Scutellaria albida chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ059215.1 · 2–75 bp · −
psbA · PQ059215.1 · 363–1,421 bp · −
trnK-UUU · PQ059215.1 · 1,663–4,256 bp · −
matK · PQ059215.1 · 1,952–3,496 bp · −
rps16 · PQ059215.1 · 5,163–6,330 bp · −
trnQ-UUG · PQ059215.1 · 7,467–7,538 bp · −
trnS-GCU · PQ059215.1 · 8,655–8,742 bp · −
atpA · PQ059215.1 · 10,525–12,048 bp · −
atpF · PQ059215.1 · 12,132–13,360 bp · −
atpH · PQ059215.1 · 13,726–13,971 bp · −
atpI · PQ059215.1 · 14,965–15,708 bp · −
rps2 · PQ059215.1 · 16,056–16,766 bp · −
rpoC2 · PQ059215.1 · 16,984–21,174 bp · −
rpoC1 · PQ059215.1 · 21,329–24,147 bp · −
rpoB · PQ059215.1 · 24,174–27,386 bp · −
psbM · PQ059215.1 · 30,465–30,569 bp · −
trnD-GUC · PQ059215.1 · 31,101–31,174 bp · −
trnY-GUA · PQ059215.1 · 31,288–31,371 bp · −
trnE-UUC · PQ059215.1 · 31,431–31,503 bp · −
trnS-UGA · PQ059215.1 · 36,128–36,219 bp · −
trnfM-CAU · PQ059215.1 · 37,221–37,294 bp · −
rps14 · PQ059215.1 · 37,444–37,746 bp · −
psaB · PQ059215.1 · 37,879–40,083 bp · −
psaA · PQ059215.1 · 40,109–42,361 bp · −
ycf3 · PQ059215.1 · 43,062–44,982 bp · −
rps4 · PQ059215.1 · 46,226–46,831 bp · −
trnT-UGU · PQ059215.1 · 47,173–47,245 bp · −
ndhJ · PQ059215.1 · 49,507–49,983 bp · −
ndhK · PQ059215.1 · 50,088–50,765 bp · −
ndhC · PQ059215.1 · 50,818–51,180 bp · −
trnV-UAC · PQ059215.1 · 52,169–52,827 bp · −
atpE · PQ059215.1 · 53,289–53,690 bp · −
atpB · PQ059215.1 · 53,687–55,183 bp · −
psbJ · PQ059215.1 · 64,349–64,471 bp · −
psbL · PQ059215.1 · 64,605–64,721 bp · −
psbF · PQ059215.1 · 64,745–64,864 bp · −
psbE · PQ059215.1 · 64,879–65,130 bp · −
trnW-CCA · PQ059215.1 · 66,546–66,619 bp · −
trnP-UGG · PQ059215.1 · 66,789–66,862 bp · −
rpl20 · PQ059215.1 · 68,664–69,050 bp · −
rps12 · PQ059215.1 · 69,834–69,959 bp · −
rps12 · PQ059215.1 · 97,147–97,937 bp · −
clpP · PQ059215.1 · 70,101–72,038 bp · −
psbN · PQ059215.1 · 74,364–74,495 bp · −
rpoA · PQ059215.1 · 77,876–78,889 bp · −
rps11 · PQ059215.1 · 78,961–79,377 bp · −
rpl36 · PQ059215.1 · 79,479–79,592 bp · −
infA · PQ059215.1 · 79,688–79,921 bp · −
rps8 · PQ059215.1 · 80,044–80,454 bp · −
rpl14 · PQ059215.1 · 80,611–80,979 bp · −
rpl16 · PQ059215.1 · 81,106–82,336 bp · −
rps3 · PQ059215.1 · 82,491–83,153 bp · −
rpl22 · PQ059215.1 · 83,155–83,610 bp · −
rps19 · PQ059215.1 · 83,670–83,948 bp · −
rpl2 · PQ059215.1 · 84,004–85,486 bp · −
rpl23 · PQ059215.1 · 85,505–85,786 bp · −
trnI-CAU · PQ059215.1 · 85,946–86,019 bp · −
trnL-CAA · PQ059215.1 · 93,517–93,597 bp · −
ndhB · PQ059215.1 · 94,140–96,351 bp · −
rps7 · PQ059215.1 · 96,626–97,093 bp · −
trnN-GUU · PQ059215.1 · 107,975–108,046 bp · −
ndhF · PQ059215.1 · 109,123–111,363 bp · −
ndhD · PQ059215.1 · 113,862–115,364 bp · −
psaC · PQ059215.1 · 115,498–115,743 bp · −
ndhE · PQ059215.1 · 115,999–116,304 bp · −
ndhG · PQ059215.1 · 116,528–117,058 bp · −
ndhI · PQ059215.1 · 117,407–117,907 bp · −
ndhA · PQ059215.1 · 117,988–120,091 bp · −
ndhH · PQ059215.1 · 120,093–121,274 bp · −
rps15 · PQ059215.1 · 121,371–121,643 bp · −
ycf1 · PQ059215.1 · 121,912–127,587 bp · −
trnR-ACG · PQ059215.1 · 128,433–128,506 bp · −
rrn5 · PQ059215.1 · 128,741–128,861 bp · −
rrn4.5 · PQ059215.1 · 129,109–129,211 bp · −
rrn23 · PQ059215.1 · 129,310–132,121 bp · −
trnA-UGC · PQ059215.1 · 132,291–133,176 bp · −
trnI-GAU · PQ059215.1 · 133,241–134,259 bp · −
ycf68 · PQ059215.1 · 133,811–134,104 bp · −
rrn16 · PQ059215.1 · 134,558–136,048 bp · −
trnV-GAC · PQ059215.1 · 136,271–136,342 bp · −
ycf15 · PQ059215.1 · 142,596–142,793 bp · −
ycf2 · PQ059215.1 · 142,935–149,744 bp · −
psbK · PQ059215.1 · 7,863–8,048 bp · +
psbI · PQ059215.1 · 8,446–8,556 bp · +
trnG-UCC · PQ059215.1 · 9,437–10,191 bp · +
trnR-UCU · PQ059215.1 · 10,357–10,428 bp · +
trnC-GCA · PQ059215.1 · 28,563–28,633 bp · +
petN · PQ059215.1 · 29,369–29,458 bp · +
trnT-GGU · PQ059215.1 · 32,075–32,146 bp · +
psbD · PQ059215.1 · 33,463–34,524 bp · +
psbC · PQ059215.1 · 34,472–35,893 bp · +
psbZ · PQ059215.1 · 36,539–36,727 bp · +
trnG-GCC · PQ059215.1 · 37,000–37,070 bp · +
trnS-GGA · PQ059215.1 · 45,856–45,942 bp · +
trnL-UAA · PQ059215.1 · 47,913–48,479 bp · +
trnF-GAA · PQ059215.1 · 48,785–48,857 bp · +
trnM-CAU · PQ059215.1 · 53,008–53,080 bp · +
rbcL · PQ059215.1 · 55,931–57,394 bp · +
accD · PQ059215.1 · 58,120–59,610 bp · +
psaI · PQ059215.1 · 59,848–59,958 bp · +
ycf4 · PQ059215.1 · 60,392–60,946 bp · +
cemA · PQ059215.1 · 61,560–62,159 bp · +
petA · PQ059215.1 · 62,366–63,328 bp · +
petL · PQ059215.1 · 66,053–66,148 bp · +
petG · PQ059215.1 · 66,324–66,437 bp · +
psaJ · PQ059215.1 · 67,135–67,269 bp · +
rpl33 · PQ059215.1 · 67,743–67,943 bp · +
rps18 · PQ059215.1 · 68,118–68,423 bp · +
rps12 · PQ059215.1 · 137,915–138,705 bp · +
psbB · PQ059215.1 · 72,492–74,018 bp · +
psbT · PQ059215.1 · 74,196–74,303 bp · +
psbH · PQ059215.1 · 74,599–74,820 bp · +
petB · PQ059215.1 · 74,945–76,313 bp · +
petD · PQ059215.1 · 76,502–77,713 bp · +
ycf2 · PQ059215.1 · 86,108–92,917 bp · +
ycf15 · PQ059215.1 · 93,059–93,256 bp · +
trnV-GAC · PQ059215.1 · 99,510–99,581 bp · +
rrn16 · PQ059215.1 · 99,804–101,294 bp · +
trnI-GAU · PQ059215.1 · 101,593–102,611 bp · +
trnA-UGC · PQ059215.1 · 102,676–103,561 bp · +
rrn23 · PQ059215.1 · 103,731–106,542 bp · +
rrn4.5 · PQ059215.1 · 106,641–106,743 bp · +
rrn5 · PQ059215.1 · 106,991–107,111 bp · +
trnR-ACG · PQ059215.1 · 107,346–107,419 bp · +
rpl32 · PQ059215.1 · 111,877–112,053 bp · +
trnL-UAG · PQ059215.1 · 112,488–112,567 bp · +
ccsA · PQ059215.1 · 112,650–113,624 bp · +
trnN-GUU · PQ059215.1 · 127,806–127,877 bp · +
rps7 · PQ059215.1 · 138,759–139,226 bp · +
ndhB · PQ059215.1 · 139,501–141,712 bp · +
trnL-CAA · PQ059215.1 · 142,255–142,335 bp · +
trnI-CAU · PQ059215.1 · 149,833–149,906 bp · +
rpl23 · PQ059215.1 · 150,066–150,347 bp · +
rpl2 · PQ059215.1 · 150,366–151,848 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria albida
ANNOTATED PLASTOME
PQ059215.1
151,946 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37986 75973 113960 151946 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 363 1421 1059 Locate
trnK-UUU gene − 1663 4256 2594 Locate
matK gene − 1952 3496 1545 Locate
rps16 gene − 5163 6330 1168 Locate
trnQ-UUG gene − 7467 7538 72 Locate
psbK gene + 7863 8048 186 Locate
psbI gene + 8446 8556 111 Locate
trnS-GCU gene − 8655 8742 88 Locate
trnG-UCC gene + 9437 10191 755 Locate
trnR-UCU gene + 10357 10428 72 Locate
atpA gene − 10525 12048 1524 Locate
atpF gene − 12132 13360 1229 Locate
atpH gene − 13726 13971 246 Locate
atpI gene − 14965 15708 744 Locate
rps2 gene − 16056 16766 711 Locate
rpoC2 gene − 16984 21174 4191 Locate
rpoC1 gene − 21329 24147 2819 Locate
rpoB gene − 24174 27386 3213 Locate
trnC-GCA gene + 28563 28633 71 Locate
petN gene + 29369 29458 90 Locate
psbM gene − 30465 30569 105 Locate
trnD-GUC gene − 31101 31174 74 Locate
trnY-GUA gene − 31288 31371 84 Locate
trnE-UUC gene − 31431 31503 73 Locate
trnT-GGU gene + 32075 32146 72 Locate
psbD gene + 33463 34524 1062 Locate
psbC gene + 34472 35893 1422 Locate
trnS-UGA gene − 36128 36219 92 Locate
psbZ gene + 36539 36727 189 Locate
trnG-GCC gene + 37000 37070 71 Locate
trnfM-CAU gene − 37221 37294 74 Locate
rps14 gene − 37444 37746 303 Locate
psaB gene − 37879 40083 2205 Locate
psaA gene − 40109 42361 2253 Locate
ycf3 gene − 43062 44982 1921 Locate
trnS-GGA gene + 45856 45942 87 Locate
rps4 gene − 46226 46831 606 Locate
trnT-UGU gene − 47173 47245 73 Locate
trnL-UAA gene + 47913 48479 567 Locate
trnF-GAA gene + 48785 48857 73 Locate
ndhJ gene − 49507 49983 477 Locate
ndhK gene − 50088 50765 678 Locate
ndhC gene − 50818 51180 363 Locate
trnV-UAC gene − 52169 52827 659 Locate
trnM-CAU gene + 53008 53080 73 Locate
atpE gene − 53289 53690 402 Locate
atpB gene − 53687 55183 1497 Locate
rbcL gene + 55931 57394 1464 Locate
accD gene + 58120 59610 1491 Locate
psaI gene + 59848 59958 111 Locate
ycf4 gene + 60392 60946 555 Locate
cemA gene + 61560 62159 600 Locate
petA gene + 62366 63328 963 Locate
psbJ gene − 64349 64471 123 Locate
psbL gene − 64605 64721 117 Locate
psbF gene − 64745 64864 120 Locate
psbE gene − 64879 65130 252 Locate
petL gene + 66053 66148 96 Locate
petG gene + 66324 66437 114 Locate
trnW-CCA gene − 66546 66619 74 Locate
trnP-UGG gene − 66789 66862 74 Locate
psaJ gene + 67135 67269 135 Locate
rpl33 gene + 67743 67943 201 Locate
rps18 gene + 68118 68423 306 Locate
rpl20 gene − 68664 69050 387 Locate
rps12 gene − 69834 69959 126 Locate
clpP gene − 70101 72038 1938 Locate
psbB gene + 72492 74018 1527 Locate
psbT gene + 74196 74303 108 Locate
psbN gene − 74364 74495 132 Locate
psbH gene + 74599 74820 222 Locate
petB gene + 74945 76313 1369 Locate
petD gene + 76502 77713 1212 Locate
rpoA gene − 77876 78889 1014 Locate
rps11 gene − 78961 79377 417 Locate
rpl36 gene − 79479 79592 114 Locate
infA gene − 79688 79921 234 Locate
rps8 gene − 80044 80454 411 Locate
rpl14 gene − 80611 80979 369 Locate
rpl16 gene − 81106 82336 1231 Locate
rps3 gene − 82491 83153 663 Locate
rpl22 gene − 83155 83610 456 Locate
rps19 gene − 83670 83948 279 Locate
rpl2 gene − 84004 85486 1483 Locate
rpl23 gene − 85505 85786 282 Locate
trnI-CAU gene − 85946 86019 74 Locate
ycf2 gene + 86108 92917 6810 Locate
ycf15 gene + 93059 93256 198 Locate
trnL-CAA gene − 93517 93597 81 Locate
ndhB gene − 94140 96351 2212 Locate
rps7 gene − 96626 97093 468 Locate
rps12 gene − 97147 97937 791 Locate
trnV-GAC gene + 99510 99581 72 Locate
rrn16 gene + 99804 101294 1491 Locate
trnI-GAU gene + 101593 102611 1019 Locate
trnA-UGC gene + 102676 103561 886 Locate
rrn23 gene + 103731 106542 2812 Locate
rrn4.5 gene + 106641 106743 103 Locate
rrn5 gene + 106991 107111 121 Locate
trnR-ACG gene + 107346 107419 74 Locate
trnN-GUU gene − 107975 108046 72 Locate
ndhF gene − 109123 111363 2241 Locate
rpl32 gene + 111877 112053 177 Locate
trnL-UAG gene + 112488 112567 80 Locate
ccsA gene + 112650 113624 975 Locate
ndhD gene − 113862 115364 1503 Locate
psaC gene − 115498 115743 246 Locate
ndhE gene − 115999 116304 306 Locate
ndhG gene − 116528 117058 531 Locate
ndhI gene − 117407 117907 501 Locate
ndhA gene − 117988 120091 2104 Locate
ndhH gene − 120093 121274 1182 Locate
rps15 gene − 121371 121643 273 Locate
ycf1 gene − 121912 127587 5676 Locate
trnN-GUU gene + 127806 127877 72 Locate
trnR-ACG gene − 128433 128506 74 Locate
rrn5 gene − 128741 128861 121 Locate
rrn4.5 gene − 129109 129211 103 Locate
rrn23 gene − 129310 132121 2812 Locate
trnA-UGC gene − 132291 133176 886 Locate
trnI-GAU gene − 133241 134259 1019 Locate
ycf68 gene − 133811 134104 294 Locate
rrn16 gene − 134558 136048 1491 Locate
trnV-GAC gene − 136271 136342 72 Locate
rps12 gene + 137915 138705 791 Locate
rps7 gene + 138759 139226 468 Locate
ndhB gene + 139501 141712 2212 Locate
trnL-CAA gene + 142255 142335 81 Locate
ycf15 gene − 142596 142793 198 Locate
ycf2 gene − 142935 149744 6810 Locate
trnI-CAU gene + 149833 149906 74 Locate
rpl23 gene + 150066 150347 282 Locate
rpl2 gene + 150366 151848 1483 Locate
Status Available
Accession PQ059215.1
Length 151,946 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources