Coordinate-aware organelle record

Salvia trijuga chloroplast genome

Available NC_061229.1 151,392 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	85	74
psbA	gene	photosystem-ii	−	394	1453	1059
trnK-UUU	gene	translation-rna	−	1684	4278	2594
matK	gene	other	−	1983	3546	1563
rps16	gene	ribosomal-protein	−	4842	5961	1119
trnQ-UUG	gene	translation-rna	−	6950	7022	72
psbK	gene	photosystem-ii	+	7408	7588	180
psbI	gene	photosystem-ii	+	7980	8091	111
trnS-GCU	gene	translation-rna	−	8239	8327	88
trnG-UCC	gene	translation-rna	+	9009	9764	755
trnR-UCU	gene	translation-rna	+	9945	10017	72
atpA	gene	atp-synthase	−	10122	11646	1524
atpF	gene	atp-synthase	−	11749	12995	1246
atpH	gene	atp-synthase	−	13260	13506	246
atpI	gene	atp-synthase	−	14509	15253	744
rps2	gene	ribosomal-protein	−	15479	16190	711
rpoC2	gene	rna-polymerase	−	16399	20578	4179
rpoC1	gene	rna-polymerase	−	20735	23556	2821
rpoB	gene	rna-polymerase	−	23582	26795	3213
trnC-GCA	gene	translation-rna	+	27964	28035	71
petN	gene	cytochrome	+	28190	28280	90
psbM	gene	photosystem-ii	−	29255	29360	105
trnD-GUC	gene	translation-rna	−	29878	29952	74
trnY-GUA	gene	translation-rna	−	30062	30146	84
trnE-UUC	gene	translation-rna	−	30217	30290	73
trnT-GGU	gene	translation-rna	+	30828	30900	72
psbD	gene	photosystem-ii	+	32152	33214	1062
psbC	gene	photosystem-ii	+	33161	34583	1422
trnS-UGA	gene	translation-rna	−	34828	34921	93
psbZ	gene	photosystem-ii	+	35255	35444	189
trnG-GCC	gene	translation-rna	+	35732	35803	71
trnfM-CAU	gene	translation-rna	−	35980	36054	74
rps14	gene	ribosomal-protein	−	36198	36501	303
psaB	gene	photosystem-i	−	36623	38828	2205
psaA	gene	photosystem-i	−	38853	41106	2253
ycf3	gene	other	−	41865	43791	1926
trnS-GGA	gene	translation-rna	+	44622	44709	87
rps4	gene	ribosomal-protein	−	44985	45591	606
trnT-UGU	gene	translation-rna	−	45986	46059	73
trnL-UAA	gene	translation-rna	+	46697	47239	542
trnF-GAA	gene	translation-rna	+	47537	47610	73
ndhJ	gene	nad-dehydrogenase	−	48137	48614	477
ndhK	gene	nad-dehydrogenase	−	48724	49402	678
ndhC	gene	nad-dehydrogenase	−	49453	49816	363
trnV-UAC	gene	translation-rna	−	50759	51408	649
trnM-CAU	gene	translation-rna	+	51588	51661	73
atpE	gene	atp-synthase	−	51871	52273	402
atpB	gene	atp-synthase	−	52269	53766	1497
rbcL	gene	other	+	54550	55984	1434
accD	gene	other	+	56691	58197	1506
psaI	gene	photosystem-i	+	58543	58654	111
ycf4	gene	other	+	59099	59654	555
cemA	gene	other	+	60265	60955	690
petA	gene	cytochrome	+	61175	62138	963
psbJ	gene	photosystem-ii	−	63199	63322	123
psbL	gene	photosystem-ii	−	63451	63568	117
psbF	gene	photosystem-ii	−	63591	63711	120
psbE	gene	photosystem-ii	−	63725	63977	252
petL	gene	cytochrome	+	64757	64853	96
petG	gene	cytochrome	+	65031	65145	114
trnW-CCA	gene	translation-rna	−	65259	65333	74
trnP-UGG	gene	translation-rna	−	65511	65585	74
psaJ	gene	photosystem-i	+	65878	66013	135
rpl33	gene	ribosomal-protein	+	66468	66669	201
rps18	gene	ribosomal-protein	+	66834	67140	306
rpl20	gene	ribosomal-protein	−	67371	67758	387
rps12	gene	ribosomal-protein	−	68567	96697	28130
rps12	gene	ribosomal-protein	+	68567	138096	69529
clpP	gene	other	−	68804	70704	1900
psbB	gene	photosystem-ii	+	71145	72672	1527
psbT	gene	photosystem-ii	+	72844	72952	108
psbN	gene	photosystem-ii	−	73012	73144	132
psbH	gene	photosystem-ii	+	73249	73471	222
petB	gene	cytochrome	+	73596	74947	1351
petD	gene	cytochrome	+	75140	76337	1197
rpoA	gene	rna-polymerase	−	76513	77521	1008
rps11	gene	ribosomal-protein	−	77591	78008	417
rpl36	gene	ribosomal-protein	−	78117	78231	114
infA	gene	other	−	78326	78560	234
rps8	gene	ribosomal-protein	−	78687	79092	405
rpl14	gene	ribosomal-protein	−	79281	79650	369
rpl16	gene	ribosomal-protein	−	79781	81056	1275
rps3	gene	ribosomal-protein	−	81191	81854	663
rpl22	gene	ribosomal-protein	−	81838	82306	468
rps19	gene	ribosomal-protein	−	82380	82659	279
rpl2	gene	ribosomal-protein	−	82718	84201	1483
rpl23	gene	ribosomal-protein	−	84219	84501	282
trnI-CAU	gene	translation-rna	−	84666	84740	74
ycf2	gene	other	+	84828	91671	6843
ycf15	gene	other	+	91761	92010	249
trnL-CAA	gene	translation-rna	−	92270	92351	81
ndhB	gene	nad-dehydrogenase	−	92910	95064	2154
rps7	gene	ribosomal-protein	−	95392	95860	468
trnV-GAC	gene	translation-rna	+	98312	98384	72
rrn16	gene	ribosomal-rna	+	98610	100101	1491
trnI-GAU	gene	translation-rna	+	100399	101412	1013
trnA-UGC	gene	translation-rna	+	101476	102353	877
rrn23	gene	ribosomal-rna	+	102528	105339	2811
rrn4.5	gene	ribosomal-rna	+	105437	105540	103
rrn5	gene	ribosomal-rna	+	105795	105916	121
trnR-ACG	gene	translation-rna	+	106159	106233	74
trnN-GUU	gene	translation-rna	−	106752	106824	72
ndhF	gene	nad-dehydrogenase	−	108177	110394	2217
rpl32	gene	ribosomal-protein	+	110840	111020	180
trnL-UAG	gene	translation-rna	+	111718	111798	80
ccsA	gene	other	+	111890	112868	978
ndhD	gene	nad-dehydrogenase	−	113102	114644	1542
psaC	gene	photosystem-i	−	114737	114983	246
ndhE	gene	nad-dehydrogenase	−	115233	115539	306
ndhG	gene	nad-dehydrogenase	−	115755	116286	531
ndhI	gene	nad-dehydrogenase	−	116670	117177	507
ndhA	gene	nad-dehydrogenase	−	117257	119358	2101
ndhH	gene	nad-dehydrogenase	−	119359	120541	1182
rps15	gene	ribosomal-protein	−	120640	120913	273
ycf1	gene	other	−	121321	126967	5646
trnN-GUU	gene	translation-rna	+	127185	127257	72
trnR-ACG	gene	translation-rna	−	127776	127850	74
rrn5	gene	ribosomal-rna	−	128093	128214	121
rrn4.5	gene	ribosomal-rna	−	128469	128572	103
rrn23	gene	ribosomal-rna	−	128670	131481	2811
trnA-UGC	gene	translation-rna	−	131656	132533	877
trnI-GAU	gene	translation-rna	−	132597	133610	1013
rrn16	gene	ribosomal-rna	−	133908	135399	1491
trnV-GAC	gene	translation-rna	−	135625	135697	72
rps7	gene	ribosomal-protein	+	138149	138617	468
ndhB	gene	nad-dehydrogenase	+	138945	141099	2154
trnL-CAA	gene	translation-rna	+	141658	141739	81
ycf15	gene	other	−	141999	142248	249
ycf2	gene	other	−	142338	149181	6843
trnI-CAU	gene	translation-rna	+	149269	149343	74
rpl23	gene	ribosomal-protein	+	149508	149790	282
rpl2	gene	ribosomal-protein	+	149808	151291	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_061229.1DNA · accDNC_061229DNA · atpBNC_061229DNA · matKNC_061229DNA · ndhFNC_061229DNA · psbANC_061229DNA · rbcLNC_061229DNA · rps12NC_061229DNA · ycf1NC_061229