Coordinate-aware organelle record

Scutellaria agrestis chloroplast genome

Available PQ058275.1 151,670 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	376	1435	1059
trnK-UUU	gene	translation-rna	−	1675	4274	2599
matK	gene	other	−	1943	3515	1572
rps16	gene	ribosomal-protein	−	5183	6311	1128
trnQ-UUG	gene	translation-rna	−	7454	7526	72
psbK	gene	photosystem-ii	+	7851	8037	186
psbI	gene	photosystem-ii	+	8430	8541	111
trnS-GCU	gene	translation-rna	−	8651	8739	88
trnG-UCC	gene	translation-rna	+	9445	10205	760
trnR-UCU	gene	translation-rna	+	10379	10451	72
atpA	gene	atp-synthase	−	10547	12071	1524
atpF	gene	atp-synthase	−	12154	13389	1235
atpH	gene	atp-synthase	−	13752	13998	246
atpI	gene	atp-synthase	−	14980	15724	744
rps2	gene	ribosomal-protein	−	16066	16777	711
rpoC2	gene	rna-polymerase	−	16993	21202	4209
rpoC1	gene	rna-polymerase	−	21347	24183	2836
rpoB	gene	rna-polymerase	−	24209	27422	3213
trnC-GCA	gene	translation-rna	+	28379	28450	71
petN	gene	cytochrome	+	29162	29252	90
psbM	gene	photosystem-ii	−	30248	30362	114
trnD-GUC	gene	translation-rna	−	30889	30963	74
trnY-GUA	gene	translation-rna	−	31076	31160	84
trnE-UUC	gene	translation-rna	−	31219	31292	73
trnT-GGU	gene	translation-rna	+	31855	31927	72
psbD	gene	photosystem-ii	+	33239	34301	1062
psbC	gene	photosystem-ii	+	34248	35670	1422
trnS-UGA	gene	translation-rna	−	35913	36005	92
psbZ	gene	photosystem-ii	+	36324	36513	189
trnG-GCC	gene	translation-rna	+	36790	36861	71
trnfM-CAU	gene	translation-rna	−	37008	37082	74
rps14	gene	ribosomal-protein	−	37231	37534	303
psaB	gene	photosystem-i	−	37661	39866	2205
psaA	gene	photosystem-i	−	39891	42144	2253
ycf3	gene	other	−	42833	44760	1927
trnS-GGA	gene	translation-rna	+	45640	45727	87
rps4	gene	ribosomal-protein	−	46011	46617	606
trnT-UGU	gene	translation-rna	−	46956	47029	73
trnL-UAA	gene	translation-rna	+	47716	48284	568
trnF-GAA	gene	translation-rna	+	48583	48656	73
ndhJ	gene	nad-dehydrogenase	−	49303	49780	477
ndhK	gene	nad-dehydrogenase	−	49887	50565	678
ndhC	gene	nad-dehydrogenase	−	50618	50981	363
trnV-UAC	gene	translation-rna	−	51437	52091	654
trnM-CAU	gene	translation-rna	+	52271	52344	73
atpE	gene	atp-synthase	−	52552	52954	402
atpB	gene	atp-synthase	−	52950	54447	1497
rbcL	gene	other	+	55198	56659	1461
accD	gene	other	+	57359	58838	1479
psaI	gene	photosystem-i	+	59572	59683	111
ycf4	gene	other	+	60116	60671	555
cemA	gene	other	+	61411	62011	600
petA	gene	cytochrome	+	62217	63180	963
psbJ	gene	photosystem-ii	−	64204	64327	123
psbL	gene	photosystem-ii	−	64460	64682	222
psbF	gene	photosystem-ii	−	64600	64720	120
psbE	gene	photosystem-ii	−	64734	64986	252
petL	gene	cytochrome	+	65892	65988	96
petG	gene	cytochrome	+	66163	66277	114
trnW-CCA	gene	translation-rna	−	66395	66469	74
trnP-UGG	gene	translation-rna	−	66638	66712	74
psaJ	gene	photosystem-i	+	66984	67119	135
rpl33	gene	ribosomal-protein	+	67604	67805	201
rps18	gene	ribosomal-protein	+	67981	68287	306
rpl20	gene	ribosomal-protein	−	68526	68913	387
rps12	gene	ribosomal-protein	−	69709	97818	28109
rps12	gene	ribosomal-protein	+	69709	138455	68746
clpP	gene	other	−	69965	71907	1942
psbB	gene	photosystem-ii	+	72370	73897	1527
psbT	gene	photosystem-ii	+	74091	74199	108
psbN	gene	photosystem-ii	−	74259	74391	132
psbH	gene	photosystem-ii	+	74494	74716	222
petB	gene	cytochrome	+	74841	76212	1371
petD	gene	cytochrome	+	76400	77612	1212
rpoA	gene	rna-polymerase	−	77774	78782	1008
rps11	gene	ribosomal-protein	−	78853	79270	417
rpl36	gene	ribosomal-protein	−	79370	79484	114
infA	gene	other	−	79579	79813	234
rps8	gene	ribosomal-protein	−	79930	80329	399
rpl14	gene	ribosomal-protein	−	80494	80863	369
rpl16	gene	ribosomal-protein	−	80974	82239	1265
rps3	gene	ribosomal-protein	−	82394	83057	663
rpl22	gene	ribosomal-protein	−	83083	83515	432
rps19	gene	ribosomal-protein	−	83574	83853	279
rpl2	gene	ribosomal-protein	−	83907	85390	1483
rpl23	gene	ribosomal-protein	−	85408	85690	282
trnI-CAU	gene	translation-rna	−	85840	85914	74
ycf2	gene	other	+	86002	92812	6810
ycf15	gene	other	+	92902	93151	249
trnL-CAA	gene	translation-rna	−	93406	93487	81
ndhB	gene	nad-dehydrogenase	−	94020	96178	2158
rps7	gene	ribosomal-protein	−	96506	96974	468
trnV-GAC	gene	translation-rna	+	99381	99453	72
rrn16	gene	ribosomal-rna	+	99680	101171	1491
trnI-GAU	gene	translation-rna	+	101469	102489	1020
trnA-UGC	gene	translation-rna	+	102553	103441	888
rrn23	gene	ribosomal-rna	+	103610	106423	2813
rrn4.5	gene	ribosomal-rna	+	106521	106624	103
rrn5	gene	ribosomal-rna	+	106871	106992	121
trnR-ACG	gene	translation-rna	+	107226	107300	74
trnN-GUU	gene	translation-rna	−	107856	107928	72
ndhF	gene	nad-dehydrogenase	−	109004	111230	2226
rpl32	gene	ribosomal-protein	+	111748	111925	177
trnL-UAG	gene	translation-rna	+	112354	112434	80
ccsA	gene	other	+	112539	113514	975
ndhD	gene	nad-dehydrogenase	−	113748	115278	1530
psaC	gene	photosystem-i	−	115377	115623	246
ndhE	gene	nad-dehydrogenase	−	115861	116167	306
ndhG	gene	nad-dehydrogenase	−	116388	116919	531
ndhI	gene	nad-dehydrogenase	−	117282	117783	501
ndhA	gene	nad-dehydrogenase	−	117863	119961	2098
ndhH	gene	nad-dehydrogenase	−	119962	121144	1182
rps15	gene	ribosomal-protein	−	121232	121505	273
ycf1	gene	other	−	121801	127336	5535
trnN-GUU	gene	translation-rna	+	127554	127626	72
trnR-ACG	gene	translation-rna	−	128182	128256	74
rrn5	gene	ribosomal-rna	−	128490	128611	121
rrn4.5	gene	ribosomal-rna	−	128858	128961	103
rrn23	gene	ribosomal-rna	−	129059	131872	2813
trnA-UGC	gene	translation-rna	−	132041	132929	888
trnI-GAU	gene	translation-rna	−	132993	134013	1020
ycf68	gene	other	−	133564	133858	294
rrn16	gene	ribosomal-rna	−	134311	135802	1491
trnV-GAC	gene	translation-rna	−	136029	136101	72
rps7	gene	ribosomal-protein	+	138508	138976	468
ndhB	gene	nad-dehydrogenase	+	139304	141462	2158
trnL-CAA	gene	translation-rna	+	141995	142076	81
ycf15	gene	other	−	142331	142580	249
ycf2	gene	other	−	142670	149480	6810
trnI-CAU	gene	translation-rna	+	149568	149642	74
rpl23	gene	ribosomal-protein	+	149792	150074	282
rpl2	gene	ribosomal-protein	+	150092	151575	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058275.1DNA · accDPQ058275DNA · atpBPQ058275DNA · matKPQ058275DNA · ndhFPQ058275DNA · psbAPQ058275DNA · rbcLPQ058275DNA · rps12PQ058275DNA · ycf1PQ058275