Scutellaria adenostegia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ058237.1 · 4–77 bp · −
psbA · PQ058237.1 · 374–1,432 bp · −
trnK-UUU · PQ058237.1 · 1,674–4,255 bp · −
matK · PQ058237.1 · 1,964–3,490 bp · −
rps16 · PQ058237.1 · 5,157–6,319 bp · −
trnQ-UUG · PQ058237.1 · 7,065–7,136 bp · −
trnS-GCU · PQ058237.1 · 8,256–8,343 bp · −
atpA · PQ058237.1 · 10,143–11,666 bp · −
atpF · PQ058237.1 · 11,748–12,977 bp · −
atpH · PQ058237.1 · 13,338–13,583 bp · −
atpI · PQ058237.1 · 14,562–15,305 bp · −
rps2 · PQ058237.1 · 15,651–16,361 bp · −
rpoC2 · PQ058237.1 · 16,576–20,781 bp · −
rpoC1 · PQ058237.1 · 20,936–23,772 bp · −
rpoB · PQ058237.1 · 23,799–27,011 bp · −
psbM · PQ058237.1 · 30,063–30,167 bp · −
trnD-GUC · PQ058237.1 · 30,693–30,766 bp · −
trnY-GUA · PQ058237.1 · 30,880–30,963 bp · −
trnE-UUC · PQ058237.1 · 31,023–31,095 bp · −
trnS-UGA · PQ058237.1 · 35,714–35,805 bp · −
trnfM-CAU · PQ058237.1 · 36,807–36,880 bp · −
rps14 · PQ058237.1 · 37,035–37,337 bp · −
psaB · PQ058237.1 · 37,467–39,671 bp · −
psaA · PQ058237.1 · 39,697–41,949 bp · −
ycf3 · PQ058237.1 · 42,642–44,564 bp · −
rps4 · PQ058237.1 · 45,810–46,415 bp · −
trnT-UGU · PQ058237.1 · 46,757–46,829 bp · −
ndhJ · PQ058237.1 · 49,085–49,561 bp · −
ndhK · PQ058237.1 · 49,670–50,347 bp · −
ndhC · PQ058237.1 · 50,401–50,763 bp · −
trnV-UAC · PQ058237.1 · 51,749–52,401 bp · −
atpE · PQ058237.1 · 52,856–53,257 bp · −
atpB · PQ058237.1 · 53,254–54,750 bp · −
psbJ · PQ058237.1 · 64,485–64,607 bp · −
psbL · PQ058237.1 · 64,741–64,962 bp · −
psbF · PQ058237.1 · 64,881–65,000 bp · −
psbE · PQ058237.1 · 65,015–65,266 bp · −
trnW-CCA · PQ058237.1 · 66,647–66,720 bp · −
trnP-UGG · PQ058237.1 · 66,890–66,963 bp · −
rpl20 · PQ058237.1 · 68,760–69,146 bp · −
rps12 · PQ058237.1 · 69,941–70,054 bp · −
rps12 · PQ058237.1 · 97,200–97,990 bp · −
clpP · PQ058237.1 · 70,196–72,124 bp · −
psbN · PQ058237.1 · 74,462–74,593 bp · −
rpoA · PQ058237.1 · 78,154–78,954 bp · −
rps11 · PQ058237.1 · 79,026–79,442 bp · −
rpl36 · PQ058237.1 · 79,544–79,657 bp · −
infA · PQ058237.1 · 79,752–79,985 bp · −
rps8 · PQ058237.1 · 80,108–80,518 bp · −
rpl14 · PQ058237.1 · 80,671–81,039 bp · −
rpl16 · PQ058237.1 · 81,166–82,399 bp · −
rps3 · PQ058237.1 · 82,555–83,217 bp · −
rpl22 · PQ058237.1 · 83,232–83,675 bp · −
rps19 · PQ058237.1 · 83,735–84,013 bp · −
rpl2 · PQ058237.1 · 84,068–85,549 bp · −
rpl23 · PQ058237.1 · 85,568–85,849 bp · −
trnI-CAU · PQ058237.1 · 86,009–86,082 bp · −
trnL-CAA · PQ058237.1 · 93,570–93,650 bp · −
ndhB · PQ058237.1 · 94,193–96,404 bp · −
rps7 · PQ058237.1 · 96,679–97,146 bp · −
trnN-GUU · PQ058237.1 · 108,028–108,099 bp · −
ndhF · PQ058237.1 · 109,156–111,417 bp · −
ndhD · PQ058237.1 · 113,780–115,309 bp · −
psaC · PQ058237.1 · 115,410–115,655 bp · −
ndhE · PQ058237.1 · 115,911–116,216 bp · −
ndhG · PQ058237.1 · 116,433–116,963 bp · −
ndhI · PQ058237.1 · 117,330–117,830 bp · −
ndhA · PQ058237.1 · 117,916–120,037 bp · −
ndhH · PQ058237.1 · 120,039–121,220 bp · −
rps15 · PQ058237.1 · 121,317–121,589 bp · −
ycf1 · PQ058237.1 · 121,787–127,423 bp · −
trnR-ACG · PQ058237.1 · 128,262–128,335 bp · −
rrn5 · PQ058237.1 · 128,570–128,690 bp · −
rrn4.5 · PQ058237.1 · 128,938–129,040 bp · −
rrn23 · PQ058237.1 · 129,139–131,950 bp · −
trnA-UGC · PQ058237.1 · 132,120–133,007 bp · −
trnI-GAU · PQ058237.1 · 133,072–134,092 bp · −
ycf68 · PQ058237.1 · 133,644–133,937 bp · −
rrn16 · PQ058237.1 · 134,391–135,881 bp · −
trnV-GAC · PQ058237.1 · 136,108–136,179 bp · −
ycf15 · PQ058237.1 · 142,431–142,628 bp · −
ycf2 · PQ058237.1 · 142,770–149,570 bp · −
psbK · PQ058237.1 · 7,461–7,646 bp · +
psbI · PQ058237.1 · 8,037–8,147 bp · +
trnG-UCC · PQ058237.1 · 9,044–9,800 bp · +
trnR-UCU · PQ058237.1 · 9,975–10,046 bp · +
trnC-GCA · PQ058237.1 · 28,172–28,242 bp · +
petN · PQ058237.1 · 28,957–29,046 bp · +
trnT-GGU · PQ058237.1 · 31,671–31,742 bp · +
psbD · PQ058237.1 · 33,048–34,109 bp · +
psbC · PQ058237.1 · 34,057–35,478 bp · +
psbZ · PQ058237.1 · 36,121–36,309 bp · +
trnG-GCC · PQ058237.1 · 36,589–36,659 bp · +
trnS-GGA · PQ058237.1 · 45,448–45,534 bp · +
trnL-UAA · PQ058237.1 · 47,510–48,069 bp · +
trnF-GAA · PQ058237.1 · 48,364–48,436 bp · +
trnM-CAU · PQ058237.1 · 52,590–52,662 bp · +
rbcL · PQ058237.1 · 55,501–56,964 bp · +
accD · PQ058237.1 · 57,678–59,156 bp · +
psaI · PQ058237.1 · 59,863–59,973 bp · +
ycf4 · PQ058237.1 · 60,407–60,961 bp · +
cemA · PQ058237.1 · 61,709–62,308 bp · +
petA · PQ058237.1 · 62,515–63,477 bp · +
petL · PQ058237.1 · 66,144–66,239 bp · +
petG · PQ058237.1 · 66,415–66,528 bp · +
psaJ · PQ058237.1 · 67,235–67,369 bp · +
rpl33 · PQ058237.1 · 67,845–68,045 bp · +
rps18 · PQ058237.1 · 68,220–68,525 bp · +
rps12 · PQ058237.1 · 137,751–138,541 bp · +
psbB · PQ058237.1 · 72,576–74,102 bp · +
psbT · PQ058237.1 · 74,294–74,401 bp · +
psbH · PQ058237.1 · 74,697–74,918 bp · +
petB · PQ058237.1 · 75,043–76,410 bp · +
petD · PQ058237.1 · 76,593–77,799 bp · +
ycf2 · PQ058237.1 · 86,171–92,971 bp · +
ycf15 · PQ058237.1 · 93,113–93,310 bp · +
trnV-GAC · PQ058237.1 · 99,562–99,633 bp · +
rrn16 · PQ058237.1 · 99,860–101,350 bp · +
trnI-GAU · PQ058237.1 · 101,649–102,669 bp · +
trnA-UGC · PQ058237.1 · 102,734–103,621 bp · +
rrn23 · PQ058237.1 · 103,791–106,602 bp · +
rrn4.5 · PQ058237.1 · 106,701–106,803 bp · +
rrn5 · PQ058237.1 · 107,051–107,171 bp · +
trnR-ACG · PQ058237.1 · 107,406–107,479 bp · +
rpl32 · PQ058237.1 · 111,745–111,921 bp · +
trnL-UAG · PQ058237.1 · 112,368–112,447 bp · +
ccsA · PQ058237.1 · 112,549–113,523 bp · +
trnN-GUU · PQ058237.1 · 127,642–127,713 bp · +
rps7 · PQ058237.1 · 138,595–139,062 bp · +
ndhB · PQ058237.1 · 139,337–141,548 bp · +
trnL-CAA · PQ058237.1 · 142,091–142,171 bp · +
trnI-CAU · PQ058237.1 · 149,659–149,732 bp · +
rpl23 · PQ058237.1 · 149,892–150,173 bp · +
rpl2 · PQ058237.1 · 150,192–151,673 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria adenostegia
ANNOTATED PLASTOME
PQ058237.1
151,773 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37943 75886 113830 151773 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 374 1432 1059 Locate
trnK-UUU gene − 1674 4255 2582 Locate
matK gene − 1964 3490 1527 Locate
rps16 gene − 5157 6319 1163 Locate
trnQ-UUG gene − 7065 7136 72 Locate
psbK gene + 7461 7646 186 Locate
psbI gene + 8037 8147 111 Locate
trnS-GCU gene − 8256 8343 88 Locate
trnG-UCC gene + 9044 9800 757 Locate
trnR-UCU gene + 9975 10046 72 Locate
atpA gene − 10143 11666 1524 Locate
atpF gene − 11748 12977 1230 Locate
atpH gene − 13338 13583 246 Locate
atpI gene − 14562 15305 744 Locate
rps2 gene − 15651 16361 711 Locate
rpoC2 gene − 16576 20781 4206 Locate
rpoC1 gene − 20936 23772 2837 Locate
rpoB gene − 23799 27011 3213 Locate
trnC-GCA gene + 28172 28242 71 Locate
petN gene + 28957 29046 90 Locate
psbM gene − 30063 30167 105 Locate
trnD-GUC gene − 30693 30766 74 Locate
trnY-GUA gene − 30880 30963 84 Locate
trnE-UUC gene − 31023 31095 73 Locate
trnT-GGU gene + 31671 31742 72 Locate
psbD gene + 33048 34109 1062 Locate
psbC gene + 34057 35478 1422 Locate
trnS-UGA gene − 35714 35805 92 Locate
psbZ gene + 36121 36309 189 Locate
trnG-GCC gene + 36589 36659 71 Locate
trnfM-CAU gene − 36807 36880 74 Locate
rps14 gene − 37035 37337 303 Locate
psaB gene − 37467 39671 2205 Locate
psaA gene − 39697 41949 2253 Locate
ycf3 gene − 42642 44564 1923 Locate
trnS-GGA gene + 45448 45534 87 Locate
rps4 gene − 45810 46415 606 Locate
trnT-UGU gene − 46757 46829 73 Locate
trnL-UAA gene + 47510 48069 560 Locate
trnF-GAA gene + 48364 48436 73 Locate
ndhJ gene − 49085 49561 477 Locate
ndhK gene − 49670 50347 678 Locate
ndhC gene − 50401 50763 363 Locate
trnV-UAC gene − 51749 52401 653 Locate
trnM-CAU gene + 52590 52662 73 Locate
atpE gene − 52856 53257 402 Locate
atpB gene − 53254 54750 1497 Locate
rbcL gene + 55501 56964 1464 Locate
accD gene + 57678 59156 1479 Locate
psaI gene + 59863 59973 111 Locate
ycf4 gene + 60407 60961 555 Locate
cemA gene + 61709 62308 600 Locate
petA gene + 62515 63477 963 Locate
psbJ gene − 64485 64607 123 Locate
psbL gene − 64741 64962 222 Locate
psbF gene − 64881 65000 120 Locate
psbE gene − 65015 65266 252 Locate
petL gene + 66144 66239 96 Locate
petG gene + 66415 66528 114 Locate
trnW-CCA gene − 66647 66720 74 Locate
trnP-UGG gene − 66890 66963 74 Locate
psaJ gene + 67235 67369 135 Locate
rpl33 gene + 67845 68045 201 Locate
rps18 gene + 68220 68525 306 Locate
rpl20 gene − 68760 69146 387 Locate
rps12 gene − 69941 70054 114 Locate
clpP gene − 70196 72124 1929 Locate
psbB gene + 72576 74102 1527 Locate
psbT gene + 74294 74401 108 Locate
psbN gene − 74462 74593 132 Locate
psbH gene + 74697 74918 222 Locate
petB gene + 75043 76410 1368 Locate
petD gene + 76593 77799 1207 Locate
rpoA gene − 78154 78954 801 Locate
rps11 gene − 79026 79442 417 Locate
rpl36 gene − 79544 79657 114 Locate
infA gene − 79752 79985 234 Locate
rps8 gene − 80108 80518 411 Locate
rpl14 gene − 80671 81039 369 Locate
rpl16 gene − 81166 82399 1234 Locate
rps3 gene − 82555 83217 663 Locate
rpl22 gene − 83232 83675 444 Locate
rps19 gene − 83735 84013 279 Locate
rpl2 gene − 84068 85549 1482 Locate
rpl23 gene − 85568 85849 282 Locate
trnI-CAU gene − 86009 86082 74 Locate
ycf2 gene + 86171 92971 6801 Locate
ycf15 gene + 93113 93310 198 Locate
trnL-CAA gene − 93570 93650 81 Locate
ndhB gene − 94193 96404 2212 Locate
rps7 gene − 96679 97146 468 Locate
rps12 gene − 97200 97990 791 Locate
trnV-GAC gene + 99562 99633 72 Locate
rrn16 gene + 99860 101350 1491 Locate
trnI-GAU gene + 101649 102669 1021 Locate
trnA-UGC gene + 102734 103621 888 Locate
rrn23 gene + 103791 106602 2812 Locate
rrn4.5 gene + 106701 106803 103 Locate
rrn5 gene + 107051 107171 121 Locate
trnR-ACG gene + 107406 107479 74 Locate
trnN-GUU gene − 108028 108099 72 Locate
ndhF gene − 109156 111417 2262 Locate
rpl32 gene + 111745 111921 177 Locate
trnL-UAG gene + 112368 112447 80 Locate
ccsA gene + 112549 113523 975 Locate
ndhD gene − 113780 115309 1530 Locate
psaC gene − 115410 115655 246 Locate
ndhE gene − 115911 116216 306 Locate
ndhG gene − 116433 116963 531 Locate
ndhI gene − 117330 117830 501 Locate
ndhA gene − 117916 120037 2122 Locate
ndhH gene − 120039 121220 1182 Locate
rps15 gene − 121317 121589 273 Locate
ycf1 gene − 121787 127423 5637 Locate
trnN-GUU gene + 127642 127713 72 Locate
trnR-ACG gene − 128262 128335 74 Locate
rrn5 gene − 128570 128690 121 Locate
rrn4.5 gene − 128938 129040 103 Locate
rrn23 gene − 129139 131950 2812 Locate
trnA-UGC gene − 132120 133007 888 Locate
trnI-GAU gene − 133072 134092 1021 Locate
ycf68 gene − 133644 133937 294 Locate
rrn16 gene − 134391 135881 1491 Locate
trnV-GAC gene − 136108 136179 72 Locate
rps12 gene + 137751 138541 791 Locate
rps7 gene + 138595 139062 468 Locate
ndhB gene + 139337 141548 2212 Locate
trnL-CAA gene + 142091 142171 81 Locate
ycf15 gene − 142431 142628 198 Locate
ycf2 gene − 142770 149570 6801 Locate
trnI-CAU gene + 149659 149732 74 Locate
rpl23 gene + 149892 150173 282 Locate
rpl2 gene + 150192 151673 1482 Locate
Status Available
Accession PQ058237.1
Length 151,773 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources