Schnabelia terniflora chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_065394.1 · 2–74 bp · −
psbA · NC_065394.1 · 395–1,453 bp · −
trnK-UUU · NC_065394.1 · 1,698–4,320 bp · −
matK · NC_065394.1 · 2,051–3,586 bp · −
rps16 · NC_065394.1 · 5,271–6,485 bp · −
trnQ-UUG · NC_065394.1 · 7,642–7,713 bp · −
trnS-GCU · NC_065394.1 · 8,852–8,939 bp · −
atpA · NC_065394.1 · 10,783–12,306 bp · −
atpF · NC_065394.1 · 12,415–13,667 bp · −
atpH · NC_065394.1 · 14,046–14,291 bp · −
atpI · NC_065394.1 · 15,243–15,986 bp · −
rps2 · NC_065394.1 · 16,212–16,922 bp · −
rpoC2 · NC_065394.1 · 17,173–21,312 bp · −
rpoC1 · NC_065394.1 · 21,473–24,314 bp · −
rpoB · NC_065394.1 · 24,341–27,553 bp · −
psbM · NC_065394.1 · 30,591–30,695 bp · −
trnD-GUC · NC_065394.1 · 31,210–31,283 bp · −
trnY-GUA · NC_065394.1 · 31,393–31,476 bp · −
trnE-UUC · NC_065394.1 · 31,549–31,621 bp · −
trnS-UGA · NC_065394.1 · 36,250–36,342 bp · −
trnfM-CAU · NC_065394.1 · 37,343–37,416 bp · −
rps14 · NC_065394.1 · 37,562–37,864 bp · −
psaB · NC_065394.1 · 37,980–40,184 bp · −
psaA · NC_065394.1 · 40,210–42,462 bp · −
ycf3 · NC_065394.1 · 43,199–45,148 bp · −
rps4 · NC_065394.1 · 46,134–46,739 bp · −
trnT-UGU · NC_065394.1 · 47,095–47,167 bp · −
ndhJ · NC_065394.1 · 49,524–50,000 bp · −
ndhK · NC_065394.1 · 50,115–50,876 bp · −
ndhC · NC_065394.1 · 50,846–51,208 bp · −
trnV-UAC · NC_065394.1 · 51,840–52,511 bp · −
atpE · NC_065394.1 · 52,964–53,365 bp · −
atpB · NC_065394.1 · 53,362–54,858 bp · −
psbJ · NC_065394.1 · 64,044–64,166 bp · −
psbL · NC_065394.1 · 64,308–64,424 bp · −
psbF · NC_065394.1 · 64,448–64,567 bp · −
psbE · NC_065394.1 · 64,582–64,833 bp · −
trnW-CCA · NC_065394.1 · 66,266–66,339 bp · −
trnP-UGG · NC_065394.1 · 66,511–66,584 bp · −
rpl20 · NC_065394.1 · 68,410–68,796 bp · −
rps12 · NC_065394.1 · 69,618–69,731 bp · −
rps12 · NC_065394.1 · 95,716–96,512 bp · −
clpP · NC_065394.1 · 69,863–71,831 bp · −
psbN · NC_065394.1 · 74,149–74,280 bp · −
rpoA · NC_065394.1 · 77,663–78,715 bp · −
rps11 · NC_065394.1 · 78,787–79,224 bp · −
rpl36 · NC_065394.1 · 79,311–79,424 bp · −
infA · NC_065394.1 · 79,529–79,762 bp · −
rps8 · NC_065394.1 · 79,884–80,294 bp · −
rpl14 · NC_065394.1 · 80,470–80,838 bp · −
rpl16 · NC_065394.1 · 80,965–82,170 bp · −
rps3 · NC_065394.1 · 82,360–83,010 bp · −
rpl22 · NC_065394.1 · 82,995–83,468 bp · −
rps19 · NC_065394.1 · 83,528–83,677 bp · −
rpl2 · NC_065394.1 · 83,868–85,368 bp · −
rpl23 · NC_065394.1 · 85,387–85,668 bp · −
trnI-CAU · NC_065394.1 · 85,834–85,907 bp · −
trnL-CAA · NC_065394.1 · 92,085–92,165 bp · −
ndhB · NC_065394.1 · 92,710–94,867 bp · −
rps7 · NC_065394.1 · 95,195–95,662 bp · −
trnN-GUU · NC_065394.1 · 106,580–106,651 bp · −
ndhF · NC_065394.1 · 115,289–117,526 bp · −
ndhD · NC_065394.1 · 120,045–121,355 bp · −
psaC · NC_065394.1 · 121,655–121,900 bp · −
ndhE · NC_065394.1 · 122,152–122,454 bp · −
ndhG · NC_065394.1 · 122,628–123,158 bp · −
ndhI · NC_065394.1 · 123,485–123,991 bp · −
ndhA · NC_065394.1 · 124,079–126,189 bp · −
ndhH · NC_065394.1 · 126,191–127,372 bp · −
rps15 · NC_065394.1 · 127,469–127,741 bp · −
ycf1 · NC_065394.1 · 128,149–133,380 bp · −
trnR-ACG · NC_065394.1 · 134,578–134,651 bp · −
rrn5 · NC_065394.1 · 134,902–135,022 bp · −
rrn4.5 · NC_065394.1 · 135,252–135,354 bp · −
rrn23 · NC_065394.1 · 135,455–138,271 bp · −
trnA-UGC · NC_065394.1 · 138,433–139,315 bp · −
trnI-GAU · NC_065394.1 · 139,380–140,401 bp · −
ycf68 · NC_065394.1 · 139,953–140,246 bp · −
rrn16 · NC_065394.1 · 140,700–142,190 bp · −
trnV-GAC · NC_065394.1 · 142,420–142,491 bp · −
ycf15 · NC_065394.1 · 148,844–148,951 bp · −
ycf2 · NC_065394.1 · 149,012–154,426 bp · −
psbK · NC_065394.1 · 8,061–8,252 bp · +
psbI · NC_065394.1 · 8,648–8,758 bp · +
trnG-UCC · NC_065394.1 · 9,626–10,402 bp · +
trnR-UCU · NC_065394.1 · 10,606–10,677 bp · +
trnC-GCA · NC_065394.1 · 28,728–28,798 bp · +
petN · NC_065394.1 · 29,534–29,623 bp · +
trnT-GGU · NC_065394.1 · 32,179–32,250 bp · +
psbD · NC_065394.1 · 33,576–34,637 bp · +
psbC · NC_065394.1 · 34,783–36,006 bp · +
psbZ · NC_065394.1 · 36,666–36,854 bp · +
trnG-GCC · NC_065394.1 · 37,124–37,194 bp · +
trnS-GGA · NC_065394.1 · 45,745–45,831 bp · +
trnL-UAA · NC_065394.1 · 47,902–48,462 bp · +
trnF-GAA · NC_065394.1 · 48,769–48,841 bp · +
trnM-CAU · NC_065394.1 · 52,692–52,764 bp · +
rbcL · NC_065394.1 · 55,626–57,089 bp · +
accD · NC_065394.1 · 57,765–59,126 bp · +
psaI · NC_065394.1 · 59,529–59,639 bp · +
ycf4 · NC_065394.1 · 60,059–60,613 bp · +
cemA · NC_065394.1 · 61,233–61,922 bp · +
petA · NC_065394.1 · 62,128–63,090 bp · +
petL · NC_065394.1 · 65,748–65,843 bp · +
petG · NC_065394.1 · 66,017–66,130 bp · +
psaJ · NC_065394.1 · 66,868–67,002 bp · +
rpl33 · NC_065394.1 · 67,481–67,681 bp · +
rps18 · NC_065394.1 · 67,857–68,162 bp · +
rps12 · NC_065394.1 · 144,104–144,900 bp · +
psbB · NC_065394.1 · 72,279–73,805 bp · +
psbT · NC_065394.1 · 73,981–74,088 bp · +
psbH · NC_065394.1 · 74,386–74,598 bp · +
petB · NC_065394.1 · 74,720–76,113 bp · +
petD · NC_065394.1 · 76,302–77,508 bp · +
ycf2 · NC_065394.1 · 86,190–91,604 bp · +
ycf15 · NC_065394.1 · 91,665–91,772 bp · +
trnV-GAC · NC_065394.1 · 98,125–98,196 bp · +
rrn16 · NC_065394.1 · 98,426–99,916 bp · +
trnI-GAU · NC_065394.1 · 100,215–101,236 bp · +
trnA-UGC · NC_065394.1 · 101,301–102,183 bp · +
rrn23 · NC_065394.1 · 102,345–105,161 bp · +
rrn4.5 · NC_065394.1 · 105,262–105,364 bp · +
rrn5 · NC_065394.1 · 105,594–105,714 bp · +
trnR-ACG · NC_065394.1 · 105,965–106,038 bp · +
ycf1 · NC_065394.1 · 107,236–112,467 bp · +
rps15 · NC_065394.1 · 112,875–113,147 bp · +
ndhH · NC_065394.1 · 113,244–114,425 bp · +
rpl32 · NC_065394.1 · 118,045–118,203 bp · +
trnL-UAG · NC_065394.1 · 118,672–118,751 bp · +
ccsA · NC_065394.1 · 118,847–119,827 bp · +
trnN-GUU · NC_065394.1 · 133,965–134,036 bp · +
rps7 · NC_065394.1 · 144,954–145,421 bp · +
ndhB · NC_065394.1 · 145,749–147,906 bp · +
trnL-CAA · NC_065394.1 · 148,451–148,531 bp · +
trnI-CAU · NC_065394.1 · 154,709–154,782 bp · +
rpl23 · NC_065394.1 · 154,948–155,229 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Schnabelia terniflora
ANNOTATED PLASTOME
NC_065394.1
156,672 bp · 135 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 39168 78336 117504 156672 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rps15 ndhH rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
136 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 74 73 Locate
psbA gene − 395 1453 1059 Locate
trnK-UUU gene − 1698 4320 2623 Locate
matK gene − 2051 3586 1536 Locate
rps16 gene − 5271 6485 1215 Locate
trnQ-UUG gene − 7642 7713 72 Locate
psbK gene + 8061 8252 192 Locate
psbI gene + 8648 8758 111 Locate
trnS-GCU gene − 8852 8939 88 Locate
trnG-UCC gene + 9626 10402 777 Locate
trnR-UCU gene + 10606 10677 72 Locate
atpA gene − 10783 12306 1524 Locate
atpF gene − 12415 13667 1253 Locate
atpH gene − 14046 14291 246 Locate
atpI gene − 15243 15986 744 Locate
rps2 gene − 16212 16922 711 Locate
rpoC2 gene − 17173 21312 4140 Locate
rpoC1 gene − 21473 24314 2842 Locate
rpoB gene − 24341 27553 3213 Locate
trnC-GCA gene + 28728 28798 71 Locate
petN gene + 29534 29623 90 Locate
psbM gene − 30591 30695 105 Locate
trnD-GUC gene − 31210 31283 74 Locate
trnY-GUA gene − 31393 31476 84 Locate
trnE-UUC gene − 31549 31621 73 Locate
trnT-GGU gene + 32179 32250 72 Locate
psbD gene + 33576 34637 1062 Locate
psbC gene + 34783 36006 1224 Locate
trnS-UGA gene − 36250 36342 93 Locate
psbZ gene + 36666 36854 189 Locate
trnG-GCC gene + 37124 37194 71 Locate
trnfM-CAU gene − 37343 37416 74 Locate
rps14 gene − 37562 37864 303 Locate
psaB gene − 37980 40184 2205 Locate
psaA gene − 40210 42462 2253 Locate
ycf3 gene − 43199 45148 1950 Locate
trnS-GGA gene + 45745 45831 87 Locate
rps4 gene − 46134 46739 606 Locate
trnT-UGU gene − 47095 47167 73 Locate
trnL-UAA gene + 47902 48462 561 Locate
trnF-GAA gene + 48769 48841 73 Locate
ndhJ gene − 49524 50000 477 Locate
ndhK gene − 50115 50876 762 Locate
ndhC gene − 50846 51208 363 Locate
trnV-UAC gene − 51840 52511 672 Locate
trnM-CAU gene + 52692 52764 73 Locate
atpE gene − 52964 53365 402 Locate
atpB gene − 53362 54858 1497 Locate
rbcL gene + 55626 57089 1464 Locate
accD gene + 57765 59126 1362 Locate
psaI gene + 59529 59639 111 Locate
ycf4 gene + 60059 60613 555 Locate
cemA gene + 61233 61922 690 Locate
petA gene + 62128 63090 963 Locate
psbJ gene − 64044 64166 123 Locate
psbL gene − 64308 64424 117 Locate
psbF gene − 64448 64567 120 Locate
psbE gene − 64582 64833 252 Locate
petL gene + 65748 65843 96 Locate
petG gene + 66017 66130 114 Locate
trnW-CCA gene − 66266 66339 74 Locate
trnP-UGG gene − 66511 66584 74 Locate
psaJ gene + 66868 67002 135 Locate
rpl33 gene + 67481 67681 201 Locate
rps18 gene + 67857 68162 306 Locate
rpl20 gene − 68410 68796 387 Locate
rps12 gene − 69618 69731 114 Locate
clpP gene − 69863 71831 1969 Locate
psbB gene + 72279 73805 1527 Locate
psbT gene + 73981 74088 108 Locate
psbN gene − 74149 74280 132 Locate
psbH gene + 74386 74598 213 Locate
petB gene + 74720 76113 1394 Locate
petD gene + 76302 77508 1207 Locate
rpoA gene − 77663 78715 1053 Locate
rps11 gene − 78787 79224 438 Locate
rpl36 gene − 79311 79424 114 Locate
infA gene − 79529 79762 234 Locate
rps8 gene − 79884 80294 411 Locate
rpl14 gene − 80470 80838 369 Locate
rpl16 gene − 80965 82170 1206 Locate
rps3 gene − 82360 83010 651 Locate
rpl22 gene − 82995 83468 474 Locate
rps19 gene − 83528 83677 150 Locate
rpl2 gene − 83868 85368 1501 Locate
rpl23 gene − 85387 85668 282 Locate
trnI-CAU gene − 85834 85907 74 Locate
ycf2 gene + 86190 91604 5415 Locate
ycf15 gene + 91665 91772 108 Locate
trnL-CAA gene − 92085 92165 81 Locate
ndhB gene − 92710 94867 2158 Locate
rps7 gene − 95195 95662 468 Locate
rps12 gene − 95716 96512 797 Locate
trnV-GAC gene + 98125 98196 72 Locate
rrn16 gene + 98426 99916 1491 Locate
trnI-GAU gene + 100215 101236 1022 Locate
trnA-UGC gene + 101301 102183 883 Locate
rrn23 gene + 102345 105161 2817 Locate
rrn4.5 gene + 105262 105364 103 Locate
rrn5 gene + 105594 105714 121 Locate
trnR-ACG gene + 105965 106038 74 Locate
trnN-GUU gene − 106580 106651 72 Locate
ycf1 gene + 107236 112467 5232 Locate
rps15 gene + 112875 113147 273 Locate
ndhH gene + 113244 114425 1182 Locate
ndhF gene − 115289 117526 2238 Locate
rpl32 gene + 118045 118203 159 Locate
trnL-UAG gene + 118672 118751 80 Locate
ccsA gene + 118847 119827 981 Locate
ndhD gene − 120045 121355 1311 Locate
psaC gene − 121655 121900 246 Locate
ndhE gene − 122152 122454 303 Locate
ndhG gene − 122628 123158 531 Locate
ndhI gene − 123485 123991 507 Locate
ndhA gene − 124079 126189 2111 Locate
ndhH gene − 126191 127372 1182 Locate
rps15 gene − 127469 127741 273 Locate
ycf1 gene − 128149 133380 5232 Locate
trnN-GUU gene + 133965 134036 72 Locate
trnR-ACG gene − 134578 134651 74 Locate
rrn5 gene − 134902 135022 121 Locate
rrn4.5 gene − 135252 135354 103 Locate
rrn23 gene − 135455 138271 2817 Locate
trnA-UGC gene − 138433 139315 883 Locate
trnI-GAU gene − 139380 140401 1022 Locate
ycf68 gene − 139953 140246 294 Locate
rrn16 gene − 140700 142190 1491 Locate
trnV-GAC gene − 142420 142491 72 Locate
rps12 gene + 144104 144900 797 Locate
rps7 gene + 144954 145421 468 Locate
ndhB gene + 145749 147906 2158 Locate
trnL-CAA gene + 148451 148531 81 Locate
ycf15 gene − 148844 148951 108 Locate
ycf2 gene − 149012 154426 5415 Locate
trnI-CAU gene + 154709 154782 74 Locate
rpl23 gene + 154948 155229 282 Locate
Status Available
Accession NC_065394.1
Length 156,672 bp
GC content 37.8%
Annotated genes 135
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 13 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources