Coordinate-aware organelle record

Salvia verticillata chloroplast genome

Available PV340582.1 151,321 bp 123 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 8-81 bp · − strandpsbA · gene · 385-1,443 bp · − strandtrnK-UUU · gene · 1,671-4,270 bp · − strandmatK · gene · 1,990-3,531 bp · − strandrps16 · gene · 4,831-5,940 bp · − strandtrnQ-UUG · gene · 6,504-6,575 bp · − strandpsbK · gene · 6,961-7,140 bp · + strandpsbI · gene · 7,525-7,635 bp · + strandtrnS-GCU · gene · 7,790-7,877 bp · − strandtrnG-UCC · gene · 8,589-9,342 bp · + strandtrnR-UCU · gene · 9,523-9,594 bp · + strandATPA · gene · 9,700-11,223 bp · − strandATPF · gene · 11,326-12,577 bp · − strandATPH · gene · 12,853-13,098 bp · − strandATPI · gene · 14,132-14,875 bp · − strandrps2 · gene · 15,107-15,817 bp · − strandrpoC2 · gene · 16,035-20,222 bp · − strandrpoC1 · gene · 20,387-23,216 bp · − strandrpoB · gene · 23,243-26,455 bp · − strandtrnC-GCA · gene · 27,609-27,679 bp · + strandpetN · gene · 27,843-27,932 bp · + strandpsbM · gene · 28,894-28,998 bp · − strandtrnD-GUC · gene · 29,509-29,582 bp · − strandtrnY-GUA · gene · 29,693-29,776 bp · − strandtrnE-UUC · gene · 29,847-29,919 bp · − strandtrnT-GGU · gene · 30,486-30,557 bp · + strandpsbD · gene · 31,916-32,977 bp · + strandpsbC · gene · 32,925-34,346 bp · + strandtrnS-UGA · gene · 34,591-34,683 bp · − strandpsbZ · gene · 35,019-35,207 bp · + strandtrnG-GCC · gene · 35,484-35,554 bp · + strandtrnfM-CAU · gene · 35,727-35,800 bp · − strandrps14 · gene · 35,945-36,247 bp · − strandpsaB · gene · 36,370-38,574 bp · − strandpsaA · gene · 38,600-40,852 bp · − strandycf3 · gene · 41,633-43,589 bp · − strandtrnS-GGA · gene · 44,414-44,500 bp · + strandrps4 · gene · 44,768-45,373 bp · − strandtrnT-UGU · gene · 45,724-45,796 bp · − strandtrnL-UAA · gene · 46,402-46,978 bp · + strandtrnF-GAA · gene · 47,271-47,343 bp · + strandndhJ · gene · 47,984-48,478 bp · − strandndhK · gene · 48,571-49,248 bp · − strandndhC · gene · 49,300-49,662 bp · − strandtrnV-UAC · gene · 50,611-51,258 bp · − strandtrnM-CAU · gene · 51,439-51,511 bp · + strandATPE · gene · 51,722-52,123 bp · − strandATPB · gene · 52,120-53,616 bp · − strandrbcL · gene · 54,394-55,848 bp · + strandaccD · gene · 56,628-58,037 bp · + strandpsaI · gene · 58,505-58,615 bp · + strandycf4 · gene · 59,061-59,615 bp · + strandcemA · gene · 60,278-60,967 bp · + strandpetA · gene · 61,175-62,137 bp · + strandpsbJ · gene · 63,054-63,176 bp · − strandpsbL · gene · 63,306-63,422 bp · − strandpsbF · gene · 63,453-63,572 bp · − strandpsbE · gene · 63,587-63,838 bp · − strandpetL · gene · 64,742-64,837 bp · + strandpetG · gene · 65,015-65,128 bp · + strandtrnW-CCA · gene · 65,243-65,316 bp · − strandtrnP-UGG · gene · 65,490-65,563 bp · − strandpsaJ · gene · 65,839-65,973 bp · + strandrpl33 · gene · 66,418-66,618 bp · + strandrps18 · gene · 66,794-67,099 bp · + strandrpl20 · gene · 67,334-67,720 bp · − strandrps12 · gene · 68,527-96,684 bp · − strandrps12 · gene · 68,527-138,036 bp · + strandclpP · gene · 68,760-70,661 bp · − strandpsbB · gene · 71,115-72,641 bp · + strandpsbT · gene · 72,828-72,935 bp · + strandpsbN · gene · 72,996-73,127 bp · − strandpsbH · gene · 73,215-73,454 bp · + strandpetB · gene · 73,580-74,951 bp · + strandpetD · gene · 75,153-76,339 bp · + strandrpoA · gene · 76,516-77,523 bp · − strandrps11 · gene · 77,594-78,010 bp · − strandrpl36 · gene · 78,120-78,233 bp · − strandinfA · gene · 78,329-78,562 bp · − strandrps8 · gene · 78,683-79,087 bp · − strandrpl14 · gene · 79,269-79,637 bp · − strandrpl16 · gene · 79,766-81,035 bp · − strandrps3 · gene · 81,189-81,851 bp · − strandrpl22 · gene · 81,836-82,303 bp · − strandrps19 · gene · 82,373-82,651 bp · − strandrpl2 · gene · 82,712-84,199 bp · − strandrpl23 · gene · 84,218-84,499 bp · − strandtrnI-CAU · gene · 84,665-84,738 bp · − strandycf2 · gene · 84,827-91,666 bp · + strandycf15 · gene · 91,808-91,945 bp · + strandtrnL-CAA · gene · 92,256-92,336 bp · − strandndhB · gene · 92,888-95,095 bp · − strandrps7 · gene · 95,370-95,837 bp · − strandtrnV-GAC · gene · 98,302-98,373 bp · + strandtrnI-GAU · gene · 100,389-101,408 bp · + strandtrnA-UGC · gene · 101,481-102,358 bp · + strandtrnR-ACG · gene · 106,150-106,223 bp · + strandtrnN-GUU · gene · 106,742-106,813 bp · − strandycf1 · gene · 107,032-112,647 bp · + strandrps15 · gene · 113,049-113,321 bp · + strandndhA · gene · 114,604-116,699 bp · + strandndhI · gene · 116,780-117,286 bp · + strandndhG · gene · 117,665-118,195 bp · + strandndhE · gene · 118,419-118,724 bp · + strandpsaC · gene · 118,975-119,220 bp · + strandndhD · gene · 119,316-120,857 bp · + strandccsA · gene · 121,026-121,997 bp · − strandtrnL-UAG · gene · 122,095-122,174 bp · − strandrpl32 · gene · 122,900-123,097 bp · − strandndhF · gene · 123,529-125,760 bp · + strandtrnN-GUU · gene · 127,114-127,185 bp · + strandtrnR-ACG · gene · 127,704-127,777 bp · − strandtrnA-UGC · gene · 131,569-132,446 bp · − strandtrnI-GAU · gene · 132,519-133,538 bp · − strandtrnV-GAC · gene · 135,554-135,625 bp · − strandrps7 · gene · 138,090-138,557 bp · + strandndhB · gene · 138,832-141,039 bp · + strandtrnL-CAA · gene · 141,591-141,671 bp · + strandycf15 · gene · 141,982-142,119 bp · − strandycf2 · gene · 142,261-149,100 bp · − strandtrnI-CAU · gene · 149,189-149,262 bp · + strandrpl23 · gene · 149,428-149,709 bp · + strandrpl2 · gene · 149,728-151,215 bp · + strandSalvia verticillataANNOTATED PLASTOMEPV340582.1151,321 bp · 123 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseVerified annotationSource: NCBI GenBankAccession: PV340582.1Features: 123 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

123 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−78174
psbAgenephotosystem-ii−38414431059
trnK-UUUgenetranslation-rna−167042702600
matKgeneother−198935311542
rps16generibosomal-protein−483059401110
trnQ-UUGgenetranslation-rna−6503657572
psbKgenephotosystem-ii+69607140180
psbIgenephotosystem-ii+75247635111
trnS-GCUgenetranslation-rna−7789787788
trnG-UCCgenetranslation-rna+85889342754
trnR-UCUgenetranslation-rna+9522959472
ATPAgeneatp-synthase−9699112231524
ATPFgeneatp-synthase−11325125771252
ATPHgeneatp-synthase−1285213098246
ATPIgeneatp-synthase−1413114875744
rps2generibosomal-protein−1510615817711
rpoC2generna-polymerase−16034202224188
rpoC1generna-polymerase−20386232162830
rpoBgenerna-polymerase−23242264553213
trnC-GCAgenetranslation-rna+276082767971
petNgenecytochrome+278422793290
psbMgenephotosystem-ii−2889328998105
trnD-GUCgenetranslation-rna−295082958274
trnY-GUAgenetranslation-rna−296922977684
trnE-UUCgenetranslation-rna−298462991973
trnT-GGUgenetranslation-rna+304853055772
psbDgenephotosystem-ii+31915329771062
psbCgenephotosystem-ii+32924343461422
trnS-UGAgenetranslation-rna−345903468393
psbZgenephotosystem-ii+3501835207189
trnG-GCCgenetranslation-rna+354833555471
trnfM-CAUgenetranslation-rna−357263580074
rps14generibosomal-protein−3594436247303
psaBgenephotosystem-i−36369385742205
psaAgenephotosystem-i−38599408522253
ycf3geneother−41632435891957
trnS-GGAgenetranslation-rna+444134450087
rps4generibosomal-protein−4476745373606
trnT-UGUgenetranslation-rna−457234579673
trnL-UAAgenetranslation-rna+4640146978577
trnF-GAAgenetranslation-rna+472704734373
ndhJgenenad-dehydrogenase−4798348478495
ndhKgenenad-dehydrogenase−4857049248678
ndhCgenenad-dehydrogenase−4929949662363
trnV-UACgenetranslation-rna−5061051258648
trnM-CAUgenetranslation-rna+514385151173
ATPEgeneatp-synthase−5172152123402
ATPBgeneatp-synthase−52119536161497
rbcLgeneother+54393558481455
accDgeneother+56627580371410
psaIgenephotosystem-i+5850458615111
ycf4geneother+5906059615555
cemAgeneother+6027760967690
petAgenecytochrome+6117462137963
psbJgenephotosystem-ii−6305363176123
psbLgenephotosystem-ii−6330563422117
psbFgenephotosystem-ii−6345263572120
psbEgenephotosystem-ii−6358663838252
petLgenecytochrome+647416483796
petGgenecytochrome+6501465128114
trnW-CCAgenetranslation-rna−652426531674
trnP-UGGgenetranslation-rna−654896556374
psaJgenephotosystem-i+6583865973135
rpl33generibosomal-protein+6641766618201
rps18generibosomal-protein+6679367099306
rpl20generibosomal-protein−6733367720387
rps12generibosomal-protein−685269668428158
rps12generibosomal-protein+6852613803669510
clpPgeneother−68759706611902
psbBgenephotosystem-ii+71114726411527
psbTgenephotosystem-ii+7282772935108
psbNgenephotosystem-ii−7299573127132
psbHgenephotosystem-ii+7321473454240
petBgenecytochrome+73579749511372
petDgenecytochrome+75152763391187
rpoAgenerna-polymerase−76515775231008
rps11generibosomal-protein−7759378010417
rpl36generibosomal-protein−7811978233114
infAgeneother−7832878562234
rps8generibosomal-protein−7868279087405
rpl14generibosomal-protein−7926879637369
rpl16generibosomal-protein−79765810351270
rps3generibosomal-protein−8118881851663
rpl22generibosomal-protein−8183582303468
rps19generibosomal-protein−8237282651279
rpl2generibosomal-protein−82711841991488
rpl23generibosomal-protein−8421784499282
trnI-CAUgenetranslation-rna−846648473874
ycf2geneother+84826916666840
ycf15geneother+9180791945138
trnL-CAAgenetranslation-rna−922559233681
ndhBgenenad-dehydrogenase−92887950952208
rps7generibosomal-protein−9536995837468
trnV-GACgenetranslation-rna+983019837372
trnI-GAUgenetranslation-rna+1003881014081020
trnA-UGCgenetranslation-rna+101480102358878
trnR-ACGgenetranslation-rna+10614910622374
trnN-GUUgenetranslation-rna−10674110681372
ycf1geneother+1070311126475616
rps15generibosomal-protein+113048113321273
ndhAgenenad-dehydrogenase+1146031166992096
ndhIgenenad-dehydrogenase+116779117286507
ndhGgenenad-dehydrogenase+117664118195531
ndhEgenenad-dehydrogenase+118418118724306
psaCgenephotosystem-i+118974119220246
ndhDgenenad-dehydrogenase+1193151208571542
ccsAgeneother−121025121997972
trnL-UAGgenetranslation-rna−12209412217480
rpl32generibosomal-protein−122899123097198
ndhFgenenad-dehydrogenase+1235281257602232
trnN-GUUgenetranslation-rna+12711312718572
trnR-ACGgenetranslation-rna−12770312777774
trnA-UGCgenetranslation-rna−131568132446878
trnI-GAUgenetranslation-rna−1325181335381020
trnV-GACgenetranslation-rna−13555313562572
rps7generibosomal-protein+138089138557468
ndhBgenenad-dehydrogenase+1388311410392208
trnL-CAAgenetranslation-rna+14159014167181
ycf15geneother−141981142119138
ycf2geneother−1422601491006840
trnI-CAUgenetranslation-rna+14918814926274
rpl23generibosomal-protein+149427149709282
rpl2generibosomal-protein+1497271512151488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources