Salvia tricuspis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
LSC
IR
SSC
IR
trnH-GUG · NC_067738.1 · 12–85 bp · −
psbA · NC_067738.1 · 396–1,454 bp · −
trnK-UUU · NC_067738.1 · 1,686–4,279 bp · −
matK · NC_067738.1 · 1,985–3,547 bp · −
rps16 · NC_067738.1 · 4,852–5,967 bp · −
trnQ-UUG · NC_067738.1 · 6,932–7,003 bp · −
trnS-GCU · NC_067738.1 · 8,218–8,305 bp · −
atpA · NC_067738.1 · 10,103–11,626 bp · −
atpF · NC_067738.1 · 11,733–12,981 bp · −
atpH · NC_067738.1 · 13,249–13,494 bp · −
atpI · NC_067738.1 · 14,495–15,238 bp · −
rps2 · NC_067738.1 · 15,463–16,173 bp · −
rpoC2 · NC_067738.1 · 16,382–20,569 bp · −
rpoC1 · NC_067738.1 · 20,727–23,547 bp · −
rpoB · NC_067738.1 · 23,574–26,786 bp · −
psbM · NC_067738.1 · 29,234–29,338 bp · −
trnD-GUC · NC_067738.1 · 29,857–29,930 bp · −
trnY-GUA · NC_067738.1 · 30,041–30,124 bp · −
trnE-UUC · NC_067738.1 · 30,190–30,262 bp · −
trnS-UGA · NC_067738.1 · 34,927–35,019 bp · −
trnfM-CAU · NC_067738.1 · 36,057–36,130 bp · −
rps14 · NC_067738.1 · 36,275–36,577 bp · −
psaB · NC_067738.1 · 36,700–38,904 bp · −
psaA · NC_067738.1 · 38,930–41,182 bp · −
ycf3 · NC_067738.1 · 41,972–43,909 bp · −
rps4 · NC_067738.1 · 45,091–45,696 bp · −
trnT-UGU · NC_067738.1 · 46,070–46,142 bp · −
ndhJ · NC_067738.1 · 48,253–48,729 bp · −
ndhK · NC_067738.1 · 48,840–49,517 bp · −
ndhC · NC_067738.1 · 49,569–49,931 bp · −
trnV-UAC · NC_067738.1 · 50,873–51,521 bp · −
atpE · NC_067738.1 · 51,979–52,380 bp · −
atpB · NC_067738.1 · 52,377–53,873 bp · −
psbJ · NC_067738.1 · 63,398–63,520 bp · −
psbL · NC_067738.1 · 63,650–63,766 bp · −
psbF · NC_067738.1 · 63,790–63,909 bp · −
psbE · NC_067738.1 · 63,924–64,175 bp · −
trnW-CCA · NC_067738.1 · 65,453–65,526 bp · −
trnP-UGG · NC_067738.1 · 65,705–65,778 bp · −
rpl20 · NC_067738.1 · 67,579–67,965 bp · −
rps12 · NC_067738.1 · 68,776–68,889 bp · −
rps12 · NC_067738.1 · 96,151–96,934 bp · −
clpP · NC_067738.1 · 69,014–70,921 bp · −
psbN · NC_067738.1 · 73,243–73,374 bp · −
rpoA · NC_067738.1 · 76,751–77,758 bp · −
rps11 · NC_067738.1 · 77,830–78,246 bp · −
rpl36 · NC_067738.1 · 78,356–78,469 bp · −
infA · NC_067738.1 · 78,565–78,798 bp · −
rps8 · NC_067738.1 · 78,925–79,329 bp · −
rpl14 · NC_067738.1 · 79,517–79,885 bp · −
rpl16 · NC_067738.1 · 80,017–81,295 bp · −
rps3 · NC_067738.1 · 81,431–82,093 bp · −
rpl22 · NC_067738.1 · 82,078–82,545 bp · −
rps19 · NC_067738.1 · 82,615–82,893 bp · −
rpl2 · NC_067738.1 · 82,953–84,435 bp · −
rpl23 · NC_067738.1 · 84,454–84,735 bp · −
trnI-CAU · NC_067738.1 · 84,901–84,974 bp · −
trnL-CAA · NC_067738.1 · 92,508–92,588 bp · −
ndhB · NC_067738.1 · 93,148–95,301 bp · −
rps7 · NC_067738.1 · 95,630–96,097 bp · −
trnN-GUU · NC_067738.1 · 106,991–107,062 bp · −
ndhF · NC_067738.1 · 108,416–110,650 bp · −
ndhD · NC_067738.1 · 113,331–114,872 bp · −
psaC · NC_067738.1 · 114,971–115,216 bp · −
ndhE · NC_067738.1 · 115,467–115,769 bp · −
ndhG · NC_067738.1 · 115,987–116,517 bp · −
ndhI · NC_067738.1 · 116,906–117,412 bp · −
ndhA · NC_067738.1 · 117,493–119,587 bp · −
ndhH · NC_067738.1 · 119,589–120,824 bp · −
rps15 · NC_067738.1 · 120,870–121,142 bp · −
ycf1 · NC_067738.1 · 121,559–127,204 bp · −
trnR-ACG · NC_067738.1 · 128,014–128,087 bp · −
rrn5 · NC_067738.1 · 128,331–128,451 bp · −
rrn4.5 · NC_067738.1 · 128,707–128,809 bp · −
rrn23 · NC_067738.1 · 128,910–131,718 bp · −
trnA-UGC · NC_067738.1 · 131,884–132,760 bp · −
trnI-GAU · NC_067738.1 · 132,825–133,837 bp · −
rrn16 · NC_067738.1 · 134,136–135,626 bp · −
trnV-GAC · NC_067738.1 · 135,853–135,924 bp · −
ycf15 · NC_067738.1 · 142,238–142,486 bp · −
ycf2 · NC_067738.1 · 142,577–149,422 bp · −
psbK · NC_067738.1 · 7,383–7,562 bp · +
psbI · NC_067738.1 · 7,956–8,066 bp · +
trnG-UCC · NC_067738.1 · 8,991–9,743 bp · +
trnR-UCU · NC_067738.1 · 9,926–9,997 bp · +
trnC-GCA · NC_067738.1 · 27,942–28,012 bp · +
petN · NC_067738.1 · 28,168–28,257 bp · +
trnT-GGU · NC_067738.1 · 30,802–30,873 bp · +
psbD · NC_067738.1 · 32,251–33,312 bp · +
psbC · NC_067738.1 · 33,260–34,681 bp · +
psbZ · NC_067738.1 · 35,354–35,542 bp · +
trnG-GCC · NC_067738.1 · 35,814–35,884 bp · +
trnS-GGA · NC_067738.1 · 44,728–44,814 bp · +
trnL-UAA · NC_067738.1 · 46,808–47,348 bp · +
trnF-GAA · NC_067738.1 · 47,647–47,719 bp · +
trnM-CAU · NC_067738.1 · 51,702–51,774 bp · +
rbcL · NC_067738.1 · 54,637–56,091 bp · +
accD · NC_067738.1 · 56,789–58,276 bp · +
psaI · NC_067738.1 · 58,751–58,861 bp · +
ycf4 · NC_067738.1 · 59,308–59,862 bp · +
cemA · NC_067738.1 · 60,473–61,162 bp · +
petA · NC_067738.1 · 61,383–62,345 bp · +
petL · NC_067738.1 · 64,950–65,045 bp · +
petG · NC_067738.1 · 65,225–65,338 bp · +
psaJ · NC_067738.1 · 66,030–66,203 bp · +
rpl33 · NC_067738.1 · 66,654–66,854 bp · +
rps18 · NC_067738.1 · 67,020–67,325 bp · +
rps12 · NC_067738.1 · 137,551–138,334 bp · +
psbB · NC_067738.1 · 71,370–72,896 bp · +
psbT · NC_067738.1 · 73,075–73,182 bp · +
psbH · NC_067738.1 · 73,480–73,701 bp · +
petB · NC_067738.1 · 73,835–75,184 bp · +
petD · NC_067738.1 · 75,378–76,574 bp · +
ycf2 · NC_067738.1 · 85,063–91,908 bp · +
ycf15 · NC_067738.1 · 91,999–92,247 bp · +
trnV-GAC · NC_067738.1 · 98,561–98,632 bp · +
rrn16 · NC_067738.1 · 98,859–100,349 bp · +
trnI-GAU · NC_067738.1 · 100,648–101,660 bp · +
trnA-UGC · NC_067738.1 · 101,725–102,601 bp · +
rrn23 · NC_067738.1 · 102,767–105,575 bp · +
rrn4.5 · NC_067738.1 · 105,676–105,778 bp · +
rrn5 · NC_067738.1 · 106,034–106,154 bp · +
trnR-ACG · NC_067738.1 · 106,398–106,471 bp · +
ycf1 · NC_067738.1 · 107,281–108,447 bp · +
rpl32 · NC_067738.1 · 111,081–111,251 bp · +
trnL-UAG · NC_067738.1 · 111,953–112,032 bp · +
ccsA · NC_067738.1 · 112,077–113,102 bp · +
trnN-GUU · NC_067738.1 · 127,423–127,494 bp · +
rps7 · NC_067738.1 · 138,388–138,855 bp · +
ndhB · NC_067738.1 · 139,184–141,337 bp · +
trnL-CAA · NC_067738.1 · 141,897–141,977 bp · +
trnI-CAU · NC_067738.1 · 149,511–149,584 bp · +
rpl23 · NC_067738.1 · 149,750–150,031 bp · +
rpl2 · NC_067738.1 · 150,050–151,532 bp · +
rps19 · NC_067738.1 · 151,592–151,633 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia tricuspis
ANNOTATED PLASTOME
NC_067738.1
151,633 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37908 75816 113725 151633 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 12 85 74 Locate
psbA gene − 396 1454 1059 Locate
trnK-UUU gene − 1686 4279 2594 Locate
matK gene − 1985 3547 1563 Locate
rps16 gene − 4852 5967 1116 Locate
trnQ-UUG gene − 6932 7003 72 Locate
psbK gene + 7383 7562 180 Locate
psbI gene + 7956 8066 111 Locate
trnS-GCU gene − 8218 8305 88 Locate
trnG-UCC gene + 8991 9743 753 Locate
trnR-UCU gene + 9926 9997 72 Locate
atpA gene − 10103 11626 1524 Locate
atpF gene − 11733 12981 1249 Locate
atpH gene − 13249 13494 246 Locate
atpI gene − 14495 15238 744 Locate
rps2 gene − 15463 16173 711 Locate
rpoC2 gene − 16382 20569 4188 Locate
rpoC1 gene − 20727 23547 2821 Locate
rpoB gene − 23574 26786 3213 Locate
trnC-GCA gene + 27942 28012 71 Locate
petN gene + 28168 28257 90 Locate
psbM gene − 29234 29338 105 Locate
trnD-GUC gene − 29857 29930 74 Locate
trnY-GUA gene − 30041 30124 84 Locate
trnE-UUC gene − 30190 30262 73 Locate
trnT-GGU gene + 30802 30873 72 Locate
psbD gene + 32251 33312 1062 Locate
psbC gene + 33260 34681 1422 Locate
trnS-UGA gene − 34927 35019 93 Locate
psbZ gene + 35354 35542 189 Locate
trnG-GCC gene + 35814 35884 71 Locate
trnfM-CAU gene − 36057 36130 74 Locate
rps14 gene − 36275 36577 303 Locate
psaB gene − 36700 38904 2205 Locate
psaA gene − 38930 41182 2253 Locate
ycf3 gene − 41972 43909 1938 Locate
trnS-GGA gene + 44728 44814 87 Locate
rps4 gene − 45091 45696 606 Locate
trnT-UGU gene − 46070 46142 73 Locate
trnL-UAA gene + 46808 47348 541 Locate
trnF-GAA gene + 47647 47719 73 Locate
ndhJ gene − 48253 48729 477 Locate
ndhK gene − 48840 49517 678 Locate
ndhC gene − 49569 49931 363 Locate
trnV-UAC gene − 50873 51521 649 Locate
trnM-CAU gene + 51702 51774 73 Locate
atpE gene − 51979 52380 402 Locate
atpB gene − 52377 53873 1497 Locate
rbcL gene + 54637 56091 1455 Locate
accD gene + 56789 58276 1488 Locate
psaI gene + 58751 58861 111 Locate
ycf4 gene + 59308 59862 555 Locate
cemA gene + 60473 61162 690 Locate
petA gene + 61383 62345 963 Locate
psbJ gene − 63398 63520 123 Locate
psbL gene − 63650 63766 117 Locate
psbF gene − 63790 63909 120 Locate
psbE gene − 63924 64175 252 Locate
petL gene + 64950 65045 96 Locate
petG gene + 65225 65338 114 Locate
trnW-CCA gene − 65453 65526 74 Locate
trnP-UGG gene − 65705 65778 74 Locate
psaJ gene + 66030 66203 174 Locate
rpl33 gene + 66654 66854 201 Locate
rps18 gene + 67020 67325 306 Locate
rpl20 gene − 67579 67965 387 Locate
rps12 gene − 68776 68889 114 Locate
clpP gene − 69014 70921 1908 Locate
psbB gene + 71370 72896 1527 Locate
psbT gene + 73075 73182 108 Locate
psbN gene − 73243 73374 132 Locate
psbH gene + 73480 73701 222 Locate
petB gene + 73835 75184 1350 Locate
petD gene + 75378 76574 1197 Locate
rpoA gene − 76751 77758 1008 Locate
rps11 gene − 77830 78246 417 Locate
rpl36 gene − 78356 78469 114 Locate
infA gene − 78565 78798 234 Locate
rps8 gene − 78925 79329 405 Locate
rpl14 gene − 79517 79885 369 Locate
rpl16 gene − 80017 81295 1279 Locate
rps3 gene − 81431 82093 663 Locate
rpl22 gene − 82078 82545 468 Locate
rps19 gene − 82615 82893 279 Locate
rpl2 gene − 82953 84435 1483 Locate
rpl23 gene − 84454 84735 282 Locate
trnI-CAU gene − 84901 84974 74 Locate
ycf2 gene + 85063 91908 6846 Locate
ycf15 gene + 91999 92247 249 Locate
trnL-CAA gene − 92508 92588 81 Locate
ndhB gene − 93148 95301 2154 Locate
rps7 gene − 95630 96097 468 Locate
rps12 gene − 96151 96934 784 Locate
trnV-GAC gene + 98561 98632 72 Locate
rrn16 gene + 98859 100349 1491 Locate
trnI-GAU gene + 100648 101660 1013 Locate
trnA-UGC gene + 101725 102601 877 Locate
rrn23 gene + 102767 105575 2809 Locate
rrn4.5 gene + 105676 105778 103 Locate
rrn5 gene + 106034 106154 121 Locate
trnR-ACG gene + 106398 106471 74 Locate
trnN-GUU gene − 106991 107062 72 Locate
ycf1 gene + 107281 108447 1167 Locate
ndhF gene − 108416 110650 2235 Locate
rpl32 gene + 111081 111251 171 Locate
trnL-UAG gene + 111953 112032 80 Locate
ccsA gene + 112077 113102 1026 Locate
ndhD gene − 113331 114872 1542 Locate
psaC gene − 114971 115216 246 Locate
ndhE gene − 115467 115769 303 Locate
ndhG gene − 115987 116517 531 Locate
ndhI gene − 116906 117412 507 Locate
ndhA gene − 117493 119587 2095 Locate
ndhH gene − 119589 120824 1236 Locate
rps15 gene − 120870 121142 273 Locate
ycf1 gene − 121559 127204 5646 Locate
trnN-GUU gene + 127423 127494 72 Locate
trnR-ACG gene − 128014 128087 74 Locate
rrn5 gene − 128331 128451 121 Locate
rrn4.5 gene − 128707 128809 103 Locate
rrn23 gene − 128910 131718 2809 Locate
trnA-UGC gene − 131884 132760 877 Locate
trnI-GAU gene − 132825 133837 1013 Locate
rrn16 gene − 134136 135626 1491 Locate
trnV-GAC gene − 135853 135924 72 Locate
rps12 gene + 137551 138334 784 Locate
rps7 gene + 138388 138855 468 Locate
ndhB gene + 139184 141337 2154 Locate
trnL-CAA gene + 141897 141977 81 Locate
ycf15 gene − 142238 142486 249 Locate
ycf2 gene − 142577 149422 6846 Locate
trnI-CAU gene + 149511 149584 74 Locate
rpl23 gene + 149750 150031 282 Locate
rpl2 gene + 150050 151532 1483 Locate
rps19 gene + 151592 151633 42 Locate
Status Available
Accession NC_067738.1
Length 151,633 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources