Coordinate-aware organelle record

Scutellaria alpina chloroplast genome

Available PQ059196.1 151,828 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6316	1160
trnQ-UUG	gene	translation-rna	−	7060	7132	72
psbK	gene	photosystem-ii	+	7456	7642	186
psbI	gene	photosystem-ii	+	8031	8142	111
trnS-GCU	gene	translation-rna	−	8260	8348	88
trnG-UCC	gene	translation-rna	+	9052	9809	757
trnR-UCU	gene	translation-rna	+	9983	10055	72
atpA	gene	atp-synthase	−	10151	11675	1524
atpF	gene	atp-synthase	−	11756	12992	1236
atpH	gene	atp-synthase	−	13352	13598	246
atpI	gene	atp-synthase	−	14573	15317	744
rps2	gene	ribosomal-protein	−	15662	16373	711
rpoC2	gene	rna-polymerase	−	16587	20793	4206
rpoC1	gene	rna-polymerase	−	20947	23785	2838
rpoB	gene	rna-polymerase	−	23811	27024	3213
trnC-GCA	gene	translation-rna	+	28184	28255	71
petN	gene	cytochrome	+	28971	29061	90
psbM	gene	photosystem-ii	−	30116	30221	105
trnD-GUC	gene	translation-rna	−	30746	30820	74
trnY-GUA	gene	translation-rna	−	30933	31017	84
trnE-UUC	gene	translation-rna	−	31076	31149	73
trnT-GGU	gene	translation-rna	+	31724	31796	72
psbD	gene	photosystem-ii	+	33101	34163	1062
psbC	gene	photosystem-ii	+	34110	35532	1422
trnS-UGA	gene	translation-rna	−	35767	35859	92
psbZ	gene	photosystem-ii	+	36174	36363	189
trnG-GCC	gene	translation-rna	+	36645	36716	71
trnfM-CAU	gene	translation-rna	−	36864	36938	74
rps14	gene	ribosomal-protein	−	37092	37395	303
psaB	gene	photosystem-i	−	37523	39728	2205
psaA	gene	photosystem-i	−	39753	42006	2253
ycf3	gene	other	−	42697	44640	1943
trnS-GGA	gene	translation-rna	+	45522	45609	87
rps4	gene	ribosomal-protein	−	45884	46490	606
trnT-UGU	gene	translation-rna	−	46829	46902	73
trnL-UAA	gene	translation-rna	+	47577	48137	560
trnF-GAA	gene	translation-rna	+	48436	48509	73
ndhJ	gene	nad-dehydrogenase	−	49157	49634	477
ndhK	gene	nad-dehydrogenase	−	49742	50420	678
ndhC	gene	nad-dehydrogenase	−	50473	50836	363
trnV-UAC	gene	translation-rna	−	51821	52474	653
trnM-CAU	gene	translation-rna	+	52662	52735	73
atpE	gene	atp-synthase	−	52928	53330	402
atpB	gene	atp-synthase	−	53326	54823	1497
rbcL	gene	other	+	55573	57037	1464
accD	gene	other	+	57750	59229	1479
psaI	gene	photosystem-i	+	59935	60046	111
ycf4	gene	other	+	60481	61036	555
cemA	gene	other	+	61785	62385	600
petA	gene	cytochrome	+	62591	63554	963
psbJ	gene	photosystem-ii	−	64557	64680	123
psbL	gene	photosystem-ii	−	64813	65035	222
psbF	gene	photosystem-ii	−	64953	65073	120
psbE	gene	photosystem-ii	−	65087	65339	252
petL	gene	cytochrome	+	66216	66312	96
petG	gene	cytochrome	+	66487	66601	114
trnW-CCA	gene	translation-rna	−	66719	66793	74
trnP-UGG	gene	translation-rna	−	66962	67036	74
psaJ	gene	photosystem-i	+	67244	67442	198
rpl33	gene	ribosomal-protein	+	67917	68118	201
rps18	gene	ribosomal-protein	+	68292	68598	306
rpl20	gene	ribosomal-protein	−	68832	69219	387
rps12	gene	ribosomal-protein	−	70000	98061	28061
rps12	gene	ribosomal-protein	+	70000	138596	68596
clpP	gene	other	−	70267	72196	1929
psbB	gene	photosystem-ii	+	72647	74174	1527
psbT	gene	photosystem-ii	+	74365	74473	108
psbN	gene	photosystem-ii	−	74533	74665	132
psbH	gene	photosystem-ii	+	74768	74990	222
petB	gene	cytochrome	+	75114	76482	1368
petD	gene	cytochrome	+	76664	77871	1207
rpoA	gene	rna-polymerase	−	78225	79026	801
rps11	gene	ribosomal-protein	−	79097	79514	417
rpl36	gene	ribosomal-protein	−	79615	79729	114
infA	gene	other	−	79823	80057	234
rps8	gene	ribosomal-protein	−	80180	80591	411
rpl14	gene	ribosomal-protein	−	80742	81111	369
rpl16	gene	ribosomal-protein	−	81237	82471	1234
rps3	gene	ribosomal-protein	−	82626	83289	663
rpl22	gene	ribosomal-protein	−	83290	83746	456
rps19	gene	ribosomal-protein	−	83805	84084	279
rpl2	gene	ribosomal-protein	−	84138	85620	1482
rpl23	gene	ribosomal-protein	−	85638	85920	282
trnI-CAU	gene	translation-rna	−	86079	86153	74
ycf2	gene	other	+	86241	93042	6801
ycf15	gene	other	+	93132	93381	249
trnL-CAA	gene	translation-rna	−	93640	93721	81
ndhB	gene	nad-dehydrogenase	−	94263	96421	2158
rps7	gene	ribosomal-protein	−	96749	97217	468
trnV-GAC	gene	translation-rna	+	99632	99704	72
rrn16	gene	ribosomal-rna	+	99930	101421	1491
trnI-GAU	gene	translation-rna	+	101719	102740	1021
trnA-UGC	gene	translation-rna	+	102804	103692	888
rrn23	gene	ribosomal-rna	+	103861	106673	2812
rrn4.5	gene	ribosomal-rna	+	106771	106874	103
rrn5	gene	ribosomal-rna	+	107121	107242	121
trnR-ACG	gene	translation-rna	+	107476	107550	74
trnN-GUU	gene	translation-rna	−	108098	108170	72
ndhF	gene	nad-dehydrogenase	−	109226	111488	2262
rpl32	gene	ribosomal-protein	+	111814	111991	177
trnL-UAG	gene	translation-rna	+	112440	112520	80
ccsA	gene	other	+	112621	113596	975
ndhD	gene	nad-dehydrogenase	−	113851	115354	1503
psaC	gene	photosystem-i	−	115481	115727	246
ndhE	gene	nad-dehydrogenase	−	115982	116288	306
ndhG	gene	nad-dehydrogenase	−	116504	117035	531
ndhI	gene	nad-dehydrogenase	−	117401	117902	501
ndhA	gene	nad-dehydrogenase	−	117987	120108	2121
ndhH	gene	nad-dehydrogenase	−	120109	121291	1182
rps15	gene	ribosomal-protein	−	121387	121660	273
ycf1	gene	other	−	121853	127478	5625
trnN-GUU	gene	translation-rna	+	127696	127768	72
trnR-ACG	gene	translation-rna	−	128316	128390	74
rrn5	gene	ribosomal-rna	−	128624	128745	121
rrn4.5	gene	ribosomal-rna	−	128992	129095	103
rrn23	gene	ribosomal-rna	−	129193	132005	2812
trnA-UGC	gene	translation-rna	−	132174	133062	888
trnI-GAU	gene	translation-rna	−	133126	134147	1021
ycf68	gene	other	−	133698	133992	294
rrn16	gene	ribosomal-rna	−	134445	135936	1491
trnV-GAC	gene	translation-rna	−	136162	136234	72
rps7	gene	ribosomal-protein	+	138649	139117	468
ndhB	gene	nad-dehydrogenase	+	139445	141603	2158
trnL-CAA	gene	translation-rna	+	142145	142226	81
ycf15	gene	other	−	142485	142734	249
ycf2	gene	other	−	142824	149625	6801
trnI-CAU	gene	translation-rna	+	149713	149787	74
rpl23	gene	ribosomal-protein	+	149946	150228	282
rpl2	gene	ribosomal-protein	+	150246	151728	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059196.1DNA · accDPQ059196DNA · atpBPQ059196DNA · matKPQ059196DNA · ndhFPQ059196DNA · psbAPQ059196DNA · rbcLPQ059196DNA · rps12PQ059196DNA · ycf1PQ059196