265–149,338 bp · +
rpl23 · NC_063913.1 · 149,504–149,785 bp · +
rpl2 · NC_063913.1 · 149,804–151,286 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia subbipinnata
ANNOTATED PLASTOME
NC_063913.1
151,388 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37847 75694 113541 151388 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU ATPA ATPF ATPH ATPI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC ATPE ATPB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1672 4266 2595 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4834 5944 1111 Locate
trnQ-UUG gene − 6918 6989 72 Locate
psbK gene + 7382 7561 180 Locate
psbI gene + 7958 8068 111 Locate
trnS-GCU gene − 8210 8297 88 Locate
trnG-UCC gene + 8980 9734 755 Locate
trnR-UCU gene + 9917 9988 72 Locate
ATPA gene − 10100 11623 1524 Locate
ATPF gene − 11724 12969 1246 Locate
ATPH gene − 13243 13488 246 Locate
ATPI gene − 14459 15202 744 Locate
rps2 gene − 15427 16137 711 Locate
rpoC2 gene − 16346 20533 4188 Locate
rpoC1 gene − 20691 23504 2814 Locate
rpoB gene − 23531 26743 3213 Locate
trnC-GCA gene + 27890 27960 71 Locate
petN gene + 28123 28212 90 Locate
psbM gene − 29189 29293 105 Locate
trnD-GUC gene − 29813 29886 74 Locate
trnY-GUA gene − 29997 30080 84 Locate
trnE-UUC gene − 30152 30224 73 Locate
trnT-GGU gene + 30763 30834 72 Locate
psbD gene + 32214 33275 1062 Locate
psbC gene + 33223 34644 1422 Locate
trnS-UGA gene − 34890 34982 93 Locate
psbZ gene + 35317 35505 189 Locate
trnG-GCC gene + 35777 35847 71 Locate
trnfM-CAU gene − 36027 36100 74 Locate
rps14 gene − 36245 36547 303 Locate
psaB gene − 36670 38874 2205 Locate
psaA gene − 38900 41152 2253 Locate
ycf3 gene − 41936 43879 1944 Locate
trnS-GGA gene + 44696 44782 87 Locate
rps4 gene − 45059 45664 606 Locate
trnT-UGU gene − 46036 46108 73 Locate
trnL-UAA gene + 46784 47324 541 Locate
trnF-GAA gene + 47623 47695 73 Locate
ndhJ gene − 48228 48704 477 Locate
ndhK gene − 48815 49492 678 Locate
ndhC gene − 49544 49906 363 Locate
trnV-UAC gene − 50829 51477 649 Locate
trnM-CAU gene + 51675 51747 73 Locate
ATPE gene − 51943 52344 402 Locate
ATPB gene − 52341 53837 1497 Locate
rbcL gene + 54601 56055 1455 Locate
accD gene + 56753 58240 1488 Locate
psaI gene + 58714 58824 111 Locate
ycf4 gene + 59278 59832 555 Locate
cemA gene + 60380 61069 690 Locate
petA gene + 61275 62237 963 Locate
psbJ gene − 63301 63423 123 Locate
psbL gene − 63553 63669 117 Locate
psbF gene − 63693 63812 120 Locate
psbE gene − 63827 64078 252 Locate
petL gene + 64885 64980 96 Locate
petG gene + 65159 65272 114 Locate
trnW-CCA gene − 65387 65460 74 Locate
trnP-UGG gene − 65631 65704 74 Locate
psaJ gene + 65956 66129 174 Locate
rpl33 gene + 66581 66781 201 Locate
rps18 gene + 66947 67252 306 Locate
rpl20 gene − 67490 67876 387 Locate
rps12 gene − 68692 68805 114 Locate
clpP gene − 68929 70840 1912 Locate
psbB gene + 71289 72815 1527 Locate
psbT gene + 72994 73101 108 Locate
psbN gene − 73162 73293 132 Locate
psbH gene + 73399 73620 222 Locate
petB gene + 73746 75096 1351 Locate
petD gene + 75290 76486 1197 Locate
rpoA gene − 76663 77670 1008 Locate
rps11 gene − 77742 78158 417 Locate
rpl36 gene − 78268 78381 114 Locate
infA gene − 78477 78710 234 Locate
rps8 gene − 78837 79241 405 Locate
rpl14 gene − 79434 79802 369 Locate
rpl16 gene − 79934 81214 1281 Locate
rps3 gene − 81350 82012 663 Locate
rpl22 gene − 81997 82464 468 Locate
rps19 gene − 82534 82812 279 Locate
rpl2 gene − 82872 84354 1483 Locate
rpl23 gene − 84373 84654 282 Locate
trnI-CAU gene − 84820 84893 74 Locate
ycf2 gene + 84982 91833 6852 Locate
ycf15 gene + 91924 92172 249 Locate
trnL-CAA gene − 92433 92513 81 Locate
ndhB gene − 93073 95226 2154 Locate
rps7 gene − 95555 96022 468 Locate
rps12 gene − 96076 96859 784 Locate
trnV-GAC gene + 98463 98534 72 Locate
rrn16 gene + 98761 100251 1491 Locate
trnI-GAU gene + 100550 101561 1012 Locate
trnA-UGC gene + 101626 102493 868 Locate
rrn23 gene + 102659 105467 2809 Locate
rrn4.5 gene + 105568 105670 103 Locate
rrn5 gene + 105895 106015 121 Locate
trnR-ACG gene + 106259 106332 74 Locate
trnN-GUU gene − 106852 106923 72 Locate
ndhF gene − 108277 110511 2235 Locate
rpl32 gene + 110945 111115 171 Locate
trnL-UAG gene + 111819 111898 80 Locate
ccsA gene + 111943 112968 1026 Locate
ndhD gene − 113171 114712 1542 Locate
psaC gene − 114822 115067 246 Locate
ndhE gene − 115318 115620 303 Locate
ndhG gene − 115840 116370 531 Locate
ndhI gene − 116766 117251 486 Locate
ndhA gene − 117332 119408 2077 Locate
ndhH gene − 119410 120645 1236 Locate
rps15 gene − 120691 120963 273 Locate
ycf1 gene − 121389 127016 5628 Locate
trnN-GUU gene + 127235 127306 72 Locate
trnR-ACG gene − 127826 127899 74 Locate
rrn5 gene − 128143 128263 121 Locate
rrn4.5 gene − 128488 128590 103 Locate
rrn23 gene − 128691 131499 2809 Locate
trnA-UGC gene − 131665 132532 868 Locate
trnI-GAU gene − 132597 133608 1012 Locate
rrn16 gene − 133907 135397 1491 Locate
trnV-GAC gene − 135624 135695 72 Locate
rps12 gene + 137299 138082 784 Locate
rps7 gene + 138136 138603 468 Locate
ndhB gene + 138932 141085 2154 Locate
trnL-CAA gene + 141645 141725 81 Locate
ycf15 gene − 141986 142234 249 Locate
ycf2 gene − 142325 149176 6852 Locate
trnI-CAU gene + 149265 149338 74 Locate
rpl23 gene + 149504 149785 282 Locate
rpl2 gene + 149804 151286 1483 Locate
Status Available
Accession NC_063913.1
Length 151,388 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources