Salvia tubifera chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · MT156369.1 · 2–75 bp · −
psbA · MT156369.1 · 392–1,450 bp · −
trnK-UUU · MT156369.1 · 1,682–4,247 bp · −
matK · MT156369.1 · 1,986–3,509 bp · −
rps16 · MT156369.1 · 4,819–5,917 bp · −
trnQ-UUG · MT156369.1 · 6,672–6,743 bp · −
trnS-GCU · MT156369.1 · 7,965–8,052 bp · −
atpA · MT156369.1 · 9,872–11,395 bp · −
atpF · MT156369.1 · 11,492–12,754 bp · −
atpH · MT156369.1 · 13,028–13,273 bp · −
atpI · MT156369.1 · 14,270–15,013 bp · −
rps2 · MT156369.1 · 15,237–15,947 bp · −
rpoC2 · MT156369.1 · 16,152–20,339 bp · −
rpoC1 · MT156369.1 · 20,506–23,338 bp · −
rpoB · MT156369.1 · 23,344–26,556 bp · −
psbM · MT156369.1 · 29,018–29,122 bp · −
trnD-GUC · MT156369.1 · 29,493–29,566 bp · −
trnY-GUA · MT156369.1 · 29,679–29,762 bp · −
trnE-UUC · MT156369.1 · 29,833–29,905 bp · −
trnS-UGA · MT156369.1 · 34,529–34,621 bp · −
trnfM-CAU · MT156369.1 · 35,642–35,715 bp · −
rps14 · MT156369.1 · 35,860–36,162 bp · −
psaB · MT156369.1 · 36,285–38,489 bp · −
psaA · MT156369.1 · 38,515–40,767 bp · −
ycf3 · MT156369.1 · 41,498–43,431 bp · −
rps4 · MT156369.1 · 44,621–45,226 bp · −
trnT-UGU · MT156369.1 · 45,587–45,659 bp · −
ndhJ · MT156369.1 · 47,730–48,206 bp · −
ndhK · MT156369.1 · 48,317–48,994 bp · −
ndhC · MT156369.1 · 49,046–49,408 bp · −
trnV-UAC · MT156369.1 · 50,213–50,858 bp · −
atpE · MT156369.1 · 51,301–51,702 bp · −
atpB · MT156369.1 · 51,699–53,195 bp · −
psbJ · MT156369.1 · 62,658–62,780 bp · −
psbL · MT156369.1 · 62,910–63,026 bp · −
psbF · MT156369.1 · 63,050–63,169 bp · −
psbE · MT156369.1 · 63,184–63,435 bp · −
trnW-CCA · MT156369.1 · 64,821–64,894 bp · −
trnP-UGG · MT156369.1 · 65,068–65,141 bp · −
rpl20 · MT156369.1 · 66,904–67,290 bp · −
rps12 · MT156369.1 · 68,099–68,212 bp · −
rps12 · MT156369.1 · 95,465–96,258 bp · −
clpP · MT156369.1 · 68,336–70,243 bp · −
psbN · MT156369.1 · 72,572–72,703 bp · −
rpoA · MT156369.1 · 76,073–77,080 bp · −
rps11 · MT156369.1 · 77,150–77,566 bp · −
rpl36 · MT156369.1 · 77,678–77,791 bp · −
infA · MT156369.1 · 77,887–78,120 bp · −
rps8 · MT156369.1 · 78,243–78,647 bp · −
rpl14 · MT156369.1 · 78,823–79,191 bp · −
rpl16 · MT156369.1 · 79,322–80,597 bp · −
rps3 · MT156369.1 · 80,740–81,402 bp · −
rpl22 · MT156369.1 · 81,387–81,854 bp · −
rps19 · MT156369.1 · 81,924–82,202 bp · −
rpl2 · MT156369.1 · 82,264–83,755 bp · −
rpl23 · MT156369.1 · 83,774–84,055 bp · −
trnI-CAU · MT156369.1 · 84,221–84,294 bp · −
trnL-CAA · MT156369.1 · 91,822–91,902 bp · −
ndhB · MT156369.1 · 92,462–94,615 bp · −
rps7 · MT156369.1 · 94,944–95,411 bp · −
trnN-GUU · MT156369.1 · 106,351–106,422 bp · −
ndhF · MT156369.1 · 107,753–110,005 bp · −
ndhD · MT156369.1 · 112,671–114,212 bp · −
psaC · MT156369.1 · 114,308–114,553 bp · −
ndhE · MT156369.1 · 114,805–115,110 bp · −
ndhG · MT156369.1 · 115,323–115,853 bp · −
ndhI · MT156369.1 · 116,218–116,724 bp · −
ndhA · MT156369.1 · 116,805–118,905 bp · −
ndhH · MT156369.1 · 118,907–120,088 bp · −
rps15 · MT156369.1 · 120,188–120,460 bp · −
ycf1 · MT156369.1 · 120,867–126,404 bp · −
trnR-ACG · MT156369.1 · 127,308–127,381 bp · −
rrn5 · MT156369.1 · 127,625–127,745 bp · −
rrn4.5 · MT156369.1 · 128,001–128,103 bp · −
rrn23 · MT156369.1 · 128,202–131,012 bp · −
trnA-UGC · MT156369.1 · 131,178–132,054 bp · −
trnI-GAU · MT156369.1 · 132,119–133,137 bp · −
rrn16 · MT156369.1 · 133,436–134,926 bp · −
trnV-GAC · MT156369.1 · 135,153–135,224 bp · −
ycf15 · MT156369.1 · 141,595–141,843 bp · −
ycf2 · MT156369.1 · 141,934–148,773 bp · −
psbK · MT156369.1 · 7,129–7,314 bp · +
psbI · MT156369.1 · 7,707–7,817 bp · +
trnG-UCC · MT156369.1 · 8,758–9,518 bp · +
trnR-UCU · MT156369.1 · 9,694–9,765 bp · +
trnC-GCA · MT156369.1 · 27,719–27,789 bp · +
petN · MT156369.1 · 27,945–28,034 bp · +
trnT-GGU · MT156369.1 · 30,447–30,518 bp · +
psbD · MT156369.1 · 31,860–32,921 bp · +
psbC · MT156369.1 · 32,869–34,290 bp · +
psbZ · MT156369.1 · 34,949–35,137 bp · +
trnG-GCC · MT156369.1 · 35,415–35,485 bp · +
trnS-GGA · MT156369.1 · 44,257–44,343 bp · +
trnL-UAA · MT156369.1 · 46,319–46,893 bp · +
trnF-GAA · MT156369.1 · 47,181–47,253 bp · +
trnM-CAU · MT156369.1 · 51,039–51,111 bp · +
rbcL · MT156369.1 · 53,993–55,426 bp · +
accD · MT156369.1 · 56,098–57,567 bp · +
psaI · MT156369.1 · 58,031–58,141 bp · +
ycf4 · MT156369.1 · 58,585–59,139 bp · +
cemA · MT156369.1 · 59,780–60,469 bp · +
petA · MT156369.1 · 60,691–61,653 bp · +
petL · MT156369.1 · 64,320–64,415 bp · +
petG · MT156369.1 · 64,593–64,706 bp · +
psaJ · MT156369.1 · 65,420–65,554 bp · +
rpl33 · MT156369.1 · 65,993–66,193 bp · +
rps18 · MT156369.1 · 66,366–66,671 bp · +
rps12 · MT156369.1 · 136,898–137,691 bp · +
psbB · MT156369.1 · 70,688–72,214 bp · +
psbT · MT156369.1 · 72,405–72,506 bp · +
psbH · MT156369.1 · 72,809–73,030 bp · +
petB · MT156369.1 · 73,164–74,525 bp · +
petD · MT156369.1 · 74,713–75,896 bp · +
ycf2 · MT156369.1 · 84,383–91,222 bp · +
ycf15 · MT156369.1 · 91,313–91,561 bp · +
trnV-GAC · MT156369.1 · 97,932–98,003 bp · +
rrn16 · MT156369.1 · 98,230–99,720 bp · +
trnI-GAU · MT156369.1 · 100,019–101,037 bp · +
trnA-UGC · MT156369.1 · 101,102–101,978 bp · +
rrn23 · MT156369.1 · 102,144–104,954 bp · +
rrn4.5 · MT156369.1 · 105,053–105,155 bp · +
rrn5 · MT156369.1 · 105,411–105,531 bp · +
trnR-ACG · MT156369.1 · 105,775–105,848 bp · +
ycf1 · MT156369.1 · 106,752–107,801 bp · +
rpl32 · MT156369.1 · 110,461–110,631 bp · +
trnL-UAG · MT156369.1 · 111,280–111,359 bp · +
ccsA · MT156369.1 · 111,456–112,433 bp · +
trnN-GUU · MT156369.1 · 126,734–126,805 bp · +
rps7 · MT156369.1 · 137,745–138,212 bp · +
ndhB · MT156369.1 · 138,541–140,694 bp · +
trnL-CAA · MT156369.1 · 141,254–141,334 bp · +
trnI-CAU · MT156369.1 · 148,862–148,935 bp · +
rpl23 · MT156369.1 · 149,101–149,382 bp · +
rpl2 · MT156369.1 · 149,401–150,892 bp · +
rps19 · MT156369.1 · 150,954–150,977 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia tubifera
ANNOTATED PLASTOME
MT156369.1
150,977 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37744 75488 113233 150977 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1682 4247 2566 Locate
matK gene − 1986 3509 1524 Locate
rps16 gene − 4819 5917 1099 Locate
trnQ-UUG gene − 6672 6743 72 Locate
psbK gene + 7129 7314 186 Locate
psbI gene + 7707 7817 111 Locate
trnS-GCU gene − 7965 8052 88 Locate
trnG-UCC gene + 8758 9518 761 Locate
trnR-UCU gene + 9694 9765 72 Locate
atpA gene − 9872 11395 1524 Locate
atpF gene − 11492 12754 1263 Locate
atpH gene − 13028 13273 246 Locate
atpI gene − 14270 15013 744 Locate
rps2 gene − 15237 15947 711 Locate
rpoC2 gene − 16152 20339 4188 Locate
rpoC1 gene − 20506 23338 2833 Locate
rpoB gene − 23344 26556 3213 Locate
trnC-GCA gene + 27719 27789 71 Locate
petN gene + 27945 28034 90 Locate
psbM gene − 29018 29122 105 Locate
trnD-GUC gene − 29493 29566 74 Locate
trnY-GUA gene − 29679 29762 84 Locate
trnE-UUC gene − 29833 29905 73 Locate
trnT-GGU gene + 30447 30518 72 Locate
psbD gene + 31860 32921 1062 Locate
psbC gene + 32869 34290 1422 Locate
trnS-UGA gene − 34529 34621 93 Locate
psbZ gene + 34949 35137 189 Locate
trnG-GCC gene + 35415 35485 71 Locate
trnfM-CAU gene − 35642 35715 74 Locate
rps14 gene − 35860 36162 303 Locate
psaB gene − 36285 38489 2205 Locate
psaA gene − 38515 40767 2253 Locate
ycf3 gene − 41498 43431 1934 Locate
trnS-GGA gene + 44257 44343 87 Locate
rps4 gene − 44621 45226 606 Locate
trnT-UGU gene − 45587 45659 73 Locate
trnL-UAA gene + 46319 46893 575 Locate
trnF-GAA gene + 47181 47253 73 Locate
ndhJ gene − 47730 48206 477 Locate
ndhK gene − 48317 48994 678 Locate
ndhC gene − 49046 49408 363 Locate
trnV-UAC gene − 50213 50858 646 Locate
trnM-CAU gene + 51039 51111 73 Locate
atpE gene − 51301 51702 402 Locate
atpB gene − 51699 53195 1497 Locate
rbcL gene + 53993 55426 1434 Locate
accD gene + 56098 57567 1470 Locate
psaI gene + 58031 58141 111 Locate
ycf4 gene + 58585 59139 555 Locate
cemA gene + 59780 60469 690 Locate
petA gene + 60691 61653 963 Locate
psbJ gene − 62658 62780 123 Locate
psbL gene − 62910 63026 117 Locate
psbF gene − 63050 63169 120 Locate
psbE gene − 63184 63435 252 Locate
petL gene + 64320 64415 96 Locate
petG gene + 64593 64706 114 Locate
trnW-CCA gene − 64821 64894 74 Locate
trnP-UGG gene − 65068 65141 74 Locate
psaJ gene + 65420 65554 135 Locate
rpl33 gene + 65993 66193 201 Locate
rps18 gene + 66366 66671 306 Locate
rpl20 gene − 66904 67290 387 Locate
rps12 gene − 68099 68212 114 Locate
clpP gene − 68336 70243 1908 Locate
psbB gene + 70688 72214 1527 Locate
psbT gene + 72405 72506 102 Locate
psbN gene − 72572 72703 132 Locate
psbH gene + 72809 73030 222 Locate
petB gene + 73164 74525 1362 Locate
petD gene + 74713 75896 1184 Locate
rpoA gene − 76073 77080 1008 Locate
rps11 gene − 77150 77566 417 Locate
rpl36 gene − 77678 77791 114 Locate
infA gene − 77887 78120 234 Locate
rps8 gene − 78243 78647 405 Locate
rpl14 gene − 78823 79191 369 Locate
rpl16 gene − 79322 80597 1276 Locate
rps3 gene − 80740 81402 663 Locate
rpl22 gene − 81387 81854 468 Locate
rps19 gene − 81924 82202 279 Locate
rpl2 gene − 82264 83755 1492 Locate
rpl23 gene − 83774 84055 282 Locate
trnI-CAU gene − 84221 84294 74 Locate
ycf2 gene + 84383 91222 6840 Locate
ycf15 gene + 91313 91561 249 Locate
trnL-CAA gene − 91822 91902 81 Locate
ndhB gene − 92462 94615 2154 Locate
rps7 gene − 94944 95411 468 Locate
rps12 gene − 95465 96258 794 Locate
trnV-GAC gene + 97932 98003 72 Locate
rrn16 gene + 98230 99720 1491 Locate
trnI-GAU gene + 100019 101037 1019 Locate
trnA-UGC gene + 101102 101978 877 Locate
rrn23 gene + 102144 104954 2811 Locate
rrn4.5 gene + 105053 105155 103 Locate
rrn5 gene + 105411 105531 121 Locate
trnR-ACG gene + 105775 105848 74 Locate
trnN-GUU gene − 106351 106422 72 Locate
ycf1 gene + 106752 107801 1050 Locate
ndhF gene − 107753 110005 2253 Locate
rpl32 gene + 110461 110631 171 Locate
trnL-UAG gene + 111280 111359 80 Locate
ccsA gene + 111456 112433 978 Locate
ndhD gene − 112671 114212 1542 Locate
psaC gene − 114308 114553 246 Locate
ndhE gene − 114805 115110 306 Locate
ndhG gene − 115323 115853 531 Locate
ndhI gene − 116218 116724 507 Locate
ndhA gene − 116805 118905 2101 Locate
ndhH gene − 118907 120088 1182 Locate
rps15 gene − 120188 120460 273 Locate
ycf1 gene − 120867 126404 5538 Locate
trnN-GUU gene + 126734 126805 72 Locate
trnR-ACG gene − 127308 127381 74 Locate
rrn5 gene − 127625 127745 121 Locate
rrn4.5 gene − 128001 128103 103 Locate
rrn23 gene − 128202 131012 2811 Locate
trnA-UGC gene − 131178 132054 877 Locate
trnI-GAU gene − 132119 133137 1019 Locate
rrn16 gene − 133436 134926 1491 Locate
trnV-GAC gene − 135153 135224 72 Locate
rps12 gene + 136898 137691 794 Locate
rps7 gene + 137745 138212 468 Locate
ndhB gene + 138541 140694 2154 Locate
trnL-CAA gene + 141254 141334 81 Locate
ycf15 gene − 141595 141843 249 Locate
ycf2 gene − 141934 148773 6840 Locate
trnI-CAU gene + 148862 148935 74 Locate
rpl23 gene + 149101 149382 282 Locate
rpl2 gene + 149401 150892 1492 Locate
rps19 gene + 150954 150977 24 Locate
Status Available
Accession MT156369.1
Length 150,977 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources