Coordinate-aware organelle record

Scutellaria altaica chloroplast genome

Available PQ075892.1 151,716 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5145	6303	1158
trnQ-UUG	gene	translation-rna	−	7047	7119	72
psbK	gene	photosystem-ii	+	7443	7629	186
psbI	gene	photosystem-ii	+	8018	8129	111
trnS-GCU	gene	translation-rna	−	8249	8337	88
trnG-UCC	gene	translation-rna	+	9033	9790	757
trnR-UCU	gene	translation-rna	+	9964	10036	72
atpA	gene	atp-synthase	−	10132	11656	1524
atpF	gene	atp-synthase	−	11737	12966	1229
atpH	gene	atp-synthase	−	13323	13569	246
atpI	gene	atp-synthase	−	14556	15300	744
rps2	gene	ribosomal-protein	−	15645	16356	711
rpoC2	gene	rna-polymerase	−	16570	20776	4206
rpoC1	gene	rna-polymerase	−	20930	23767	2837
rpoB	gene	rna-polymerase	−	23793	27006	3213
trnC-GCA	gene	translation-rna	+	28166	28237	71
petN	gene	cytochrome	+	28955	29045	90
psbM	gene	photosystem-ii	−	30022	30127	105
trnD-GUC	gene	translation-rna	−	30652	30726	74
trnY-GUA	gene	translation-rna	−	30839	30923	84
trnE-UUC	gene	translation-rna	−	30982	31055	73
trnT-GGU	gene	translation-rna	+	31630	31702	72
psbD	gene	photosystem-ii	+	33006	34068	1062
psbC	gene	photosystem-ii	+	34015	35437	1422
trnS-UGA	gene	translation-rna	−	35672	35764	92
psbZ	gene	photosystem-ii	+	36079	36268	189
trnG-GCC	gene	translation-rna	+	36542	36613	71
trnfM-CAU	gene	translation-rna	−	36757	36831	74
rps14	gene	ribosomal-protein	−	36985	37288	303
psaB	gene	photosystem-i	−	37416	39621	2205
psaA	gene	photosystem-i	−	39646	41899	2253
ycf3	gene	other	−	42585	44508	1923
trnS-GGA	gene	translation-rna	+	45391	45478	87
rps4	gene	ribosomal-protein	−	45753	46359	606
trnT-UGU	gene	translation-rna	−	46703	46776	73
trnL-UAA	gene	translation-rna	+	47451	48011	560
trnF-GAA	gene	translation-rna	+	48311	48384	73
ndhJ	gene	nad-dehydrogenase	−	49031	49508	477
ndhK	gene	nad-dehydrogenase	−	49616	50294	678
ndhC	gene	nad-dehydrogenase	−	50347	50710	363
trnV-UAC	gene	translation-rna	−	51691	52344	653
trnM-CAU	gene	translation-rna	+	52532	52605	73
atpE	gene	atp-synthase	−	52798	53200	402
atpB	gene	atp-synthase	−	53196	54693	1497
rbcL	gene	other	+	55443	56907	1464
accD	gene	other	+	57620	59099	1479
psaI	gene	photosystem-i	+	59805	59916	111
ycf4	gene	other	+	60349	60904	555
cemA	gene	other	+	61652	62252	600
petA	gene	cytochrome	+	62458	63421	963
psbJ	gene	photosystem-ii	−	64428	64551	123
psbL	gene	photosystem-ii	−	64684	64906	222
psbF	gene	photosystem-ii	−	64824	64944	120
psbE	gene	photosystem-ii	−	64958	65210	252
petL	gene	cytochrome	+	66087	66183	96
petG	gene	cytochrome	+	66358	66472	114
trnW-CCA	gene	translation-rna	−	66590	66664	74
trnP-UGG	gene	translation-rna	−	66833	66907	74
psaJ	gene	photosystem-i	+	67178	67313	135
rpl33	gene	ribosomal-protein	+	67788	67989	201
rps18	gene	ribosomal-protein	+	68163	68469	306
rpl20	gene	ribosomal-protein	−	68703	69090	387
rps12	gene	ribosomal-protein	−	69873	97935	28062
rps12	gene	ribosomal-protein	+	69873	138484	68611
clpP	gene	other	−	70140	72069	1929
psbB	gene	photosystem-ii	+	72520	74047	1527
psbT	gene	photosystem-ii	+	74238	74346	108
psbN	gene	photosystem-ii	−	74406	74538	132
psbH	gene	photosystem-ii	+	74641	74863	222
petB	gene	cytochrome	+	74987	76355	1368
petD	gene	cytochrome	+	76537	77744	1207
rpoA	gene	rna-polymerase	−	78098	78899	801
rps11	gene	ribosomal-protein	−	78970	79387	417
rpl36	gene	ribosomal-protein	−	79488	79602	114
infA	gene	other	−	79696	79930	234
rps8	gene	ribosomal-protein	−	80053	80464	411
rpl14	gene	ribosomal-protein	−	80616	80985	369
rpl16	gene	ribosomal-protein	−	81111	82345	1234
rps3	gene	ribosomal-protein	−	82500	83163	663
rpl22	gene	ribosomal-protein	−	83164	83620	456
rps19	gene	ribosomal-protein	−	83679	83958	279
rpl2	gene	ribosomal-protein	−	84012	85494	1482
rpl23	gene	ribosomal-protein	−	85512	85794	282
trnI-CAU	gene	translation-rna	−	85953	86027	74
ycf2	gene	other	+	86115	92916	6801
ycf15	gene	other	+	93057	93255	198
trnL-CAA	gene	translation-rna	−	93514	93595	81
ndhB	gene	nad-dehydrogenase	−	94137	96295	2158
rps7	gene	ribosomal-protein	−	96623	97091	468
trnV-GAC	gene	translation-rna	+	99506	99578	72
rrn16	gene	ribosomal-rna	+	99804	101295	1491
trnI-GAU	gene	translation-rna	+	101593	102614	1021
trnA-UGC	gene	translation-rna	+	102678	103566	888
rrn23	gene	ribosomal-rna	+	103735	106547	2812
rrn4.5	gene	ribosomal-rna	+	106645	106748	103
rrn5	gene	ribosomal-rna	+	106995	107116	121
trnR-ACG	gene	translation-rna	+	107350	107424	74
trnN-GUU	gene	translation-rna	−	107972	108044	72
ndhF	gene	nad-dehydrogenase	−	109100	111362	2262
rpl32	gene	ribosomal-protein	+	111688	111865	177
trnL-UAG	gene	translation-rna	+	112311	112391	80
ccsA	gene	other	+	112491	113466	975
ndhD	gene	nad-dehydrogenase	−	113722	115252	1530
psaC	gene	photosystem-i	−	115352	115598	246
ndhE	gene	nad-dehydrogenase	−	115853	116159	306
ndhG	gene	nad-dehydrogenase	−	116375	116906	531
ndhI	gene	nad-dehydrogenase	−	117272	117773	501
ndhA	gene	nad-dehydrogenase	−	117858	119980	2122
ndhH	gene	nad-dehydrogenase	−	119981	121193	1212
rps15	gene	ribosomal-protein	−	121259	121532	273
ycf1	gene	other	−	121729	127366	5637
trnN-GUU	gene	translation-rna	+	127584	127656	72
trnR-ACG	gene	translation-rna	−	128204	128278	74
rrn5	gene	ribosomal-rna	−	128512	128633	121
rrn4.5	gene	ribosomal-rna	−	128880	128983	103
rrn23	gene	ribosomal-rna	−	129081	131893	2812
trnA-UGC	gene	translation-rna	−	132062	132950	888
trnI-GAU	gene	translation-rna	−	133014	134035	1021
ycf68	gene	other	−	133586	133880	294
rrn16	gene	ribosomal-rna	−	134333	135824	1491
trnV-GAC	gene	translation-rna	−	136050	136122	72
rps7	gene	ribosomal-protein	+	138537	139005	468
ndhB	gene	nad-dehydrogenase	+	139333	141491	2158
trnL-CAA	gene	translation-rna	+	142033	142114	81
ycf15	gene	other	−	142373	142571	198
ycf2	gene	other	−	142712	149513	6801
trnI-CAU	gene	translation-rna	+	149601	149675	74
rpl23	gene	ribosomal-protein	+	149834	150116	282
rpl2	gene	ribosomal-protein	+	150134	151616	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075892.1DNA · accDPQ075892DNA · atpBPQ075892DNA · matKPQ075892DNA · ndhFPQ075892DNA · psbAPQ075892DNA · rbcLPQ075892DNA · rps12PQ075892DNA · ycf1PQ075892