Coordinate-aware organelle record

Salvia yunnanensis chloroplast genome

Available NC_050903.1 151,413 bp 132 coordinate-linked features
LSCIRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-84 bp · − strandpsbA · gene · 391-1,449 bp · − strandtrnK-UUU · gene · 1,664-4,263 bp · − strandmatK · gene · 1,969-3,531 bp · − strandrps16 · gene · 4,831-5,941 bp · − strandtrnQ-UUG · gene · 6,891-6,962 bp · − strandpsbK · gene · 7,380-7,559 bp · + strandpsbI · gene · 7,955-8,065 bp · + strandtrnS-GCU · gene · 8,229-8,316 bp · − strandtrnG-UCC · gene · 9,008-9,760 bp · + strandtrnR-UCU · gene · 9,942-10,013 bp · + strandatpA · gene · 10,125-11,648 bp · − strandatpF · gene · 11,736-12,984 bp · − strandatpH · gene · 13,257-13,502 bp · − strandatpI · gene · 14,473-15,216 bp · − strandrps2 · gene · 15,442-16,152 bp · − strandrpoC2 · gene · 16,361-20,548 bp · − strandrpoC1 · gene · 20,706-23,519 bp · − strandrpoB · gene · 23,546-26,758 bp · − strandtrnC-GCA · gene · 27,903-27,973 bp · + strandpetN · gene · 28,136-28,225 bp · + strandpsbM · gene · 29,202-29,306 bp · − strandtrnD-GUC · gene · 29,827-29,900 bp · − strandtrnY-GUA · gene · 30,011-30,094 bp · − strandtrnE-UUC · gene · 30,166-30,238 bp · − strandtrnT-GGU · gene · 30,784-30,855 bp · + strandpsbD · gene · 32,236-33,297 bp · + strandpsbC · gene · 33,245-34,666 bp · + strandtrnS-UGA · gene · 34,913-35,005 bp · − strandpsbZ · gene · 35,340-35,528 bp · + strandtrnG-GCC · gene · 35,777-35,847 bp · + strandtrnfM-CAU · gene · 36,027-36,100 bp · − strandrps14 · gene · 36,245-36,547 bp · − strandpsaB · gene · 36,670-38,874 bp · − strandpsaA · gene · 38,900-41,152 bp · − strandycf3 · gene · 41,935-43,871 bp · − strandtrnS-GGA · gene · 44,693-44,779 bp · + strandrps4 · gene · 45,056-45,661 bp · − strandtrnT-UGU · gene · 46,029-46,101 bp · − strandtrnL-UAA · gene · 46,753-47,292 bp · + strandtrnF-GAA · gene · 47,591-47,663 bp · + strandndhJ · gene · 48,135-48,629 bp · − strandndhK · gene · 48,722-49,399 bp · − strandndhC · gene · 49,449-49,811 bp · − strandtrnV-UAC · gene · 50,765-51,413 bp · − strandtrnM-CAU · gene · 51,594-51,666 bp · + strandatpE · gene · 51,862-52,263 bp · − strandatpB · gene · 52,260-53,756 bp · − strandrbcL · gene · 54,512-55,966 bp · + strandaccD · gene · 56,676-58,163 bp · + strandpsaI · gene · 58,626-58,736 bp · + strandycf4 · gene · 59,198-59,752 bp · + strandcemA · gene · 60,301-60,990 bp · + strandpetA · gene · 61,196-62,158 bp · + strandpsbJ · gene · 63,211-63,333 bp · − strandpsbL · gene · 63,463-63,579 bp · − strandpsbF · gene · 63,603-63,722 bp · − strandpsbE · gene · 63,737-63,988 bp · − strandpetL · gene · 64,795-64,890 bp · + strandpetG · gene · 65,069-65,182 bp · + strandtrnW-CCA · gene · 65,297-65,370 bp · − strandtrnP-UGG · gene · 65,541-65,614 bp · − strandpsaJ · gene · 65,866-66,039 bp · + strandrpl33 · gene · 66,491-66,691 bp · + strandrps18 · gene · 66,857-67,162 bp · + strandrpl20 · gene · 67,396-67,782 bp · − strandrps12 · gene · 68,576-96,728 bp · − strandrps12 · gene · 68,576-138,125 bp · + strandclpP · gene · 68,813-70,724 bp · − strandpsbB · gene · 71,173-72,699 bp · + strandpsbT · gene · 72,878-72,985 bp · + strandpsbN · gene · 73,046-73,177 bp · − strandpsbH · gene · 73,265-73,504 bp · + strandpetB · gene · 73,630-74,980 bp · + strandpetD · gene · 75,174-76,370 bp · + strandrpoA · gene · 76,547-77,554 bp · − strandrps11 · gene · 77,626-78,042 bp · − strandrpl36 · gene · 78,152-78,265 bp · − strandinfA · gene · 78,361-78,594 bp · − strandrps8 · gene · 78,721-79,125 bp · − strandrpl14 · gene · 79,315-79,683 bp · − strandrpl16 · gene · 79,815-81,101 bp · − strandrps3 · gene · 81,237-81,899 bp · − strandrpl22 · gene · 81,884-82,351 bp · − strandrps19 · gene · 82,421-82,699 bp · − strandrpl2 · gene · 82,759-84,241 bp · − strandrpl23 · gene · 84,260-84,541 bp · − strandtrnI-CAU · gene · 84,707-84,780 bp · − strandycf2 · gene · 84,869-91,702 bp · + strandycf15 · gene · 91,793-92,041 bp · + strandtrnL-CAA · gene · 92,302-92,382 bp · − strandndhB · gene · 92,942-95,095 bp · − strandrps7 · gene · 95,424-95,891 bp · − strandtrnV-GAC · gene · 98,355-98,426 bp · + strandrrn16 · gene · 98,653-100,143 bp · + strandtrnI-GAU · gene · 100,442-101,453 bp · + strandtrnA-UGC · gene · 101,518-102,401 bp · + strandrrn23 · gene · 102,567-105,374 bp · + strandrrn4.5 · gene · 105,475-105,577 bp · + strandrrn5 · gene · 105,833-105,953 bp · + strandtrnR-ACG · gene · 106,197-106,270 bp · + strandtrnN-GUU · gene · 106,790-106,861 bp · − strandndhF · gene · 108,215-110,449 bp · − strandrpl32 · gene · 110,882-111,052 bp · + strandtrnL-UAG · gene · 111,756-111,835 bp · + strandccsA · gene · 111,886-112,911 bp · + strandndhD · gene · 113,141-114,682 bp · − strandpsaC · gene · 114,797-115,042 bp · − strandndhE · gene · 115,293-115,598 bp · − strandndhG · gene · 115,814-116,344 bp · − strandndhI · gene · 116,727-117,233 bp · − strandndhA · gene · 117,314-119,390 bp · − strandndhH · gene · 119,392-120,627 bp · − strandrps15 · gene · 120,673-120,945 bp · − strandycf1 · gene · 121,372-126,990 bp · − strandtrnN-GUU · gene · 127,209-127,280 bp · + strandtrnR-ACG · gene · 127,800-127,873 bp · − strandrrn5 · gene · 128,117-128,237 bp · − strandrrn4.5 · gene · 128,493-128,595 bp · − strandrrn23 · gene · 128,696-131,503 bp · − strandtrnA-UGC · gene · 131,669-132,552 bp · − strandtrnI-GAU · gene · 132,617-133,628 bp · − strandrrn16 · gene · 133,927-135,417 bp · − strandtrnV-GAC · gene · 135,644-135,715 bp · − strandrps7 · gene · 138,179-138,646 bp · + strandndhB · gene · 138,975-141,128 bp · + strandtrnL-CAA · gene · 141,688-141,768 bp · + strandycf15 · gene · 142,029-142,277 bp · − strandycf2 · gene · 142,368-149,201 bp · − strandtrnI-CAU · gene · 149,290-149,363 bp · + strandrpl23 · gene · 149,529-149,810 bp · + strandrpl2 · gene · 149,829-151,311 bp · + strandSalvia yunnanensisANNOTATED PLASTOMENC_050903.1151,413 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_050903.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108474
psbAgenephotosystem-ii−39014491059
trnK-UUUgenetranslation-rna−166342632600
matKgeneother−196835311563
rps16generibosomal-protein−483059411111
trnQ-UUGgenetranslation-rna−6890696272
psbKgenephotosystem-ii+73797559180
psbIgenephotosystem-ii+79548065111
trnS-GCUgenetranslation-rna−8228831688
trnG-UCCgenetranslation-rna+90079760753
trnR-UCUgenetranslation-rna+99411001372
atpAgeneatp-synthase−10124116481524
atpFgeneatp-synthase−11735129841249
atpHgeneatp-synthase−1325613502246
atpIgeneatp-synthase−1447215216744
rps2generibosomal-protein−1544116152711
rpoC2generna-polymerase−16360205484188
rpoC1generna-polymerase−20705235192814
rpoBgenerna-polymerase−23545267583213
trnC-GCAgenetranslation-rna+279022797371
petNgenecytochrome+281352822590
psbMgenephotosystem-ii−2920129306105
trnD-GUCgenetranslation-rna−298262990074
trnY-GUAgenetranslation-rna−300103009484
trnE-UUCgenetranslation-rna−301653023873
trnT-GGUgenetranslation-rna+307833085572
psbDgenephotosystem-ii+32235332971062
psbCgenephotosystem-ii+33244346661422
trnS-UGAgenetranslation-rna−349123500593
psbZgenephotosystem-ii+3533935528189
trnG-GCCgenetranslation-rna+357763584771
trnfM-CAUgenetranslation-rna−360263610074
rps14generibosomal-protein−3624436547303
psaBgenephotosystem-i−36669388742205
psaAgenephotosystem-i−38899411522253
ycf3geneother−41934438711937
trnS-GGAgenetranslation-rna+446924477987
rps4generibosomal-protein−4505545661606
trnT-UGUgenetranslation-rna−460284610173
trnL-UAAgenetranslation-rna+4675247292540
trnF-GAAgenetranslation-rna+475904766373
ndhJgenenad-dehydrogenase−4813448629495
ndhKgenenad-dehydrogenase−4872149399678
ndhCgenenad-dehydrogenase−4944849811363
trnV-UACgenetranslation-rna−5076451413649
trnM-CAUgenetranslation-rna+515935166673
atpEgeneatp-synthase−5186152263402
atpBgeneatp-synthase−52259537561497
rbcLgeneother+54511559661455
accDgeneother+56675581631488
psaIgenephotosystem-i+5862558736111
ycf4geneother+5919759752555
cemAgeneother+6030060990690
petAgenecytochrome+6119562158963
psbJgenephotosystem-ii−6321063333123
psbLgenephotosystem-ii−6346263579117
psbFgenephotosystem-ii−6360263722120
psbEgenephotosystem-ii−6373663988252
petLgenecytochrome+647946489096
petGgenecytochrome+6506865182114
trnW-CCAgenetranslation-rna−652966537074
trnP-UGGgenetranslation-rna−655406561474
psaJgenephotosystem-i+6586566039174
rpl33generibosomal-protein+6649066691201
rps18generibosomal-protein+6685667162306
rpl20generibosomal-protein−6739567782387
rps12generibosomal-protein−685759672828153
rps12generibosomal-protein+6857513812569550
clpPgeneother−68812707241912
psbBgenephotosystem-ii+71172726991527
psbTgenephotosystem-ii+7287772985108
psbNgenephotosystem-ii−7304573177132
psbHgenephotosystem-ii+7326473504240
petBgenecytochrome+73629749801351
petDgenecytochrome+75173763701197
rpoAgenerna-polymerase−76546775541008
rps11generibosomal-protein−7762578042417
rpl36generibosomal-protein−7815178265114
infAgeneother−7836078594234
rps8generibosomal-protein−7872079125405
rpl14generibosomal-protein−7931479683369
rpl16generibosomal-protein−79814811011287
rps3generibosomal-protein−8123681899663
rpl22generibosomal-protein−8188382351468
rps19generibosomal-protein−8242082699279
rpl2generibosomal-protein−82758842411483
rpl23generibosomal-protein−8425984541282
trnI-CAUgenetranslation-rna−847068478074
ycf2geneother+84868917026834
ycf15geneother+9179292041249
trnL-CAAgenetranslation-rna−923019238281
ndhBgenenad-dehydrogenase−92941950952154
rps7generibosomal-protein−9542395891468
trnV-GACgenetranslation-rna+983549842672
rrn16generibosomal-rna+986521001431491
trnI-GAUgenetranslation-rna+1004411014531012
trnA-UGCgenetranslation-rna+101517102401884
rrn23generibosomal-rna+1025661053742808
rrn4.5generibosomal-rna+105474105577103
rrn5generibosomal-rna+105832105953121
trnR-ACGgenetranslation-rna+10619610627074
trnN-GUUgenetranslation-rna−10678910686172
ndhFgenenad-dehydrogenase−1082141104492235
rpl32generibosomal-protein+110881111052171
trnL-UAGgenetranslation-rna+11175511183580
ccsAgeneother+1118851129111026
ndhDgenenad-dehydrogenase−1131401146821542
psaCgenephotosystem-i−114796115042246
ndhEgenenad-dehydrogenase−115292115598306
ndhGgenenad-dehydrogenase−115813116344531
ndhIgenenad-dehydrogenase−116726117233507
ndhAgenenad-dehydrogenase−1173131193902077
ndhHgenenad-dehydrogenase−1193911206271236
rps15generibosomal-protein−120672120945273
ycf1geneother−1213711269905619
trnN-GUUgenetranslation-rna+12720812728072
trnR-ACGgenetranslation-rna−12779912787374
rrn5generibosomal-rna−128116128237121
rrn4.5generibosomal-rna−128492128595103
rrn23generibosomal-rna−1286951315032808
trnA-UGCgenetranslation-rna−131668132552884
trnI-GAUgenetranslation-rna−1326161336281012
rrn16generibosomal-rna−1339261354171491
trnV-GACgenetranslation-rna−13564313571572
rps7generibosomal-protein+138178138646468
ndhBgenenad-dehydrogenase+1389741411282154
trnL-CAAgenetranslation-rna+14168714176881
ycf15geneother−142028142277249
ycf2geneother−1423671492016834
trnI-CAUgenetranslation-rna+14928914936374
rpl23generibosomal-protein+149528149810282
rpl2generibosomal-protein+1498281513111483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources