Salvia tianschanica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV995245.1 · 8–82 bp · −
psbA · PV995245.1 · 376–1,434 bp · −
trnK-UUU · PV995245.1 · 1,662–4,247 bp · −
matK · PV995245.1 · 1,983–3,512 bp · −
rps16 · PV995245.1 · 4,822–5,925 bp · −
trnQ-UUG · PV995245.1 · 6,866–6,937 bp · −
trnS-GCU · PV995245.1 · 8,153–8,240 bp · −
atpA · PV995245.1 · 10,039–11,562 bp · −
atpF · PV995245.1 · 11,657–12,909 bp · −
atpH · PV995245.1 · 13,166–13,411 bp · −
atpI · PV995245.1 · 14,425–15,168 bp · −
rps2 · PV995245.1 · 15,394–16,104 bp · −
rpoC2 · PV995245.1 · 16,317–20,504 bp · −
rpoC1 · PV995245.1 · 20,671–23,494 bp · −
rpoB · PV995245.1 · 23,521–26,733 bp · −
psbM · PV995245.1 · 29,215–29,319 bp · −
trnD-GUC · PV995245.1 · 29,834–29,907 bp · −
trnY-GUA · PV995245.1 · 30,024–30,107 bp · −
trnE-UUC · PV995245.1 · 30,173–30,245 bp · −
trnS-UGA · PV995245.1 · 34,922–35,014 bp · −
trnfM-CAU · PV995245.1 · 36,058–36,131 bp · −
rps14 · PV995245.1 · 36,282–36,584 bp · −
psaB · PV995245.1 · 36,702–38,906 bp · −
psaA · PV995245.1 · 38,932–41,184 bp · −
ycf3 · PV995245.1 · 41,938–43,866 bp · −
rps4 · PV995245.1 · 45,054–45,659 bp · −
trnT-UGU · PV995245.1 · 46,007–46,079 bp · −
ndhJ · PV995245.1 · 48,234–48,728 bp · −
ndhK · PV995245.1 · 48,821–49,498 bp · −
ndhC · PV995245.1 · 49,550–49,912 bp · −
trnV-UAC · PV995245.1 · 50,873–51,529 bp · −
atpE · PV995245.1 · 51,978–52,379 bp · −
atpB · PV995245.1 · 52,376–53,872 bp · −
psbJ · PV995245.1 · 63,302–63,424 bp · −
psbL · PV995245.1 · 63,559–63,675 bp · −
psbF · PV995245.1 · 63,699–63,818 bp · −
psbE · PV995245.1 · 63,833–64,084 bp · −
trnW-CCA · PV995245.1 · 65,478–65,551 bp · −
trnP-UGG · PV995245.1 · 65,718–65,791 bp · −
rpl20 · PV995245.1 · 67,559–67,945 bp · −
rps12 · PV995245.1 · 68,734–68,847 bp · −
rps12 · PV995245.1 · 96,100–96,893 bp · −
clpP · PV995245.1 · 68,975–70,882 bp · −
psbN · PV995245.1 · 73,199–73,330 bp · −
rpoA · PV995245.1 · 76,715–77,722 bp · −
rps11 · PV995245.1 · 77,798–78,202 bp · −
rpl36 · PV995245.1 · 78,312–78,425 bp · −
infA · PV995245.1 · 78,521–78,754 bp · −
rps8 · PV995245.1 · 78,885–79,289 bp · −
rpl14 · PV995245.1 · 79,460–79,828 bp · −
rpl16 · PV995245.1 · 79,959–81,213 bp · −
rps3 · PV995245.1 · 81,349–82,011 bp · −
rpl22 · PV995245.1 · 81,996–82,463 bp · −
rps19 · PV995245.1 · 82,533–82,811 bp · −
rpl2 · PV995245.1 · 82,871–84,355 bp · −
rpl23 · PV995245.1 · 84,374–84,655 bp · −
trnI-CAU · PV995245.1 · 84,821–84,894 bp · −
trnL-CAA · PV995245.1 · 92,446–92,526 bp · −
ndhB · PV995245.1 · 93,085–95,250 bp · −
rps7 · PV995245.1 · 95,579–96,046 bp · −
trnN-GUU · PV995245.1 · 106,951–107,022 bp · −
ndhF · PV995245.1 · 108,375–110,606 bp · −
ndhD · PV995245.1 · 113,316–114,812 bp · −
psaC · PV995245.1 · 114,939–115,184 bp · −
ndhE · PV995245.1 · 115,439–115,744 bp · −
ndhG · PV995245.1 · 115,957–116,487 bp · −
ndhI · PV995245.1 · 116,858–117,364 bp · −
ndhA · PV995245.1 · 117,445–119,549 bp · −
ndhH · PV995245.1 · 119,551–120,732 bp · −
rps15 · PV995245.1 · 120,836–121,108 bp · −
ycf1 · PV995245.1 · 121,522–127,152 bp · −
trnR-ACG · PV995245.1 · 127,965–128,038 bp · −
rrn5 · PV995245.1 · 128,283–128,403 bp · −
rrn4.5 · PV995245.1 · 128,659–128,761 bp · −
rrn23 · PV995245.1 · 128,860–131,669 bp · −
trnA-UGC · PV995245.1 · 131,822–132,693 bp · −
trnI-GAU · PV995245.1 · 132,758–133,776 bp · −
rrn16 · PV995245.1 · 134,075–135,565 bp · −
trnV-GAC · PV995245.1 · 135,792–135,863 bp · −
ycf15 · PV995245.1 · 142,207–142,470 bp · −
ycf2 · PV995245.1 · 142,546–149,409 bp · −
psbK · PV995245.1 · 7,311–7,505 bp · +
psbI · PV995245.1 · 7,883–7,993 bp · +
trnG-UCC · PV995245.1 · 8,940–9,689 bp · +
trnR-UCU · PV995245.1 · 9,861–9,932 bp · +
trnC-GCA · PV995245.1 · 27,892–27,962 bp · +
petN · PV995245.1 · 28,126–28,215 bp · +
trnT-GGU · PV995245.1 · 30,809–30,880 bp · +
psbD · PV995245.1 · 32,245–33,306 bp · +
psbC · PV995245.1 · 33,254–34,675 bp · +
psbZ · PV995245.1 · 35,268–35,531 bp · +
trnG-GCC · PV995245.1 · 35,802–35,872 bp · +
trnS-GGA · PV995245.1 · 44,686–44,772 bp · +
trnL-UAA · PV995245.1 · 46,760–47,332 bp · +
trnF-GAA · PV995245.1 · 47,631–47,703 bp · +
trnM-CAU · PV995245.1 · 51,710–51,782 bp · +
rbcL · PV995245.1 · 54,645–56,099 bp · +
accD · PV995245.1 · 56,733–58,172 bp · +
psaI · PV995245.1 · 58,636–58,746 bp · +
ycf4 · PV995245.1 · 59,189–59,743 bp · +
cemA · PV995245.1 · 60,396–61,085 bp · +
petA · PV995245.1 · 61,307–62,269 bp · +
petL · PV995245.1 · 64,987–65,082 bp · +
petG · PV995245.1 · 65,261–65,374 bp · +
psaJ · PV995245.1 · 66,062–66,196 bp · +
rpl33 · PV995245.1 · 66,644–66,844 bp · +
rps18 · PV995245.1 · 67,019–67,324 bp · +
rps12 · PV995245.1 · 137,499–138,292 bp · +
psbB · PV995245.1 · 71,321–72,847 bp · +
psbT · PV995245.1 · 73,035–73,142 bp · +
psbH · PV995245.1 · 73,418–73,657 bp · +
petB · PV995245.1 · 73,783–75,168 bp · +
petD · PV995245.1 · 75,356–76,538 bp · +
ycf2 · PV995245.1 · 84,983–91,846 bp · +
ycf15 · PV995245.1 · 91,922–92,185 bp · +
trnV-GAC · PV995245.1 · 98,529–98,600 bp · +
rrn16 · PV995245.1 · 98,827–100,317 bp · +
trnI-GAU · PV995245.1 · 100,616–101,634 bp · +
trnA-UGC · PV995245.1 · 101,699–102,570 bp · +
rrn23 · PV995245.1 · 102,723–105,532 bp · +
rrn4.5 · PV995245.1 · 105,631–105,733 bp · +
rrn5 · PV995245.1 · 105,989–106,109 bp · +
trnR-ACG · PV995245.1 · 106,354–106,427 bp · +
ycf1 · PV995245.1 · 107,240–108,508 bp · +
rpl32 · PV995245.1 · 111,044–111,223 bp · +
trnL-UAG · PV995245.1 · 111,929–112,008 bp · +
ccsA · PV995245.1 · 112,112–113,089 bp · +
trnN-GUU · PV995245.1 · 127,370–127,441 bp · +
rps7 · PV995245.1 · 138,346–138,813 bp · +
ndhB · PV995245.1 · 139,142–141,307 bp · +
trnL-CAA · PV995245.1 · 141,866–141,946 bp · +
trnI-CAU · PV995245.1 · 149,498–149,571 bp · +
rpl23 · PV995245.1 · 149,737–150,018 bp · +
rpl2 · PV995245.1 · 150,037–151,521 bp · +
rps19 · PV995245.1 · 151,581–151,626 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia tianschanica
ANNOTATED PLASTOME
PV995245.1
151,626 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37906 75813 113720 151626 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 8 82 75 Locate
psbA gene − 376 1434 1059 Locate
trnK-UUU gene − 1662 4247 2586 Locate
matK gene − 1983 3512 1530 Locate
rps16 gene − 4822 5925 1104 Locate
trnQ-UUG gene − 6866 6937 72 Locate
psbK gene + 7311 7505 195 Locate
psbI gene + 7883 7993 111 Locate
trnS-GCU gene − 8153 8240 88 Locate
trnG-UCC gene + 8940 9689 750 Locate
trnR-UCU gene + 9861 9932 72 Locate
atpA gene − 10039 11562 1524 Locate
atpF gene − 11657 12909 1253 Locate
atpH gene − 13166 13411 246 Locate
atpI gene − 14425 15168 744 Locate
rps2 gene − 15394 16104 711 Locate
rpoC2 gene − 16317 20504 4188 Locate
rpoC1 gene − 20671 23494 2824 Locate
rpoB gene − 23521 26733 3213 Locate
trnC-GCA gene + 27892 27962 71 Locate
petN gene + 28126 28215 90 Locate
psbM gene − 29215 29319 105 Locate
trnD-GUC gene − 29834 29907 74 Locate
trnY-GUA gene − 30024 30107 84 Locate
trnE-UUC gene − 30173 30245 73 Locate
trnT-GGU gene + 30809 30880 72 Locate
psbD gene + 32245 33306 1062 Locate
psbC gene + 33254 34675 1422 Locate
trnS-UGA gene − 34922 35014 93 Locate
psbZ gene + 35268 35531 264 Locate
trnG-GCC gene + 35802 35872 71 Locate
trnfM-CAU gene − 36058 36131 74 Locate
rps14 gene − 36282 36584 303 Locate
psaB gene − 36702 38906 2205 Locate
psaA gene − 38932 41184 2253 Locate
ycf3 gene − 41938 43866 1929 Locate
trnS-GGA gene + 44686 44772 87 Locate
rps4 gene − 45054 45659 606 Locate
trnT-UGU gene − 46007 46079 73 Locate
trnL-UAA gene + 46760 47332 573 Locate
trnF-GAA gene + 47631 47703 73 Locate
ndhJ gene − 48234 48728 495 Locate
ndhK gene − 48821 49498 678 Locate
ndhC gene − 49550 49912 363 Locate
trnV-UAC gene − 50873 51529 657 Locate
trnM-CAU gene + 51710 51782 73 Locate
atpE gene − 51978 52379 402 Locate
atpB gene − 52376 53872 1497 Locate
rbcL gene + 54645 56099 1455 Locate
accD gene + 56733 58172 1440 Locate
psaI gene + 58636 58746 111 Locate
ycf4 gene + 59189 59743 555 Locate
cemA gene + 60396 61085 690 Locate
petA gene + 61307 62269 963 Locate
psbJ gene − 63302 63424 123 Locate
psbL gene − 63559 63675 117 Locate
psbF gene − 63699 63818 120 Locate
psbE gene − 63833 64084 252 Locate
petL gene + 64987 65082 96 Locate
petG gene + 65261 65374 114 Locate
trnW-CCA gene − 65478 65551 74 Locate
trnP-UGG gene − 65718 65791 74 Locate
psaJ gene + 66062 66196 135 Locate
rpl33 gene + 66644 66844 201 Locate
rps18 gene + 67019 67324 306 Locate
rpl20 gene − 67559 67945 387 Locate
rps12 gene − 68734 68847 114 Locate
clpP gene − 68975 70882 1908 Locate
psbB gene + 71321 72847 1527 Locate
psbT gene + 73035 73142 108 Locate
psbN gene − 73199 73330 132 Locate
psbH gene + 73418 73657 240 Locate
petB gene + 73783 75168 1386 Locate
petD gene + 75356 76538 1183 Locate
rpoA gene − 76715 77722 1008 Locate
rps11 gene − 77798 78202 405 Locate
rpl36 gene − 78312 78425 114 Locate
infA gene − 78521 78754 234 Locate
rps8 gene − 78885 79289 405 Locate
rpl14 gene − 79460 79828 369 Locate
rpl16 gene − 79959 81213 1255 Locate
rps3 gene − 81349 82011 663 Locate
rpl22 gene − 81996 82463 468 Locate
rps19 gene − 82533 82811 279 Locate
rpl2 gene − 82871 84355 1485 Locate
rpl23 gene − 84374 84655 282 Locate
trnI-CAU gene − 84821 84894 74 Locate
ycf2 gene + 84983 91846 6864 Locate
ycf15 gene + 91922 92185 264 Locate
trnL-CAA gene − 92446 92526 81 Locate
ndhB gene − 93085 95250 2166 Locate
rps7 gene − 95579 96046 468 Locate
rps12 gene − 96100 96893 794 Locate
trnV-GAC gene + 98529 98600 72 Locate
rrn16 gene + 98827 100317 1491 Locate
trnI-GAU gene + 100616 101634 1019 Locate
trnA-UGC gene + 101699 102570 872 Locate
rrn23 gene + 102723 105532 2810 Locate
rrn4.5 gene + 105631 105733 103 Locate
rrn5 gene + 105989 106109 121 Locate
trnR-ACG gene + 106354 106427 74 Locate
trnN-GUU gene − 106951 107022 72 Locate
ycf1 gene + 107240 108508 1269 Locate
ndhF gene − 108375 110606 2232 Locate
rpl32 gene + 111044 111223 180 Locate
trnL-UAG gene + 111929 112008 80 Locate
ccsA gene + 112112 113089 978 Locate
ndhD gene − 113316 114812 1497 Locate
psaC gene − 114939 115184 246 Locate
ndhE gene − 115439 115744 306 Locate
ndhG gene − 115957 116487 531 Locate
ndhI gene − 116858 117364 507 Locate
ndhA gene − 117445 119549 2105 Locate
ndhH gene − 119551 120732 1182 Locate
rps15 gene − 120836 121108 273 Locate
ycf1 gene − 121522 127152 5631 Locate
trnN-GUU gene + 127370 127441 72 Locate
trnR-ACG gene − 127965 128038 74 Locate
rrn5 gene − 128283 128403 121 Locate
rrn4.5 gene − 128659 128761 103 Locate
rrn23 gene − 128860 131669 2810 Locate
trnA-UGC gene − 131822 132693 872 Locate
trnI-GAU gene − 132758 133776 1019 Locate
rrn16 gene − 134075 135565 1491 Locate
trnV-GAC gene − 135792 135863 72 Locate
rps12 gene + 137499 138292 794 Locate
rps7 gene + 138346 138813 468 Locate
ndhB gene + 139142 141307 2166 Locate
trnL-CAA gene + 141866 141946 81 Locate
ycf15 gene − 142207 142470 264 Locate
ycf2 gene − 142546 149409 6864 Locate
trnI-CAU gene + 149498 149571 74 Locate
rpl23 gene + 149737 150018 282 Locate
rpl2 gene + 150037 151521 1485 Locate
rps19 gene + 151581 151626 46 Locate
Status Available
Accession PV995245.1
Length 151,626 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources