Salvia tiliifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_050053.1 · 4–75 bp · −
psbA · NC_050053.1 · 394–1,452 bp · −
trnK-UUU · NC_050053.1 · 1,684–4,249 bp · −
matK · NC_050053.1 · 1,988–3,523 bp · −
rps16 · NC_050053.1 · 4,820–5,918 bp · −
trnQ-UUG · NC_050053.1 · 6,677–6,748 bp · −
trnS-GCU · NC_050053.1 · 7,972–8,059 bp · −
atpA · NC_050053.1 · 9,880–11,403 bp · −
atpF · NC_050053.1 · 11,501–12,760 bp · −
atpH · NC_050053.1 · 13,034–13,279 bp · −
atpI · NC_050053.1 · 14,293–15,036 bp · −
rps2 · NC_050053.1 · 15,260–15,970 bp · −
rpoC2 · NC_050053.1 · 16,176–20,363 bp · −
rpoC1 · NC_050053.1 · 20,529–23,343 bp · −
rpoB · NC_050053.1 · 23,370–26,582 bp · −
psbM · NC_050053.1 · 29,044–29,148 bp · −
trnD-GUC · NC_050053.1 · 29,519–29,592 bp · −
trnY-GUA · NC_050053.1 · 29,705–29,788 bp · −
trnE-UUC · NC_050053.1 · 29,859–29,931 bp · −
trnS-UGA · NC_050053.1 · 34,586–34,678 bp · −
trnfM-CAU · NC_050053.1 · 35,698–35,771 bp · −
rps14 · NC_050053.1 · 35,916–36,218 bp · −
psaB · NC_050053.1 · 36,341–38,545 bp · −
psaA · NC_050053.1 · 38,571–40,823 bp · −
ycf3 · NC_050053.1 · 41,554–43,488 bp · −
rps4 · NC_050053.1 · 44,678–45,283 bp · −
trnT-UGU · NC_050053.1 · 45,640–45,712 bp · −
ndhJ · NC_050053.1 · 47,778–48,254 bp · −
ndhK · NC_050053.1 · 48,365–49,042 bp · −
ndhC · NC_050053.1 · 49,094–49,456 bp · −
trnV-UAC · NC_050053.1 · 50,261–50,906 bp · −
atpE · NC_050053.1 · 51,349–51,750 bp · −
atpB · NC_050053.1 · 51,747–53,243 bp · −
psbJ · NC_050053.1 · 62,657–62,779 bp · −
psbL · NC_050053.1 · 62,909–63,130 bp · −
psbF · NC_050053.1 · 63,049–63,168 bp · −
psbE · NC_050053.1 · 63,183–63,434 bp · −
trnW-CCA · NC_050053.1 · 64,741–64,814 bp · −
trnP-UGG · NC_050053.1 · 64,990–65,063 bp · −
rpl20 · NC_050053.1 · 66,828–67,214 bp · −
rps12 · NC_050053.1 · 68,021–68,134 bp · −
rps12 · NC_050053.1 · 95,380–96,173 bp · −
clpP · NC_050053.1 · 68,258–70,163 bp · −
psbN · NC_050053.1 · 72,492–72,623 bp · −
rpoA · NC_050053.1 · 75,992–76,999 bp · −
rps11 · NC_050053.1 · 77,069–77,485 bp · −
rpl36 · NC_050053.1 · 77,597–77,710 bp · −
infA · NC_050053.1 · 77,806–78,039 bp · −
rps8 · NC_050053.1 · 78,161–78,565 bp · −
rpl14 · NC_050053.1 · 78,739–79,107 bp · −
rpl16 · NC_050053.1 · 79,238–80,513 bp · −
rps3 · NC_050053.1 · 80,656–81,318 bp · −
rpl22 · NC_050053.1 · 81,303–81,770 bp · −
rps19 · NC_050053.1 · 81,840–82,118 bp · −
rpl2 · NC_050053.1 · 82,179–83,670 bp · −
rpl23 · NC_050053.1 · 83,689–83,970 bp · −
trnI-CAU · NC_050053.1 · 84,136–84,209 bp · −
trnL-CAA · NC_050053.1 · 91,737–91,817 bp · −
ndhB · NC_050053.1 · 92,377–94,530 bp · −
rps7 · NC_050053.1 · 94,859–95,326 bp · −
trnN-GUU · NC_050053.1 · 106,266–106,337 bp · −
ndhF · NC_050053.1 · 107,685–109,916 bp · −
ndhD · NC_050053.1 · 112,579–114,093 bp · −
psaC · NC_050053.1 · 114,216–114,461 bp · −
ndhE · NC_050053.1 · 114,712–115,014 bp · −
ndhG · NC_050053.1 · 115,230–115,760 bp · −
ndhI · NC_050053.1 · 116,124–116,630 bp · −
ndhA · NC_050053.1 · 116,711–118,812 bp · −
ndhH · NC_050053.1 · 118,814–119,995 bp · −
rps15 · NC_050053.1 · 120,095–120,367 bp · −
ycf1 · NC_050053.1 · 120,774–126,410 bp · −
trnR-ACG · NC_050053.1 · 127,203–127,276 bp · −
rrn5 · NC_050053.1 · 127,520–127,640 bp · −
rrn4.5 · NC_050053.1 · 127,896–127,998 bp · −
rrn23 · NC_050053.1 · 128,099–130,907 bp · −
trnA-UGC · NC_050053.1 · 131,073–131,949 bp · −
trnI-GAU · NC_050053.1 · 132,014–133,032 bp · −
rrn16 · NC_050053.1 · 133,331–134,821 bp · −
trnV-GAC · NC_050053.1 · 135,048–135,119 bp · −
ycf2 · NC_050053.1 · 141,829–148,668 bp · −
psbK · NC_050053.1 · 7,134–7,319 bp · +
psbI · NC_050053.1 · 7,713–7,823 bp · +
trnG-UCC · NC_050053.1 · 8,762–9,522 bp · +
trnR-UCU · NC_050053.1 · 9,698–9,769 bp · +
trnC-GCA · NC_050053.1 · 27,746–27,816 bp · +
petN · NC_050053.1 · 27,972–28,061 bp · +
trnT-GGU · NC_050053.1 · 30,473–30,544 bp · +
psbD · NC_050053.1 · 31,917–32,978 bp · +
psbC · NC_050053.1 · 32,926–34,347 bp · +
psbZ · NC_050053.1 · 35,006–35,194 bp · +
trnG-GCC · NC_050053.1 · 35,472–35,542 bp · +
trnS-GGA · NC_050053.1 · 44,314–44,400 bp · +
trnL-UAA · NC_050053.1 · 46,372–46,946 bp · +
trnF-GAA · NC_050053.1 · 47,234–47,306 bp · +
trnM-CAU · NC_050053.1 · 51,087–51,159 bp · +
rbcL · NC_050053.1 · 54,018–55,472 bp · +
accD · NC_050053.1 · 56,144–57,571 bp · +
psaI · NC_050053.1 · 58,035–58,145 bp · +
ycf4 · NC_050053.1 · 58,590–59,144 bp · +
cemA · NC_050053.1 · 59,790–60,479 bp · +
petA · NC_050053.1 · 60,701–61,663 bp · +
petL · NC_050053.1 · 64,240–64,335 bp · +
petG · NC_050053.1 · 64,513–64,626 bp · +
psaJ · NC_050053.1 · 65,340–65,474 bp · +
rpl33 · NC_050053.1 · 65,912–66,112 bp · +
rps18 · NC_050053.1 · 66,285–66,590 bp · +
rps12 · NC_050053.1 · 136,793–137,586 bp · +
psbB · NC_050053.1 · 70,608–72,134 bp · +
psbT · NC_050053.1 · 72,325–72,426 bp · +
psbH · NC_050053.1 · 72,729–72,950 bp · +
petB · NC_050053.1 · 73,084–74,444 bp · +
petD · NC_050053.1 · 74,632–75,815 bp · +
ycf2 · NC_050053.1 · 84,298–91,137 bp · +
trnV-GAC · NC_050053.1 · 97,847–97,918 bp · +
rrn16 · NC_050053.1 · 98,145–99,635 bp · +
trnI-GAU · NC_050053.1 · 99,934–100,952 bp · +
trnA-UGC · NC_050053.1 · 101,017–101,893 bp · +
rrn23 · NC_050053.1 · 102,059–104,867 bp · +
rrn4.5 · NC_050053.1 · 104,968–105,070 bp · +
rrn5 · NC_050053.1 · 105,326–105,446 bp · +
trnR-ACG · NC_050053.1 · 105,690–105,763 bp · +
ycf1 · NC_050053.1 · 106,556–107,716 bp · +
rpl32 · NC_050053.1 · 110,370–110,540 bp · +
trnL-UAG · NC_050053.1 · 111,188–111,267 bp · +
ccsA · NC_050053.1 · 111,364–112,341 bp · +
trnN-GUU · NC_050053.1 · 126,629–126,700 bp · +
rps7 · NC_050053.1 · 137,640–138,107 bp · +
ndhB · NC_050053.1 · 138,436–140,589 bp · +
trnL-CAA · NC_050053.1 · 141,149–141,229 bp · +
trnI-CAU · NC_050053.1 · 148,757–148,830 bp · +
rpl23 · NC_050053.1 · 148,996–149,277 bp · +
rpl2 · NC_050053.1 · 149,296–150,787 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia tiliifolia
ANNOTATED PLASTOME
NC_050053.1
150,836 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37709 75418 113127 150836 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 75 72 Locate
psbA gene − 394 1452 1059 Locate
trnK-UUU gene − 1684 4249 2566 Locate
matK gene − 1988 3523 1536 Locate
rps16 gene − 4820 5918 1099 Locate
trnQ-UUG gene − 6677 6748 72 Locate
psbK gene + 7134 7319 186 Locate
psbI gene + 7713 7823 111 Locate
trnS-GCU gene − 7972 8059 88 Locate
trnG-UCC gene + 8762 9522 761 Locate
trnR-UCU gene + 9698 9769 72 Locate
atpA gene − 9880 11403 1524 Locate
atpF gene − 11501 12760 1260 Locate
atpH gene − 13034 13279 246 Locate
atpI gene − 14293 15036 744 Locate
rps2 gene − 15260 15970 711 Locate
rpoC2 gene − 16176 20363 4188 Locate
rpoC1 gene − 20529 23343 2815 Locate
rpoB gene − 23370 26582 3213 Locate
trnC-GCA gene + 27746 27816 71 Locate
petN gene + 27972 28061 90 Locate
psbM gene − 29044 29148 105 Locate
trnD-GUC gene − 29519 29592 74 Locate
trnY-GUA gene − 29705 29788 84 Locate
trnE-UUC gene − 29859 29931 73 Locate
trnT-GGU gene + 30473 30544 72 Locate
psbD gene + 31917 32978 1062 Locate
psbC gene + 32926 34347 1422 Locate
trnS-UGA gene − 34586 34678 93 Locate
psbZ gene + 35006 35194 189 Locate
trnG-GCC gene + 35472 35542 71 Locate
trnfM-CAU gene − 35698 35771 74 Locate
rps14 gene − 35916 36218 303 Locate
psaB gene − 36341 38545 2205 Locate
psaA gene − 38571 40823 2253 Locate
ycf3 gene − 41554 43488 1935 Locate
trnS-GGA gene + 44314 44400 87 Locate
rps4 gene − 44678 45283 606 Locate
trnT-UGU gene − 45640 45712 73 Locate
trnL-UAA gene + 46372 46946 575 Locate
trnF-GAA gene + 47234 47306 73 Locate
ndhJ gene − 47778 48254 477 Locate
ndhK gene − 48365 49042 678 Locate
ndhC gene − 49094 49456 363 Locate
trnV-UAC gene − 50261 50906 646 Locate
trnM-CAU gene + 51087 51159 73 Locate
atpE gene − 51349 51750 402 Locate
atpB gene − 51747 53243 1497 Locate
rbcL gene + 54018 55472 1455 Locate
accD gene + 56144 57571 1428 Locate
psaI gene + 58035 58145 111 Locate
ycf4 gene + 58590 59144 555 Locate
cemA gene + 59790 60479 690 Locate
petA gene + 60701 61663 963 Locate
psbJ gene − 62657 62779 123 Locate
psbL gene − 62909 63130 222 Locate
psbF gene − 63049 63168 120 Locate
psbE gene − 63183 63434 252 Locate
petL gene + 64240 64335 96 Locate
petG gene + 64513 64626 114 Locate
trnW-CCA gene − 64741 64814 74 Locate
trnP-UGG gene − 64990 65063 74 Locate
psaJ gene + 65340 65474 135 Locate
rpl33 gene + 65912 66112 201 Locate
rps18 gene + 66285 66590 306 Locate
rpl20 gene − 66828 67214 387 Locate
rps12 gene − 68021 68134 114 Locate
clpP gene − 68258 70163 1906 Locate
psbB gene + 70608 72134 1527 Locate
psbT gene + 72325 72426 102 Locate
psbN gene − 72492 72623 132 Locate
psbH gene + 72729 72950 222 Locate
petB gene + 73084 74444 1361 Locate
petD gene + 74632 75815 1184 Locate
rpoA gene − 75992 76999 1008 Locate
rps11 gene − 77069 77485 417 Locate
rpl36 gene − 77597 77710 114 Locate
infA gene − 77806 78039 234 Locate
rps8 gene − 78161 78565 405 Locate
rpl14 gene − 78739 79107 369 Locate
rpl16 gene − 79238 80513 1276 Locate
rps3 gene − 80656 81318 663 Locate
rpl22 gene − 81303 81770 468 Locate
rps19 gene − 81840 82118 279 Locate
rpl2 gene − 82179 83670 1492 Locate
rpl23 gene − 83689 83970 282 Locate
trnI-CAU gene − 84136 84209 74 Locate
ycf2 gene + 84298 91137 6840 Locate
trnL-CAA gene − 91737 91817 81 Locate
ndhB gene − 92377 94530 2154 Locate
rps7 gene − 94859 95326 468 Locate
rps12 gene − 95380 96173 794 Locate
trnV-GAC gene + 97847 97918 72 Locate
rrn16 gene + 98145 99635 1491 Locate
trnI-GAU gene + 99934 100952 1019 Locate
trnA-UGC gene + 101017 101893 877 Locate
rrn23 gene + 102059 104867 2809 Locate
rrn4.5 gene + 104968 105070 103 Locate
rrn5 gene + 105326 105446 121 Locate
trnR-ACG gene + 105690 105763 74 Locate
trnN-GUU gene − 106266 106337 72 Locate
ycf1 gene + 106556 107716 1161 Locate
ndhF gene − 107685 109916 2232 Locate
rpl32 gene + 110370 110540 171 Locate
trnL-UAG gene + 111188 111267 80 Locate
ccsA gene + 111364 112341 978 Locate
ndhD gene − 112579 114093 1515 Locate
psaC gene − 114216 114461 246 Locate
ndhE gene − 114712 115014 303 Locate
ndhG gene − 115230 115760 531 Locate
ndhI gene − 116124 116630 507 Locate
ndhA gene − 116711 118812 2102 Locate
ndhH gene − 118814 119995 1182 Locate
rps15 gene − 120095 120367 273 Locate
ycf1 gene − 120774 126410 5637 Locate
trnN-GUU gene + 126629 126700 72 Locate
trnR-ACG gene − 127203 127276 74 Locate
rrn5 gene − 127520 127640 121 Locate
rrn4.5 gene − 127896 127998 103 Locate
rrn23 gene − 128099 130907 2809 Locate
trnA-UGC gene − 131073 131949 877 Locate
trnI-GAU gene − 132014 133032 1019 Locate
rrn16 gene − 133331 134821 1491 Locate
trnV-GAC gene − 135048 135119 72 Locate
rps12 gene + 136793 137586 794 Locate
rps7 gene + 137640 138107 468 Locate
ndhB gene + 138436 140589 2154 Locate
trnL-CAA gene + 141149 141229 81 Locate
ycf2 gene − 141829 148668 6840 Locate
trnI-CAU gene + 148757 148830 74 Locate
rpl23 gene + 148996 149277 282 Locate
rpl2 gene + 149296 150787 1492 Locate
Status Available
Accession NC_050053.1
Length 150,836 bp
GC content 38.0%
Annotated genes 131
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources