Salvia verbenaca chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP272176.1 · 11–84 bp · −
psbA · PP272176.1 · 389–1,447 bp · −
trnK-UUU · PP272176.1 · 1,679–4,268 bp · −
matK · PP272176.1 · 1,999–3,528 bp · −
rps16 · PP272176.1 · 4,834–5,933 bp · −
trnQ-UUG · PP272176.1 · 6,483–6,554 bp · −
trnS-GCU · PP272176.1 · 7,777–7,864 bp · −
atpA · PP272176.1 · 9,693–11,216 bp · −
atpF · PP272176.1 · 11,312–12,569 bp · −
atpH · PP272176.1 · 12,841–13,086 bp · −
atpI · PP272176.1 · 14,006–14,749 bp · −
rps2 · PP272176.1 · 14,974–15,684 bp · −
rpoC2 · PP272176.1 · 15,903–20,090 bp · −
rpoC1 · PP272176.1 · 20,235–23,040 bp · −
rpoB · PP272176.1 · 23,067–26,279 bp · −
psbM · PP272176.1 · 28,758–28,862 bp · −
trnD-GUC · PP272176.1 · 29,373–29,446 bp · −
trnY-GUA · PP272176.1 · 29,557–29,640 bp · −
trnE-UUC · PP272176.1 · 29,711–29,783 bp · −
trnS-UGA · PP272176.1 · 34,434–34,526 bp · −
trnfM-CAU · PP272176.1 · 35,568–35,641 bp · −
rps14 · PP272176.1 · 35,786–36,088 bp · −
psaB · PP272176.1 · 36,210–38,414 bp · −
psaA · PP272176.1 · 38,440–40,692 bp · −
ycf3 · PP272176.1 · 41,479–43,436 bp · −
rps4 · PP272176.1 · 44,631–45,236 bp · −
trnT-UGU · PP272176.1 · 45,588–45,660 bp · −
ndhJ · PP272176.1 · 47,909–48,385 bp · −
ndhK · PP272176.1 · 48,502–49,179 bp · −
ndhC · PP272176.1 · 49,231–49,593 bp · −
trnV-UAC · PP272176.1 · 50,560–51,208 bp · −
atpE · PP272176.1 · 51,672–52,073 bp · −
atpB · PP272176.1 · 52,070–53,566 bp · −
psbJ · PP272176.1 · 63,041–63,163 bp · −
psbL · PP272176.1 · 63,293–63,409 bp · −
psbF · PP272176.1 · 63,433–63,552 bp · −
psbE · PP272176.1 · 63,567–63,818 bp · −
trnW-CCA · PP272176.1 · 65,211–65,284 bp · −
trnP-UGG · PP272176.1 · 65,460–65,533 bp · −
rpl20 · PP272176.1 · 67,296–67,682 bp · −
rps12 · PP272176.1 · 68,477–68,590 bp · −
rps12 · PP272176.1 · 95,785–96,578 bp · −
clpP · PP272176.1 · 68,713–70,603 bp · −
psbN · PP272176.1 · 72,929–73,060 bp · −
rpoA · PP272176.1 · 76,433–77,440 bp · −
rps11 · PP272176.1 · 77,511–77,927 bp · −
rpl36 · PP272176.1 · 78,037–78,150 bp · −
infA · PP272176.1 · 78,246–78,479 bp · −
rps8 · PP272176.1 · 78,600–79,004 bp · −
rpl14 · PP272176.1 · 79,175–79,543 bp · −
rpl16 · PP272176.1 · 79,673–80,941 bp · −
rps3 · PP272176.1 · 81,084–81,746 bp · −
rpl22 · PP272176.1 · 81,731–82,198 bp · −
rps19 · PP272176.1 · 82,262–82,540 bp · −
rpl2 · PP272176.1 · 82,600–84,094 bp · −
rpl23 · PP272176.1 · 84,113–84,394 bp · −
trnI-CAU · PP272176.1 · 84,560–84,633 bp · −
trnL-CAA · PP272176.1 · 92,150–92,230 bp · −
ndhB · PP272176.1 · 92,782–94,935 bp · −
rps7 · PP272176.1 · 95,264–95,731 bp · −
trnN-GUU · PP272176.1 · 106,614–106,685 bp · −
ndhF · PP272176.1 · 108,033–110,264 bp · −
ndhD · PP272176.1 · 112,977–114,518 bp · −
psaC · PP272176.1 · 114,615–114,860 bp · −
ndhE · PP272176.1 · 115,111–115,413 bp · −
ndhG · PP272176.1 · 115,638–116,168 bp · −
ndhI · PP272176.1 · 116,542–117,048 bp · −
ndhA · PP272176.1 · 117,124–119,220 bp · −
ndhH · PP272176.1 · 119,222–120,457 bp · −
rps15 · PP272176.1 · 120,503–120,775 bp · −
ycf1 · PP272176.1 · 121,174–126,810 bp · −
trnR-ACG · PP272176.1 · 127,619–127,692 bp · −
rrn5 · PP272176.1 · 127,936–128,056 bp · −
rrn4.5 · PP272176.1 · 128,306–128,408 bp · −
rrn23 · PP272176.1 · 128,509–131,319 bp · −
trnA-UGC · PP272176.1 · 131,480–132,357 bp · −
trnI-GAU · PP272176.1 · 132,422–133,441 bp · −
rrn16 · PP272176.1 · 133,740–135,230 bp · −
trnV-GAC · PP272176.1 · 135,457–135,528 bp · −
ycf15 · PP272176.1 · 141,820–142,017 bp · −
ycf2 · PP272176.1 · 142,159–148,992 bp · −
psbK · PP272176.1 · 6,941–7,120 bp · +
psbI · PP272176.1 · 7,527–7,637 bp · +
trnG-UCC · PP272176.1 · 8,582–9,335 bp · +
trnR-UCU · PP272176.1 · 9,516–9,587 bp · +
trnC-GCA · PP272176.1 · 27,432–27,502 bp · +
petN · PP272176.1 · 27,666–27,755 bp · +
trnT-GGU · PP272176.1 · 30,342–30,413 bp · +
psbD · PP272176.1 · 31,756–32,817 bp · +
psbC · PP272176.1 · 32,765–34,186 bp · +
psbZ · PP272176.1 · 34,856–35,044 bp · +
trnG-GCC · PP272176.1 · 35,320–35,390 bp · +
trnS-GGA · PP272176.1 · 44,277–44,363 bp · +
trnL-UAA · PP272176.1 · 46,328–46,905 bp · +
trnF-GAA · PP272176.1 · 47,189–47,261 bp · +
trnM-CAU · PP272176.1 · 51,389–51,461 bp · +
rbcL · PP272176.1 · 54,344–55,798 bp · +
accD · PP272176.1 · 56,492–57,964 bp · +
psaI · PP272176.1 · 58,433–58,543 bp · +
ycf4 · PP272176.1 · 58,990–59,544 bp · +
cemA · PP272176.1 · 60,182–60,871 bp · +
petA · PP272176.1 · 61,080–62,042 bp · +
petL · PP272176.1 · 64,707–64,802 bp · +
petG · PP272176.1 · 64,982–65,095 bp · +
psaJ · PP272176.1 · 65,804–65,938 bp · +
rpl33 · PP272176.1 · 66,385–66,585 bp · +
rps18 · PP272176.1 · 66,756–67,061 bp · +
rps12 · PP272176.1 · 137,136–137,929 bp · +
psbB · PP272176.1 · 71,057–72,583 bp · +
psbT · PP272176.1 · 72,767–72,868 bp · +
psbH · PP272176.1 · 73,166–73,387 bp · +
petB · PP272176.1 · 73,513–74,886 bp · +
petD · PP272176.1 · 75,074–76,256 bp · +
ycf2 · PP272176.1 · 84,722–91,555 bp · +
ycf15 · PP272176.1 · 91,745–91,894 bp · +
trnV-GAC · PP272176.1 · 98,186–98,257 bp · +
rrn16 · PP272176.1 · 98,484–99,974 bp · +
trnI-GAU · PP272176.1 · 100,273–101,292 bp · +
trnA-UGC · PP272176.1 · 101,357–102,234 bp · +
rrn23 · PP272176.1 · 102,395–105,205 bp · +
rrn4.5 · PP272176.1 · 105,306–105,408 bp · +
rrn5 · PP272176.1 · 105,658–105,778 bp · +
trnR-ACG · PP272176.1 · 106,022–106,095 bp · +
ycf1 · PP272176.1 · 106,904–108,166 bp · +
rpl32 · PP272176.1 · 110,687–110,884 bp · +
trnL-UAG · PP272176.1 · 111,599–111,678 bp · +
ccsA · PP272176.1 · 111,776–112,747 bp · +
trnN-GUU · PP272176.1 · 127,029–127,100 bp · +
rps7 · PP272176.1 · 137,983–138,450 bp · +
ndhB · PP272176.1 · 138,779–140,932 bp · +
trnL-CAA · PP272176.1 · 141,484–141,564 bp · +
trnI-CAU · PP272176.1 · 149,081–149,154 bp · +
rpl23 · PP272176.1 · 149,320–149,601 bp · +
rpl2 · PP272176.1 · 149,620–151,114 bp · +
rps19 · PP272176.1 · 151,174–151,215 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia verbenaca
ANNOTATED PLASTOME
PP272176.1
151,216 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37804 75608 113412 151216 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 389 1447 1059 Locate
trnK-UUU gene − 1679 4268 2590 Locate
matK gene − 1999 3528 1530 Locate
rps16 gene − 4834 5933 1100 Locate
trnQ-UUG gene − 6483 6554 72 Locate
psbK gene + 6941 7120 180 Locate
psbI gene + 7527 7637 111 Locate
trnS-GCU gene − 7777 7864 88 Locate
trnG-UCC gene + 8582 9335 754 Locate
trnR-UCU gene + 9516 9587 72 Locate
atpA gene − 9693 11216 1524 Locate
atpF gene − 11312 12569 1258 Locate
atpH gene − 12841 13086 246 Locate
atpI gene − 14006 14749 744 Locate
rps2 gene − 14974 15684 711 Locate
rpoC2 gene − 15903 20090 4188 Locate
rpoC1 gene − 20235 23040 2806 Locate
rpoB gene − 23067 26279 3213 Locate
trnC-GCA gene + 27432 27502 71 Locate
petN gene + 27666 27755 90 Locate
psbM gene − 28758 28862 105 Locate
trnD-GUC gene − 29373 29446 74 Locate
trnY-GUA gene − 29557 29640 84 Locate
trnE-UUC gene − 29711 29783 73 Locate
trnT-GGU gene + 30342 30413 72 Locate
psbD gene + 31756 32817 1062 Locate
psbC gene + 32765 34186 1422 Locate
trnS-UGA gene − 34434 34526 93 Locate
psbZ gene + 34856 35044 189 Locate
trnG-GCC gene + 35320 35390 71 Locate
trnfM-CAU gene − 35568 35641 74 Locate
rps14 gene − 35786 36088 303 Locate
psaB gene − 36210 38414 2205 Locate
psaA gene − 38440 40692 2253 Locate
ycf3 gene − 41479 43436 1958 Locate
trnS-GGA gene + 44277 44363 87 Locate
rps4 gene − 44631 45236 606 Locate
trnT-UGU gene − 45588 45660 73 Locate
trnL-UAA gene + 46328 46905 578 Locate
trnF-GAA gene + 47189 47261 73 Locate
ndhJ gene − 47909 48385 477 Locate
ndhK gene − 48502 49179 678 Locate
ndhC gene − 49231 49593 363 Locate
trnV-UAC gene − 50560 51208 649 Locate
trnM-CAU gene + 51389 51461 73 Locate
atpE gene − 51672 52073 402 Locate
atpB gene − 52070 53566 1497 Locate
rbcL gene + 54344 55798 1455 Locate
accD gene + 56492 57964 1473 Locate
psaI gene + 58433 58543 111 Locate
ycf4 gene + 58990 59544 555 Locate
cemA gene + 60182 60871 690 Locate
petA gene + 61080 62042 963 Locate
psbJ gene − 63041 63163 123 Locate
psbL gene − 63293 63409 117 Locate
psbF gene − 63433 63552 120 Locate
psbE gene − 63567 63818 252 Locate
petL gene + 64707 64802 96 Locate
petG gene + 64982 65095 114 Locate
trnW-CCA gene − 65211 65284 74 Locate
trnP-UGG gene − 65460 65533 74 Locate
psaJ gene + 65804 65938 135 Locate
rpl33 gene + 66385 66585 201 Locate
rps18 gene + 66756 67061 306 Locate
rpl20 gene − 67296 67682 387 Locate
rps12 gene − 68477 68590 114 Locate
clpP gene − 68713 70603 1891 Locate
psbB gene + 71057 72583 1527 Locate
psbT gene + 72767 72868 102 Locate
psbN gene − 72929 73060 132 Locate
psbH gene + 73166 73387 222 Locate
petB gene + 73513 74886 1374 Locate
petD gene + 75074 76256 1183 Locate
rpoA gene − 76433 77440 1008 Locate
rps11 gene − 77511 77927 417 Locate
rpl36 gene − 78037 78150 114 Locate
infA gene − 78246 78479 234 Locate
rps8 gene − 78600 79004 405 Locate
rpl14 gene − 79175 79543 369 Locate
rpl16 gene − 79673 80941 1269 Locate
rps3 gene − 81084 81746 663 Locate
rpl22 gene − 81731 82198 468 Locate
rps19 gene − 82262 82540 279 Locate
rpl2 gene − 82600 84094 1495 Locate
rpl23 gene − 84113 84394 282 Locate
trnI-CAU gene − 84560 84633 74 Locate
ycf2 gene + 84722 91555 6834 Locate
ycf15 gene + 91745 91894 150 Locate
trnL-CAA gene − 92150 92230 81 Locate
ndhB gene − 92782 94935 2154 Locate
rps7 gene − 95264 95731 468 Locate
rps12 gene − 95785 96578 794 Locate
trnV-GAC gene + 98186 98257 72 Locate
rrn16 gene + 98484 99974 1491 Locate
trnI-GAU gene + 100273 101292 1020 Locate
trnA-UGC gene + 101357 102234 878 Locate
rrn23 gene + 102395 105205 2811 Locate
rrn4.5 gene + 105306 105408 103 Locate
rrn5 gene + 105658 105778 121 Locate
trnR-ACG gene + 106022 106095 74 Locate
trnN-GUU gene − 106614 106685 72 Locate
ycf1 gene + 106904 108166 1263 Locate
ndhF gene − 108033 110264 2232 Locate
rpl32 gene + 110687 110884 198 Locate
trnL-UAG gene + 111599 111678 80 Locate
ccsA gene + 111776 112747 972 Locate
ndhD gene − 112977 114518 1542 Locate
psaC gene − 114615 114860 246 Locate
ndhE gene − 115111 115413 303 Locate
ndhG gene − 115638 116168 531 Locate
ndhI gene − 116542 117048 507 Locate
ndhA gene − 117124 119220 2097 Locate
ndhH gene − 119222 120457 1236 Locate
rps15 gene − 120503 120775 273 Locate
ycf1 gene − 121174 126810 5637 Locate
trnN-GUU gene + 127029 127100 72 Locate
trnR-ACG gene − 127619 127692 74 Locate
rrn5 gene − 127936 128056 121 Locate
rrn4.5 gene − 128306 128408 103 Locate
rrn23 gene − 128509 131319 2811 Locate
trnA-UGC gene − 131480 132357 878 Locate
trnI-GAU gene − 132422 133441 1020 Locate
rrn16 gene − 133740 135230 1491 Locate
trnV-GAC gene − 135457 135528 72 Locate
rps12 gene + 137136 137929 794 Locate
rps7 gene + 137983 138450 468 Locate
ndhB gene + 138779 140932 2154 Locate
trnL-CAA gene + 141484 141564 81 Locate
ycf15 gene − 141820 142017 198 Locate
ycf2 gene − 142159 148992 6834 Locate
trnI-CAU gene + 149081 149154 74 Locate
rpl23 gene + 149320 149601 282 Locate
rpl2 gene + 149620 151114 1495 Locate
rps19 gene + 151174 151215 42 Locate
Status Available
Accession PP272176.1
Length 151,216 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources