Schnabelia tetrodonta chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067499.1 · 4–79 bp · −
psbA · NC_067499.1 · 390–1,466 bp · −
trnK-UUU · NC_067499.1 · 1,752–4,282 bp · −
matK · NC_067499.1 · 2,023–3,558 bp · −
rps16 · NC_067499.1 · 5,248–6,524 bp · −
trnQ-UUG · NC_067499.1 · 7,607–7,678 bp · −
trnS-GCU · NC_067499.1 · 8,813–8,900 bp · −
atpA · NC_067499.1 · 10,797–12,320 bp · −
atpF · NC_067499.1 · 12,431–13,686 bp · −
atpH · NC_067499.1 · 14,056–14,301 bp · −
atpI · NC_067499.1 · 15,257–16,000 bp · −
rps2 · NC_067499.1 · 16,224–16,898 bp · −
rpoC2 · NC_067499.1 · 17,195–21,343 bp · −
rpoC1 · NC_067499.1 · 21,504–24,361 bp · −
rpoB · NC_067499.1 · 24,367–27,597 bp · −
psbM · NC_067499.1 · 30,454–30,558 bp · −
trnD-GUC · NC_067499.1 · 31,078–31,151 bp · −
trnY-GUA · NC_067499.1 · 31,261–31,344 bp · −
trnE-UUC · NC_067499.1 · 31,404–31,476 bp · −
trnS-UGA · NC_067499.1 · 36,012–36,103 bp · −
trnfM-CAU · NC_067499.1 · 37,128–37,201 bp · −
rps14 · NC_067499.1 · 37,346–37,648 bp · −
psaB · NC_067499.1 · 37,755–39,959 bp · −
psaA · NC_067499.1 · 39,985–42,237 bp · −
ycf3 · NC_067499.1 · 42,961–44,905 bp · −
rps4 · NC_067499.1 · 45,932–46,537 bp · −
trnT-UGU · NC_067499.1 · 46,896–46,968 bp · −
ndhJ · NC_067499.1 · 49,299–49,775 bp · −
ndhK · NC_067499.1 · 49,890–50,567 bp · −
ndhC · NC_067499.1 · 50,621–50,983 bp · −
trnV-UAC · NC_067499.1 · 51,612–52,283 bp · −
atpE · NC_067499.1 · 52,736–53,137 bp · −
atpB · NC_067499.1 · 53,134–54,705 bp · −
psbJ · NC_067499.1 · 63,822–63,944 bp · −
psbL · NC_067499.1 · 64,086–64,202 bp · −
psbF · NC_067499.1 · 64,226–64,345 bp · −
psbE · NC_067499.1 · 64,360–64,611 bp · −
trnW-CCA · NC_067499.1 · 66,044–66,117 bp · −
trnP-UGG · NC_067499.1 · 66,275–66,348 bp · −
trnP-GGG · NC_067499.1 · 66,277–66,347 bp · −
rpl20 · NC_067499.1 · 68,216–68,611 bp · −
rps12 · NC_067499.1 · 69,449–69,562 bp · −
rps12 · NC_067499.1 · 95,580–96,376 bp · −
clpP · NC_067499.1 · 69,694–71,658 bp · −
psbN · NC_067499.1 · 73,991–74,122 bp · −
rpoA · NC_067499.1 · 77,504–78,556 bp · −
rps11 · NC_067499.1 · 78,628–79,044 bp · −
rpl36 · NC_067499.1 · 79,146–79,259 bp · −
infA · NC_067499.1 · 79,363–79,596 bp · −
rps8 · NC_067499.1 · 79,718–80,128 bp · −
rpl14 · NC_067499.1 · 80,309–80,677 bp · −
rpl16 · NC_067499.1 · 80,804–82,020 bp · −
rps3 · NC_067499.1 · 82,188–82,838 bp · −
rpl22 · NC_067499.1 · 82,823–83,296 bp · −
rps19 · NC_067499.1 · 83,356–83,634 bp · −
rpl2 · NC_067499.1 · 83,694–85,195 bp · −
rpl23 · NC_067499.1 · 85,214–85,495 bp · −
trnI-CAU · NC_067499.1 · 85,661–85,734 bp · −
trnL-CAA · NC_067499.1 · 91,936–92,016 bp · −
ndhB · NC_067499.1 · 92,579–94,790 bp · −
rps7 · NC_067499.1 · 95,059–95,526 bp · −
trnN-GUU · NC_067499.1 · 106,502–106,574 bp · −
ndhF · NC_067499.1 · 115,229–117,466 bp · −
ndhD · NC_067499.1 · 119,981–121,516 bp · −
psaC · NC_067499.1 · 121,593–121,838 bp · −
ndhE · NC_067499.1 · 122,096–122,401 bp · −
ndhG · NC_067499.1 · 122,572–123,102 bp · −
ndhI · NC_067499.1 · 123,428–123,934 bp · −
ndhA · NC_067499.1 · 124,015–126,136 bp · −
ndhH · NC_067499.1 · 126,138–127,319 bp · −
rps15 · NC_067499.1 · 127,416–127,688 bp · −
ycf1 · NC_067499.1 · 128,095–133,326 bp · −
trnR-ACG · NC_067499.1 · 134,545–134,618 bp · −
rrn5 · NC_067499.1 · 134,854–134,974 bp · −
rrn4.5 · NC_067499.1 · 135,235–135,337 bp · −
rrn23 · NC_067499.1 · 135,436–138,245 bp · −
trnA-UGC · NC_067499.1 · 138,416–139,299 bp · −
trnI-GAU · NC_067499.1 · 139,364–140,383 bp · −
rrn16 · NC_067499.1 · 140,682–142,168 bp · −
trnV-GAC · NC_067499.1 · 142,402–142,473 bp · −
ycf15 · NC_067499.1 · 148,827–148,973 bp · −
ycf2 · NC_067499.1 · 149,038–154,428 bp · −
psbK · NC_067499.1 · 8,026–8,217 bp · +
psbI · NC_067499.1 · 8,609–8,719 bp · +
trnR-UCU · NC_067499.1 · 10,598–10,669 bp · +
trnC-GCA · NC_067499.1 · 28,772–28,852 bp · +
petN · NC_067499.1 · 29,566–29,661 bp · +
trnT-GGU · NC_067499.1 · 32,031–32,102 bp · +
trnM-CAU · NC_067499.1 · 32,037–32,095 bp · +
psbD · NC_067499.1 · 33,322–34,383 bp · +
psbC · NC_067499.1 · 34,301–35,752 bp · +
psbZ · NC_067499.1 · 36,424–36,612 bp · +
trnG-UCC · NC_067499.1 · 36,880–36,950 bp · +
trnS-GGA · NC_067499.1 · 45,524–45,610 bp · +
trnL-UAA · NC_067499.1 · 47,685–48,237 bp · +
trnF-GAA · NC_067499.1 · 48,549–48,621 bp · +
trnM-CAU · NC_067499.1 · 52,464–52,536 bp · +
trnT-GGU · NC_067499.1 · 52,470–52,528 bp · +
rbcL · NC_067499.1 · 55,422–56,885 bp · +
accD · NC_067499.1 · 57,562–58,899 bp · +
psaI · NC_067499.1 · 59,302–59,412 bp · +
ycf4 · NC_067499.1 · 59,825–60,379 bp · +
cemA · NC_067499.1 · 61,009–61,698 bp · +
petA · NC_067499.1 · 61,897–62,859 bp · +
petL · NC_067499.1 · 65,526–65,621 bp · +
petG · NC_067499.1 · 65,795–65,908 bp · +
psaJ · NC_067499.1 · 66,642–66,776 bp · +
rpl33 · NC_067499.1 · 67,289–67,489 bp · +
rps18 · NC_067499.1 · 67,673–67,984 bp · +
rps12 · NC_067499.1 · 144,117–144,913 bp · +
psbB · NC_067499.1 · 72,114–73,640 bp · +
psbT · NC_067499.1 · 73,807–73,923 bp · +
psbH · NC_067499.1 · 74,210–74,440 bp · +
petB · NC_067499.1 · 74,561–75,930 bp · +
petD · NC_067499.1 · 76,126–77,359 bp · +
ycf2 · NC_067499.1 · 86,065–91,455 bp · +
ycf15 · NC_067499.1 · 91,520–91,666 bp · +
trnV-GAC · NC_067499.1 · 98,020–98,091 bp · +
rrn16 · NC_067499.1 · 98,321–99,807 bp · +
trnI-GAU · NC_067499.1 · 100,110–101,129 bp · +
trnA-UGC · NC_067499.1 · 101,194–102,077 bp · +
rrn23 · NC_067499.1 · 102,239–105,048 bp · +
rrn4.5 · NC_067499.1 · 105,156–105,258 bp · +
rrn5 · NC_067499.1 · 105,519–105,639 bp · +
trnR-ACG · NC_067499.1 · 105,875–105,948 bp · +
ycf1 · NC_067499.1 · 107,167–112,398 bp · +
rpl32 · NC_067499.1 · 117,986–118,144 bp · +
trnL-UAG · NC_067499.1 · 118,608–118,687 bp · +
ccsA · NC_067499.1 · 118,771–119,751 bp · +
trnN-GUU · NC_067499.1 · 133,919–133,991 bp · +
rps7 · NC_067499.1 · 144,967–145,434 bp · +
ndhB · NC_067499.1 · 145,703–147,914 bp · +
trnL-CAA · NC_067499.1 · 148,477–148,557 bp · +
trnI-CAU · NC_067499.1 · 154,759–154,832 bp · +
rpl23 · NC_067499.1 · 154,998–155,279 bp · +
rpl2 · NC_067499.1 · 155,298–156,799 bp · +
rps19 · NC_067499.1 · 156,859–156,919 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Schnabelia tetrodonta
ANNOTATED PLASTOME
NC_067499.1
156,931 bp · 136 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 39233 78466 117698 156931 bp
Forward strand 5′ → 3′
psbK psbI trnR-UCU trnC-GCA petN trnT-GGU trnM-CAU psbD psbC psbZ trnG-UCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU trnT-GGU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG trnP-GGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
137 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 79 76 Locate
psbA gene − 390 1466 1077 Locate
trnK-UUU gene − 1752 4282 2531 Locate
matK gene − 2023 3558 1536 Locate
rps16 gene − 5248 6524 1277 Locate
trnQ-UUG gene − 7607 7678 72 Locate
psbK gene + 8026 8217 192 Locate
psbI gene + 8609 8719 111 Locate
trnS-GCU gene − 8813 8900 88 Locate
trnR-UCU gene + 10598 10669 72 Locate
atpA gene − 10797 12320 1524 Locate
atpF gene − 12431 13686 1256 Locate
atpH gene − 14056 14301 246 Locate
atpI gene − 15257 16000 744 Locate
rps2 gene − 16224 16898 675 Locate
rpoC2 gene − 17195 21343 4149 Locate
rpoC1 gene − 21504 24361 2858 Locate
rpoB gene − 24367 27597 3231 Locate
trnC-GCA gene + 28772 28852 81 Locate
petN gene + 29566 29661 96 Locate
psbM gene − 30454 30558 105 Locate
trnD-GUC gene − 31078 31151 74 Locate
trnY-GUA gene − 31261 31344 84 Locate
trnE-UUC gene − 31404 31476 73 Locate
trnT-GGU gene + 32031 32102 72 Locate
trnM-CAU gene + 32037 32095 59 Locate
psbD gene + 33322 34383 1062 Locate
psbC gene + 34301 35752 1452 Locate
trnS-UGA gene − 36012 36103 92 Locate
psbZ gene + 36424 36612 189 Locate
trnG-UCC gene + 36880 36950 71 Locate
trnfM-CAU gene − 37128 37201 74 Locate
rps14 gene − 37346 37648 303 Locate
psaB gene − 37755 39959 2205 Locate
psaA gene − 39985 42237 2253 Locate
ycf3 gene − 42961 44905 1945 Locate
trnS-GGA gene + 45524 45610 87 Locate
rps4 gene − 45932 46537 606 Locate
trnT-UGU gene − 46896 46968 73 Locate
trnL-UAA gene + 47685 48237 553 Locate
trnF-GAA gene + 48549 48621 73 Locate
ndhJ gene − 49299 49775 477 Locate
ndhK gene − 49890 50567 678 Locate
ndhC gene − 50621 50983 363 Locate
trnV-UAC gene − 51612 52283 672 Locate
trnM-CAU gene + 52464 52536 73 Locate
trnT-GGU gene + 52470 52528 59 Locate
atpE gene − 52736 53137 402 Locate
atpB gene − 53134 54705 1572 Locate
rbcL gene + 55422 56885 1464 Locate
accD gene + 57562 58899 1338 Locate
psaI gene + 59302 59412 111 Locate
ycf4 gene + 59825 60379 555 Locate
cemA gene + 61009 61698 690 Locate
petA gene + 61897 62859 963 Locate
psbJ gene − 63822 63944 123 Locate
psbL gene − 64086 64202 117 Locate
psbF gene − 64226 64345 120 Locate
psbE gene − 64360 64611 252 Locate
petL gene + 65526 65621 96 Locate
petG gene + 65795 65908 114 Locate
trnW-CCA gene − 66044 66117 74 Locate
trnP-UGG gene − 66275 66348 74 Locate
trnP-GGG gene − 66277 66347 71 Locate
psaJ gene + 66642 66776 135 Locate
rpl33 gene + 67289 67489 201 Locate
rps18 gene + 67673 67984 312 Locate
rpl20 gene − 68216 68611 396 Locate
rps12 gene − 69449 69562 114 Locate
clpP gene − 69694 71658 1965 Locate
psbB gene + 72114 73640 1527 Locate
psbT gene + 73807 73923 117 Locate
psbN gene − 73991 74122 132 Locate
psbH gene + 74210 74440 231 Locate
petB gene + 74561 75930 1370 Locate
petD gene + 76126 77359 1234 Locate
rpoA gene − 77504 78556 1053 Locate
rps11 gene − 78628 79044 417 Locate
rpl36 gene − 79146 79259 114 Locate
infA gene − 79363 79596 234 Locate
rps8 gene − 79718 80128 411 Locate
rpl14 gene − 80309 80677 369 Locate
rpl16 gene − 80804 82020 1217 Locate
rps3 gene − 82188 82838 651 Locate
rpl22 gene − 82823 83296 474 Locate
rps19 gene − 83356 83634 279 Locate
rpl2 gene − 83694 85195 1502 Locate
rpl23 gene − 85214 85495 282 Locate
trnI-CAU gene − 85661 85734 74 Locate
ycf2 gene + 86065 91455 5391 Locate
ycf15 gene + 91520 91666 147 Locate
trnL-CAA gene − 91936 92016 81 Locate
ndhB gene − 92579 94790 2212 Locate
rps7 gene − 95059 95526 468 Locate
rps12 gene − 95580 96376 797 Locate
trnV-GAC gene + 98020 98091 72 Locate
rrn16 gene + 98321 99807 1487 Locate
trnI-GAU gene + 100110 101129 1020 Locate
trnA-UGC gene + 101194 102077 884 Locate
rrn23 gene + 102239 105048 2810 Locate
rrn4.5 gene + 105156 105258 103 Locate
rrn5 gene + 105519 105639 121 Locate
trnR-ACG gene + 105875 105948 74 Locate
trnN-GUU gene − 106502 106574 73 Locate
ycf1 gene + 107167 112398 5232 Locate
ndhF gene − 115229 117466 2238 Locate
rpl32 gene + 117986 118144 159 Locate
trnL-UAG gene + 118608 118687 80 Locate
ccsA gene + 118771 119751 981 Locate
ndhD gene − 119981 121516 1536 Locate
psaC gene − 121593 121838 246 Locate
ndhE gene − 122096 122401 306 Locate
ndhG gene − 122572 123102 531 Locate
ndhI gene − 123428 123934 507 Locate
ndhA gene − 124015 126136 2122 Locate
ndhH gene − 126138 127319 1182 Locate
rps15 gene − 127416 127688 273 Locate
ycf1 gene − 128095 133326 5232 Locate
trnN-GUU gene + 133919 133991 73 Locate
trnR-ACG gene − 134545 134618 74 Locate
rrn5 gene − 134854 134974 121 Locate
rrn4.5 gene − 135235 135337 103 Locate
rrn23 gene − 135436 138245 2810 Locate
trnA-UGC gene − 138416 139299 884 Locate
trnI-GAU gene − 139364 140383 1020 Locate
rrn16 gene − 140682 142168 1487 Locate
trnV-GAC gene − 142402 142473 72 Locate
rps12 gene + 144117 144913 797 Locate
rps7 gene + 144967 145434 468 Locate
ndhB gene + 145703 147914 2212 Locate
trnL-CAA gene + 148477 148557 81 Locate
ycf15 gene − 148827 148973 147 Locate
ycf2 gene − 149038 154428 5391 Locate
trnI-CAU gene + 154759 154832 74 Locate
rpl23 gene + 154998 155279 282 Locate
rpl2 gene + 155298 156799 1502 Locate
rps19 gene + 156859 156919 61 Locate
Status Available
Accession NC_067499.1
Length 156,931 bp
GC content 37.8%
Annotated genes 136
Gene sequence records 8
Translation Rna 39 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources