Salvia verticillata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV340582.1 · 8–81 bp · −
psbA · PV340582.1 · 385–1,443 bp · −
trnK-UUU · PV340582.1 · 1,671–4,270 bp · −
matK · PV340582.1 · 1,990–3,531 bp · −
rps16 · PV340582.1 · 4,831–5,940 bp · −
trnQ-UUG · PV340582.1 · 6,504–6,575 bp · −
trnS-GCU · PV340582.1 · 7,790–7,877 bp · −
ATPA · PV340582.1 · 9,700–11,223 bp · −
ATPF · PV340582.1 · 11,326–12,577 bp · −
ATPH · PV340582.1 · 12,853–13,098 bp · −
ATPI · PV340582.1 · 14,132–14,875 bp · −
rps2 · PV340582.1 · 15,107–15,817 bp · −
rpoC2 · PV340582.1 · 16,035–20,222 bp · −
rpoC1 · PV340582.1 · 20,387–23,216 bp · −
rpoB · PV340582.1 · 23,243–26,455 bp · −
psbM · PV340582.1 · 28,894–28,998 bp · −
trnD-GUC · PV340582.1 · 29,509–29,582 bp · −
trnY-GUA · PV340582.1 · 29,693–29,776 bp · −
trnE-UUC · PV340582.1 · 29,847–29,919 bp · −
trnS-UGA · PV340582.1 · 34,591–34,683 bp · −
trnfM-CAU · PV340582.1 · 35,727–35,800 bp · −
rps14 · PV340582.1 · 35,945–36,247 bp · −
psaB · PV340582.1 · 36,370–38,574 bp · −
psaA · PV340582.1 · 38,600–40,852 bp · −
ycf3 · PV340582.1 · 41,633–43,589 bp · −
rps4 · PV340582.1 · 44,768–45,373 bp · −
trnT-UGU · PV340582.1 · 45,724–45,796 bp · −
ndhJ · PV340582.1 · 47,984–48,478 bp · −
ndhK · PV340582.1 · 48,571–49,248 bp · −
ndhC · PV340582.1 · 49,300–49,662 bp · −
trnV-UAC · PV340582.1 · 50,611–51,258 bp · −
ATPE · PV340582.1 · 51,722–52,123 bp · −
ATPB · PV340582.1 · 52,120–53,616 bp · −
psbJ · PV340582.1 · 63,054–63,176 bp · −
psbL · PV340582.1 · 63,306–63,422 bp · −
psbF · PV340582.1 · 63,453–63,572 bp · −
psbE · PV340582.1 · 63,587–63,838 bp · −
trnW-CCA · PV340582.1 · 65,243–65,316 bp · −
trnP-UGG · PV340582.1 · 65,490–65,563 bp · −
rpl20 · PV340582.1 · 67,334–67,720 bp · −
rps12 · PV340582.1 · 68,527–68,640 bp · −
rps12 · PV340582.1 · 95,891–96,684 bp · −
clpP · PV340582.1 · 68,760–70,661 bp · −
psbN · PV340582.1 · 72,996–73,127 bp · −
rpoA · PV340582.1 · 76,516–77,523 bp · −
rps11 · PV340582.1 · 77,594–78,010 bp · −
rpl36 · PV340582.1 · 78,120–78,233 bp · −
infA · PV340582.1 · 78,329–78,562 bp · −
rps8 · PV340582.1 · 78,683–79,087 bp · −
rpl14 · PV340582.1 · 79,269–79,637 bp · −
rpl16 · PV340582.1 · 79,766–81,035 bp · −
rps3 · PV340582.1 · 81,189–81,851 bp · −
rpl22 · PV340582.1 · 81,836–82,303 bp · −
rps19 · PV340582.1 · 82,373–82,651 bp · −
rpl2 · PV340582.1 · 82,712–84,199 bp · −
rpl23 · PV340582.1 · 84,218–84,499 bp · −
trnI-CAU · PV340582.1 · 84,665–84,738 bp · −
trnL-CAA · PV340582.1 · 92,256–92,336 bp · −
ndhB · PV340582.1 · 92,888–95,095 bp · −
rps7 · PV340582.1 · 95,370–95,837 bp · −
trnN-GUU · PV340582.1 · 106,742–106,813 bp · −
ccsA · PV340582.1 · 121,026–121,997 bp · −
trnL-UAG · PV340582.1 · 122,095–122,174 bp · −
rpl32 · PV340582.1 · 122,900–123,097 bp · −
trnR-ACG · PV340582.1 · 127,704–127,777 bp · −
trnA-UGC · PV340582.1 · 131,569–132,446 bp · −
trnI-GAU · PV340582.1 · 132,519–133,538 bp · −
trnV-GAC · PV340582.1 · 135,554–135,625 bp · −
ycf15 · PV340582.1 · 141,982–142,119 bp · −
ycf2 · PV340582.1 · 142,261–149,100 bp · −
psbK · PV340582.1 · 6,961–7,140 bp · +
psbI · PV340582.1 · 7,525–7,635 bp · +
trnG-UCC · PV340582.1 · 8,589–9,342 bp · +
trnR-UCU · PV340582.1 · 9,523–9,594 bp · +
trnC-GCA · PV340582.1 · 27,609–27,679 bp · +
petN · PV340582.1 · 27,843–27,932 bp · +
trnT-GGU · PV340582.1 · 30,486–30,557 bp · +
psbD · PV340582.1 · 31,916–32,977 bp · +
psbC · PV340582.1 · 32,925–34,346 bp · +
psbZ · PV340582.1 · 35,019–35,207 bp · +
trnG-GCC · PV340582.1 · 35,484–35,554 bp · +
trnS-GGA · PV340582.1 · 44,414–44,500 bp · +
trnL-UAA · PV340582.1 · 46,402–46,978 bp · +
trnF-GAA · PV340582.1 · 47,271–47,343 bp · +
trnM-CAU · PV340582.1 · 51,439–51,511 bp · +
rbcL · PV340582.1 · 54,394–55,848 bp · +
accD · PV340582.1 · 56,628–58,037 bp · +
psaI · PV340582.1 · 58,505–58,615 bp · +
ycf4 · PV340582.1 · 59,061–59,615 bp · +
cemA · PV340582.1 · 60,278–60,967 bp · +
petA · PV340582.1 · 61,175–62,137 bp · +
petL · PV340582.1 · 64,742–64,837 bp · +
petG · PV340582.1 · 65,015–65,128 bp · +
psaJ · PV340582.1 · 65,839–65,973 bp · +
rpl33 · PV340582.1 · 66,418–66,618 bp · +
rps18 · PV340582.1 · 66,794–67,099 bp · +
rps12 · PV340582.1 · 137,243–138,036 bp · +
psbB · PV340582.1 · 71,115–72,641 bp · +
psbT · PV340582.1 · 72,828–72,935 bp · +
psbH · PV340582.1 · 73,215–73,454 bp · +
petB · PV340582.1 · 73,580–74,951 bp · +
petD · PV340582.1 · 75,153–76,339 bp · +
ycf2 · PV340582.1 · 84,827–91,666 bp · +
ycf15 · PV340582.1 · 91,808–91,945 bp · +
trnV-GAC · PV340582.1 · 98,302–98,373 bp · +
trnI-GAU · PV340582.1 · 100,389–101,408 bp · +
trnA-UGC · PV340582.1 · 101,481–102,358 bp · +
trnR-ACG · PV340582.1 · 106,150–106,223 bp · +
ycf1 · PV340582.1 · 107,032–112,647 bp · +
rps15 · PV340582.1 · 113,049–113,321 bp · +
ndhA · PV340582.1 · 114,604–116,699 bp · +
ndhI · PV340582.1 · 116,780–117,286 bp · +
ndhG · PV340582.1 · 117,665–118,195 bp · +
ndhE · PV340582.1 · 118,419–118,724 bp · +
psaC · PV340582.1 · 118,975–119,220 bp · +
ndhD · PV340582.1 · 119,316–120,857 bp · +
ndhF · PV340582.1 · 123,529–125,760 bp · +
trnN-GUU · PV340582.1 · 127,114–127,185 bp · +
rps7 · PV340582.1 · 138,090–138,557 bp · +
ndhB · PV340582.1 · 138,832–141,039 bp · +
trnL-CAA · PV340582.1 · 141,591–141,671 bp · +
trnI-CAU · PV340582.1 · 149,189–149,262 bp · +
rpl23 · PV340582.1 · 149,428–149,709 bp · +
rpl2 · PV340582.1 · 149,728–151,215 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia verticillata
ANNOTATED PLASTOME
PV340582.1
151,321 bp · 123 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
0 37830 75660 113491 151321 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC trnI-GAU trnA-UGC trnR-ACG ycf1 rps15 ndhA ndhI ndhG ndhE psaC ndhD ndhF trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU ATPA ATPF ATPH ATPI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC ATPE ATPB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ccsA trnL-UAG rpl32 trnR-ACG trnA-UGC trnI-GAU trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
124 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 8 81 74 Locate
psbA gene − 385 1443 1059 Locate
trnK-UUU gene − 1671 4270 2600 Locate
matK gene − 1990 3531 1542 Locate
rps16 gene − 4831 5940 1110 Locate
trnQ-UUG gene − 6504 6575 72 Locate
psbK gene + 6961 7140 180 Locate
psbI gene + 7525 7635 111 Locate
trnS-GCU gene − 7790 7877 88 Locate
trnG-UCC gene + 8589 9342 754 Locate
trnR-UCU gene + 9523 9594 72 Locate
ATPA gene − 9700 11223 1524 Locate
ATPF gene − 11326 12577 1252 Locate
ATPH gene − 12853 13098 246 Locate
ATPI gene − 14132 14875 744 Locate
rps2 gene − 15107 15817 711 Locate
rpoC2 gene − 16035 20222 4188 Locate
rpoC1 gene − 20387 23216 2830 Locate
rpoB gene − 23243 26455 3213 Locate
trnC-GCA gene + 27609 27679 71 Locate
petN gene + 27843 27932 90 Locate
psbM gene − 28894 28998 105 Locate
trnD-GUC gene − 29509 29582 74 Locate
trnY-GUA gene − 29693 29776 84 Locate
trnE-UUC gene − 29847 29919 73 Locate
trnT-GGU gene + 30486 30557 72 Locate
psbD gene + 31916 32977 1062 Locate
psbC gene + 32925 34346 1422 Locate
trnS-UGA gene − 34591 34683 93 Locate
psbZ gene + 35019 35207 189 Locate
trnG-GCC gene + 35484 35554 71 Locate
trnfM-CAU gene − 35727 35800 74 Locate
rps14 gene − 35945 36247 303 Locate
psaB gene − 36370 38574 2205 Locate
psaA gene − 38600 40852 2253 Locate
ycf3 gene − 41633 43589 1957 Locate
trnS-GGA gene + 44414 44500 87 Locate
rps4 gene − 44768 45373 606 Locate
trnT-UGU gene − 45724 45796 73 Locate
trnL-UAA gene + 46402 46978 577 Locate
trnF-GAA gene + 47271 47343 73 Locate
ndhJ gene − 47984 48478 495 Locate
ndhK gene − 48571 49248 678 Locate
ndhC gene − 49300 49662 363 Locate
trnV-UAC gene − 50611 51258 648 Locate
trnM-CAU gene + 51439 51511 73 Locate
ATPE gene − 51722 52123 402 Locate
ATPB gene − 52120 53616 1497 Locate
rbcL gene + 54394 55848 1455 Locate
accD gene + 56628 58037 1410 Locate
psaI gene + 58505 58615 111 Locate
ycf4 gene + 59061 59615 555 Locate
cemA gene + 60278 60967 690 Locate
petA gene + 61175 62137 963 Locate
psbJ gene − 63054 63176 123 Locate
psbL gene − 63306 63422 117 Locate
psbF gene − 63453 63572 120 Locate
psbE gene − 63587 63838 252 Locate
petL gene + 64742 64837 96 Locate
petG gene + 65015 65128 114 Locate
trnW-CCA gene − 65243 65316 74 Locate
trnP-UGG gene − 65490 65563 74 Locate
psaJ gene + 65839 65973 135 Locate
rpl33 gene + 66418 66618 201 Locate
rps18 gene + 66794 67099 306 Locate
rpl20 gene − 67334 67720 387 Locate
rps12 gene − 68527 68640 114 Locate
clpP gene − 68760 70661 1902 Locate
psbB gene + 71115 72641 1527 Locate
psbT gene + 72828 72935 108 Locate
psbN gene − 72996 73127 132 Locate
psbH gene + 73215 73454 240 Locate
petB gene + 73580 74951 1372 Locate
petD gene + 75153 76339 1187 Locate
rpoA gene − 76516 77523 1008 Locate
rps11 gene − 77594 78010 417 Locate
rpl36 gene − 78120 78233 114 Locate
infA gene − 78329 78562 234 Locate
rps8 gene − 78683 79087 405 Locate
rpl14 gene − 79269 79637 369 Locate
rpl16 gene − 79766 81035 1270 Locate
rps3 gene − 81189 81851 663 Locate
rpl22 gene − 81836 82303 468 Locate
rps19 gene − 82373 82651 279 Locate
rpl2 gene − 82712 84199 1488 Locate
rpl23 gene − 84218 84499 282 Locate
trnI-CAU gene − 84665 84738 74 Locate
ycf2 gene + 84827 91666 6840 Locate
ycf15 gene + 91808 91945 138 Locate
trnL-CAA gene − 92256 92336 81 Locate
ndhB gene − 92888 95095 2208 Locate
rps7 gene − 95370 95837 468 Locate
rps12 gene − 95891 96684 794 Locate
trnV-GAC gene + 98302 98373 72 Locate
trnI-GAU gene + 100389 101408 1020 Locate
trnA-UGC gene + 101481 102358 878 Locate
trnR-ACG gene + 106150 106223 74 Locate
trnN-GUU gene − 106742 106813 72 Locate
ycf1 gene + 107032 112647 5616 Locate
rps15 gene + 113049 113321 273 Locate
ndhA gene + 114604 116699 2096 Locate
ndhI gene + 116780 117286 507 Locate
ndhG gene + 117665 118195 531 Locate
ndhE gene + 118419 118724 306 Locate
psaC gene + 118975 119220 246 Locate
ndhD gene + 119316 120857 1542 Locate
ccsA gene − 121026 121997 972 Locate
trnL-UAG gene − 122095 122174 80 Locate
rpl32 gene − 122900 123097 198 Locate
ndhF gene + 123529 125760 2232 Locate
trnN-GUU gene + 127114 127185 72 Locate
trnR-ACG gene − 127704 127777 74 Locate
trnA-UGC gene − 131569 132446 878 Locate
trnI-GAU gene − 132519 133538 1020 Locate
trnV-GAC gene − 135554 135625 72 Locate
rps12 gene + 137243 138036 794 Locate
rps7 gene + 138090 138557 468 Locate
ndhB gene + 138832 141039 2208 Locate
trnL-CAA gene + 141591 141671 81 Locate
ycf15 gene − 141982 142119 138 Locate
ycf2 gene − 142261 149100 6840 Locate
trnI-CAU gene + 149189 149262 74 Locate
rpl23 gene + 149428 149709 282 Locate
rpl2 gene + 149728 151215 1488 Locate
Status Available
Accession PV340582.1
Length 151,321 bp
GC content 38.0%
Annotated genes 123
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 11
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources