LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Salvia yunnanensis chloroplast dna

Available NC_050903.1 151,413 bp 132 genes
DNA resources Accession record
Salvia yunnanensis chloroplast Biopython GenomeDiagram 1.79; GenBank local location segments. LSC IR SSC IR trnH-GUG · NC_050903.1 · 11–84 bp · − psbA · NC_050903.1 · 391–1,449 bp · − trnK-UUU · NC_050903.1 · 1,664–4,263 bp · − matK · NC_050903.1 · 1,969–3,531 bp · − rps16 · NC_050903.1 · 4,831–5,941 bp · − trnQ-UUG · NC_050903.1 · 6,891–6,962 bp · − trnS-GCU · NC_050903.1 · 8,229–8,316 bp · − atpA · NC_050903.1 · 10,125–11,648 bp · − atpF · NC_050903.1 · 11,736–12,984 bp · − atpH · NC_050903.1 · 13,257–13,502 bp · − atpI · NC_050903.1 · 14,473–15,216 bp · − rps2 · NC_050903.1 · 15,442–16,152 bp · − rpoC2 · NC_050903.1 · 16,361–20,548 bp · − rpoC1 · NC_050903.1 · 20,706–23,519 bp · − rpoB · NC_050903.1 · 23,546–26,758 bp · − psbM · NC_050903.1 · 29,202–29,306 bp · − trnD-GUC · NC_050903.1 · 29,827–29,900 bp · − trnY-GUA · NC_050903.1 · 30,011–30,094 bp · − trnE-UUC · NC_050903.1 · 30,166–30,238 bp · − trnS-UGA · NC_050903.1 · 34,913–35,005 bp · − trnfM-CAU · NC_050903.1 · 36,027–36,100 bp · − rps14 · NC_050903.1 · 36,245–36,547 bp · − psaB · NC_050903.1 · 36,670–38,874 bp · − psaA · NC_050903.1 · 38,900–41,152 bp · − ycf3 · NC_050903.1 · 41,935–43,871 bp · − rps4 · NC_050903.1 · 45,056–45,661 bp · − trnT-UGU · NC_050903.1 · 46,029–46,101 bp · − ndhJ · NC_050903.1 · 48,135–48,629 bp · − ndhK · NC_050903.1 · 48,722–49,399 bp · − ndhC · NC_050903.1 · 49,449–49,811 bp · − trnV-UAC · NC_050903.1 · 50,765–51,413 bp · − atpE · NC_050903.1 · 51,862–52,263 bp · − atpB · NC_050903.1 · 52,260–53,756 bp · − psbJ · NC_050903.1 · 63,211–63,333 bp · − psbL · NC_050903.1 · 63,463–63,579 bp · − psbF · NC_050903.1 · 63,603–63,722 bp · − psbE · NC_050903.1 · 63,737–63,988 bp · − trnW-CCA · NC_050903.1 · 65,297–65,370 bp · − trnP-UGG · NC_050903.1 · 65,541–65,614 bp · − rpl20 · NC_050903.1 · 67,396–67,782 bp · − rps12 · NC_050903.1 · 68,576–68,689 bp · − rps12 · NC_050903.1 · 95,945–96,728 bp · − clpP · NC_050903.1 · 68,813–70,724 bp · − psbN · NC_050903.1 · 73,046–73,177 bp · − rpoA · NC_050903.1 · 76,547–77,554 bp · − rps11 · NC_050903.1 · 77,626–78,042 bp · − rpl36 · NC_050903.1 · 78,152–78,265 bp · − infA · NC_050903.1 · 78,361–78,594 bp · − rps8 · NC_050903.1 · 78,721–79,125 bp · − rpl14 · NC_050903.1 · 79,315–79,683 bp · − rpl16 · NC_050903.1 · 79,815–81,101 bp · − rps3 · NC_050903.1 · 81,237–81,899 bp · − rpl22 · NC_050903.1 · 81,884–82,351 bp · − rps19 · NC_050903.1 · 82,421–82,699 bp · − rpl2 · NC_050903.1 · 82,759–84,241 bp · − rpl23 · NC_050903.1 · 84,260–84,541 bp · − trnI-CAU · NC_050903.1 · 84,707–84,780 bp · − trnL-CAA · NC_050903.1 · 92,302–92,382 bp · − ndhB · NC_050903.1 · 92,942–95,095 bp · − rps7 · NC_050903.1 · 95,424–95,891 bp · − trnN-GUU · NC_050903.1 · 106,790–106,861 bp · − ndhF · NC_050903.1 · 108,215–110,449 bp · − ndhD · NC_050903.1 · 113,141–114,682 bp · − psaC · NC_050903.1 · 114,797–115,042 bp · − ndhE · NC_050903.1 · 115,293–115,598 bp · − ndhG · NC_050903.1 · 115,814–116,344 bp · − ndhI · NC_050903.1 · 116,727–117,233 bp · − ndhA · NC_050903.1 · 117,314–119,390 bp · − ndhH · NC_050903.1 · 119,392–120,627 bp · − rps15 · NC_050903.1 · 120,673–120,945 bp · − ycf1 · NC_050903.1 · 121,372–126,990 bp · − trnR-ACG · NC_050903.1 · 127,800–127,873 bp · − rrn5 · NC_050903.1 · 128,117–128,237 bp · − rrn4.5 · NC_050903.1 · 128,493–128,595 bp · − rrn23 · NC_050903.1 · 128,696–131,503 bp · − trnA-UGC · NC_050903.1 · 131,669–132,552 bp · − trnI-GAU · NC_050903.1 · 132,617–133,628 bp · − rrn16 · NC_050903.1 · 133,927–135,417 bp · − trnV-GAC · NC_050903.1 · 135,644–135,715 bp · − ycf15 · NC_050903.1 · 142,029–142,277 bp · − ycf2 · NC_050903.1 · 142,368–149,201 bp · − psbK · NC_050903.1 · 7,380–7,559 bp · + psbI · NC_050903.1 · 7,955–8,065 bp · + trnG-UCC · NC_050903.1 · 9,008–9,760 bp · + trnR-UCU · NC_050903.1 · 9,942–10,013 bp · + trnC-GCA · NC_050903.1 · 27,903–27,973 bp · + petN · NC_050903.1 · 28,136–28,225 bp · + trnT-GGU · NC_050903.1 · 30,784–30,855 bp · + psbD · NC_050903.1 · 32,236–33,297 bp · + psbC · NC_050903.1 · 33,245–34,666 bp · + psbZ · NC_050903.1 · 35,340–35,528 bp · + trnG-GCC · NC_050903.1 · 35,777–35,847 bp · + trnS-GGA · NC_050903.1 · 44,693–44,779 bp · + trnL-UAA · NC_050903.1 · 46,753–47,292 bp · + trnF-GAA · NC_050903.1 · 47,591–47,663 bp · + trnM-CAU · NC_050903.1 · 51,594–51,666 bp · + rbcL · NC_050903.1 · 54,512–55,966 bp · + accD · NC_050903.1 · 56,676–58,163 bp · + psaI · NC_050903.1 · 58,626–58,736 bp · + ycf4 · NC_050903.1 · 59,198–59,752 bp · + cemA · NC_050903.1 · 60,301–60,990 bp · + petA · NC_050903.1 · 61,196–62,158 bp · + petL · NC_050903.1 · 64,795–64,890 bp · + petG · NC_050903.1 · 65,069–65,182 bp · + psaJ · NC_050903.1 · 65,866–66,039 bp · + rpl33 · NC_050903.1 · 66,491–66,691 bp · + rps18 · NC_050903.1 · 66,857–67,162 bp · + rps12 · NC_050903.1 · 137,342–138,125 bp · + psbB · NC_050903.1 · 71,173–72,699 bp · + psbT · NC_050903.1 · 72,878–72,985 bp · + psbH · NC_050903.1 · 73,265–73,504 bp · + petB · NC_050903.1 · 73,630–74,980 bp · + petD · NC_050903.1 · 75,174–76,370 bp · + ycf2 · NC_050903.1 · 84,869–91,702 bp · + ycf15 · NC_050903.1 · 91,793–92,041 bp · + trnV-GAC · NC_050903.1 · 98,355–98,426 bp · + rrn16 · NC_050903.1 · 98,653–100,143 bp · + trnI-GAU · NC_050903.1 · 100,442–101,453 bp · + trnA-UGC · NC_050903.1 · 101,518–102,401 bp · + rrn23 · NC_050903.1 · 102,567–105,374 bp · + rrn4.5 · NC_050903.1 · 105,475–105,577 bp · + rrn5 · NC_050903.1 · 105,833–105,953 bp · + trnR-ACG · NC_050903.1 · 106,197–106,270 bp · + rpl32 · NC_050903.1 · 110,882–111,052 bp · + trnL-UAG · NC_050903.1 · 111,756–111,835 bp · + ccsA · NC_050903.1 · 111,886–112,911 bp · + trnN-GUU · NC_050903.1 · 127,209–127,280 bp · + rps7 · NC_050903.1 · 138,179–138,646 bp · + ndhB · NC_050903.1 · 138,975–141,128 bp · + trnL-CAA · NC_050903.1 · 141,688–141,768 bp · + trnI-CAU · NC_050903.1 · 149,290–149,363 bp · + rpl23 · NC_050903.1 · 149,529–149,810 bp · + rpl2 · NC_050903.1 · 149,829–151,311 bp · + 0 kb 13 kb 26 kb 39 kb 52 kb 65 kb 78 kb 91 kb 104 kb 117 kb 130 kb 143 kb Salvia yunnanensis ANNOTATED PLASTOME NC_050903.1 151,413 bp · 132 genes Gene function Transfer RNA Photosystem II Other Ribosomal protein ATP synthase RNA polymerase Cytochrome Photosystem I NADH dehydrogenase Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

133 local segments
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−118474
psbAgenephotosystem-ii−39114491059
trnK-UUUgenetranslation-rna−166442632600
matKgeneother−196935311563
rps16generibosomal-protein−483159411111
trnQ-UUGgenetranslation-rna−6891696272
psbKgenephotosystem-ii+73807559180
psbIgenephotosystem-ii+79558065111
trnS-GCUgenetranslation-rna−8229831688
trnG-UCCgenetranslation-rna+90089760753
trnR-UCUgenetranslation-rna+99421001372
atpAgeneatp-synthase−10125116481524
atpFgeneatp-synthase−11736129841249
atpHgeneatp-synthase−1325713502246
atpIgeneatp-synthase−1447315216744
rps2generibosomal-protein−1544216152711
rpoC2generna-polymerase−16361205484188
rpoC1generna-polymerase−20706235192814
rpoBgenerna-polymerase−23546267583213
trnC-GCAgenetranslation-rna+279032797371
petNgenecytochrome+281362822590
psbMgenephotosystem-ii−2920229306105
trnD-GUCgenetranslation-rna−298272990074
trnY-GUAgenetranslation-rna−300113009484
trnE-UUCgenetranslation-rna−301663023873
trnT-GGUgenetranslation-rna+307843085572
psbDgenephotosystem-ii+32236332971062
psbCgenephotosystem-ii+33245346661422
trnS-UGAgenetranslation-rna−349133500593
psbZgenephotosystem-ii+3534035528189
trnG-GCCgenetranslation-rna+357773584771
trnfM-CAUgenetranslation-rna−360273610074
rps14generibosomal-protein−3624536547303
psaBgenephotosystem-i−36670388742205
psaAgenephotosystem-i−38900411522253
ycf3geneother−41935438711937
trnS-GGAgenetranslation-rna+446934477987
rps4generibosomal-protein−4505645661606
trnT-UGUgenetranslation-rna−460294610173
trnL-UAAgenetranslation-rna+4675347292540
trnF-GAAgenetranslation-rna+475914766373
ndhJgenenad-dehydrogenase−4813548629495
ndhKgenenad-dehydrogenase−4872249399678
ndhCgenenad-dehydrogenase−4944949811363
trnV-UACgenetranslation-rna−5076551413649
trnM-CAUgenetranslation-rna+515945166673
atpEgeneatp-synthase−5186252263402
atpBgeneatp-synthase−52260537561497
rbcLgeneother+54512559661455
accDgeneother+56676581631488
psaIgenephotosystem-i+5862658736111
ycf4geneother+5919859752555
cemAgeneother+6030160990690
petAgenecytochrome+6119662158963
psbJgenephotosystem-ii−6321163333123
psbLgenephotosystem-ii−6346363579117
psbFgenephotosystem-ii−6360363722120
psbEgenephotosystem-ii−6373763988252
petLgenecytochrome+647956489096
petGgenecytochrome+6506965182114
trnW-CCAgenetranslation-rna−652976537074
trnP-UGGgenetranslation-rna−655416561474
psaJgenephotosystem-i+6586666039174
rpl33generibosomal-protein+6649166691201
rps18generibosomal-protein+6685767162306
rpl20generibosomal-protein−6739667782387
rps12generibosomal-protein−6857668689114
clpPgeneother−68813707241912
psbBgenephotosystem-ii+71173726991527
psbTgenephotosystem-ii+7287872985108
psbNgenephotosystem-ii−7304673177132
psbHgenephotosystem-ii+7326573504240
petBgenecytochrome+73630749801351
petDgenecytochrome+75174763701197
rpoAgenerna-polymerase−76547775541008
rps11generibosomal-protein−7762678042417
rpl36generibosomal-protein−7815278265114
infAgeneother−7836178594234
rps8generibosomal-protein−7872179125405
rpl14generibosomal-protein−7931579683369
rpl16generibosomal-protein−79815811011287
rps3generibosomal-protein−8123781899663
rpl22generibosomal-protein−8188482351468
rps19generibosomal-protein−8242182699279
rpl2generibosomal-protein−82759842411483
rpl23generibosomal-protein−8426084541282
trnI-CAUgenetranslation-rna−847078478074
ycf2geneother+84869917026834
ycf15geneother+9179392041249
trnL-CAAgenetranslation-rna−923029238281
ndhBgenenad-dehydrogenase−92942950952154
rps7generibosomal-protein−9542495891468
rps12generibosomal-protein−9594596728784
trnV-GACgenetranslation-rna+983559842672
rrn16generibosomal-rna+986531001431491
trnI-GAUgenetranslation-rna+1004421014531012
trnA-UGCgenetranslation-rna+101518102401884
rrn23generibosomal-rna+1025671053742808
rrn4.5generibosomal-rna+105475105577103
rrn5generibosomal-rna+105833105953121
trnR-ACGgenetranslation-rna+10619710627074
trnN-GUUgenetranslation-rna−10679010686172
ndhFgenenad-dehydrogenase−1082151104492235
rpl32generibosomal-protein+110882111052171
trnL-UAGgenetranslation-rna+11175611183580
ccsAgeneother+1118861129111026
ndhDgenenad-dehydrogenase−1131411146821542
psaCgenephotosystem-i−114797115042246
ndhEgenenad-dehydrogenase−115293115598306
ndhGgenenad-dehydrogenase−115814116344531
ndhIgenenad-dehydrogenase−116727117233507
ndhAgenenad-dehydrogenase−1173141193902077
ndhHgenenad-dehydrogenase−1193921206271236
rps15generibosomal-protein−120673120945273
ycf1geneother−1213721269905619
trnN-GUUgenetranslation-rna+12720912728072
trnR-ACGgenetranslation-rna−12780012787374
rrn5generibosomal-rna−128117128237121
rrn4.5generibosomal-rna−128493128595103
rrn23generibosomal-rna−1286961315032808
trnA-UGCgenetranslation-rna−131669132552884
trnI-GAUgenetranslation-rna−1326171336281012
rrn16generibosomal-rna−1339271354171491
trnV-GACgenetranslation-rna−13564413571572
rps12generibosomal-protein+137342138125784
rps7generibosomal-protein+138179138646468
ndhBgenenad-dehydrogenase+1389751411282154
trnL-CAAgenetranslation-rna+14168814176881
ycf15geneother−142029142277249
ycf2geneother−1423681492016834
trnI-CAUgenetranslation-rna+14929014936374
rpl23generibosomal-protein+149529149810282
rpl2generibosomal-protein+1498291513111483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Chloroplast DNANC_050903.1DNA · accDNC_050903DNA · atpBNC_050903DNA · matKNC_050903DNA · ndhFNC_050903DNA · psbANC_050903DNA · rbcLNC_050903DNA · rps12NC_050903DNA · ycf1NC_050903