Coordinate-aware organelle record

Scutellaria altamaha chloroplast genome

Available MW420957.1 151,521 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1683	4270	2587
matK	gene	other	−	1980	3516	1536
rps16	gene	ribosomal-protein	−	5170	6336	1166
trnQ-UUC	gene	translation-rna	−	7428	7500	72
psbK	gene	photosystem-ii	+	7832	8018	186
psbI	gene	photosystem-ii	+	8402	8513	111
trnS-GCU	gene	translation-rna	−	8622	8710	88
trnG-CGA	gene	translation-rna	+	9383	10145	762
trnR-UCU	gene	translation-rna	+	10319	10391	72
atpA	gene	atp-synthase	−	10493	12017	1524
atpF	gene	atp-synthase	−	12089	13323	1234
atpH	gene	atp-synthase	−	13685	13931	246
atpI	gene	atp-synthase	−	14918	15662	744
rps2	gene	ribosomal-protein	−	16001	16712	711
rpoC2	gene	rna-polymerase	−	16934	21128	4194
rpoC1	gene	rna-polymerase	−	21282	24091	2809
rpoB	gene	rna-polymerase	−	24117	27330	3213
trnC-GCA	gene	translation-rna	+	28486	28557	71
petN	gene	cytochrome	+	29268	29358	90
psbM	gene	photosystem-ii	−	30358	30463	105
trnD-GUC	gene	translation-rna	−	30992	31066	74
trnY-GUA	gene	translation-rna	−	31185	31269	84
trnE-UUC	gene	translation-rna	−	31328	31401	73
trnT-GGU	gene	translation-rna	+	31984	32056	72
psbD	gene	photosystem-ii	+	33349	34411	1062
psbC	gene	photosystem-ii	+	34358	35780	1422
trnS-UCA	gene	translation-rna	−	36017	36110	93
psbZ	gene	photosystem-ii	+	36429	36618	189
trnG-GCC	gene	translation-rna	+	36893	36964	71
trnfM-CAU	gene	translation-rna	−	37117	37191	74
rps14	gene	ribosomal-protein	−	37340	37643	303
psaB	gene	photosystem-i	−	37770	39975	2205
psaA	gene	photosystem-i	−	39999	42252	2253
ycf3	gene	other	−	42947	44859	1912
trnS-GGA	gene	translation-rna	+	45199	45286	87
rps4	gene	ribosomal-protein	−	45569	46175	606
trnT-UGU	gene	translation-rna	−	46514	46587	73
trnL-UAA	gene	translation-rna	+	47218	47784	566
trnF-GAA	gene	translation-rna	+	48079	48152	73
ndhJ	gene	nad-dehydrogenase	−	48803	49280	477
ndhK	gene	nad-dehydrogenase	−	49387	50065	678
ndhC	gene	nad-dehydrogenase	−	50117	50480	363
trnV-UAC	gene	translation-rna	−	51481	52134	653
trnM-CAU	gene	translation-rna	+	52314	52387	73
atpE	gene	atp-synthase	−	52597	52999	402
atpB	gene	atp-synthase	−	52995	54492	1497
rbcL	gene	other	+	55258	56701	1443
accD	gene	other	+	57420	58893	1473
psaI	gene	photosystem-i	+	59587	59698	111
ycf4	gene	other	+	60124	60679	555
cemA	gene	other	+	61359	62019	660
petA	gene	cytochrome	+	62225	63188	963
pabJ	gene	other	−	64230	64353	123
psbL	gene	photosystem-ii	−	64487	64604	117
psbF	gene	photosystem-ii	−	64627	64747	120
psbE	gene	photosystem-ii	−	64761	65013	252
petL	gene	cytochrome	+	65920	66016	96
petG	gene	cytochrome	+	66191	66305	114
trnW-CCA	gene	translation-rna	−	66423	66497	74
trnP-UGG	gene	translation-rna	−	66660	66734	74
psbJ	gene	photosystem-ii	+	67002	67137	135
rpl33	gene	ribosomal-protein	+	67608	67809	201
rps18	gene	ribosomal-protein	+	67982	68288	306
rpl20	gene	ribosomal-protein	−	68523	68910	387
rps12	gene	ribosomal-protein	−	69695	97798	28103
rps12	gene	ribosomal-protein	+	69695	138307	68612
clpP	gene	other	−	69962	71892	1930
psbB	gene	photosystem-ii	+	72343	73870	1527
psbT	gene	photosystem-ii	+	74061	74163	102
psbN	gene	photosystem-ii	−	74236	74368	132
psbH	gene	photosystem-ii	+	74471	74693	222
petB	gene	cytochrome	+	74817	76188	1371
petD	gene	cytochrome	+	76376	77582	1206
rpoA	gene	rna-polymerase	−	77744	78758	1014
rps11	gene	ribosomal-protein	−	78829	79246	417
rpl36	gene	ribosomal-protein	−	79347	79461	114
infA	gene	other	−	79556	79790	234
rps8	gene	ribosomal-protein	−	79910	80321	411
rpl14	gene	ribosomal-protein	−	80479	80848	369
rpl16	gene	ribosomal-protein	−	80974	82218	1244
rps3	gene	ribosomal-protein	−	82372	83035	663
rpl22	gene	ribosomal-protein	−	83036	83492	456
rps19	gene	ribosomal-protein	−	83556	83835	279
rpl2	gene	ribosomal-protein	−	83891	85374	1483
rpl23	gene	ribosomal-protein	−	85392	85674	282
trnI-CAU	gene	translation-rna	−	85833	85907	74
ycf2	gene	other	+	85995	92787	6792
ycf15	gene	other	+	92928	93126	198
trnL-CAA	gene	translation-rna	−	93386	93467	81
ndhB	gene	nad-dehydrogenase	−	94009	96212	2203
rps7	gene	ribosomal-protein	−	96486	96954	468
trnV-GAC	gene	translation-rna	+	99367	99439	72
rrn16	gene	ribosomal-rna	+	99666	101157	1491
trnI-GAU	gene	translation-rna	+	101455	102475	1020
trnA-UGC	gene	translation-rna	+	102540	103427	887
rrn23	gene	ribosomal-rna	+	103589	106402	2813
rrn4.5	gene	ribosomal-rna	+	106500	106603	103
rrn5	gene	ribosomal-rna	+	106850	106971	121
trnR-ACG	gene	translation-rna	+	107195	107269	74
trnN-GUU	gene	translation-rna	+	107816	107888	72
ndhF	gene	nad-dehydrogenase	−	108964	111205	2241
rpl32	gene	ribosomal-protein	+	111727	111904	177
trnL-UAG	gene	translation-rna	+	112337	112417	80
ccsA	gene	other	+	112510	113485	975
ndhD	gene	nad-dehydrogenase	−	113719	115240	1521
psaC	gene	photosystem-i	−	115348	115594	246
ndhE	gene	nad-dehydrogenase	−	115845	116151	306
ndhG	gene	nad-dehydrogenase	−	116381	116912	531
ndhI	gene	nad-dehydrogenase	−	117276	117777	501
ndhA	gene	nad-dehydrogenase	−	117857	119955	2098
ndhH	gene	nad-dehydrogenase	−	119956	121138	1182
rps15	gene	ribosomal-protein	−	121234	121507	273
ycf1	gene	other	−	121781	127097	5316
trnN-GUU	gene	translation-rna	+	127426	127498	72
trnR-ACG	gene	translation-rna	−	128045	128119	74
rrn5	gene	ribosomal-rna	−	128343	128464	121
rrn4.5	gene	ribosomal-rna	−	128711	128814	103
rrn23	gene	ribosomal-rna	−	128912	131725	2813
trnA-UGC	gene	translation-rna	−	131887	132774	887
trnI-GAU	gene	translation-rna	−	132839	133859	1020
rrn16	gene	ribosomal-rna	−	134157	135648	1491
trnV-GAC	gene	translation-rna	−	135875	135947	72
rps7	gene	ribosomal-protein	+	138360	138828	468
ndhB	gene	nad-dehydrogenase	+	139102	141305	2203
trnL-CAA	gene	translation-rna	+	141847	141928	81
ycf15	gene	other	−	142188	142386	198
ycf2	gene	other	−	142527	149319	6792
trnI-CAU	gene	translation-rna	+	149407	149481	74
rpl23	gene	ribosomal-protein	+	149640	149922	282
rpl2	gene	ribosomal-protein	+	149940	151423	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420957.1DNA · accDMW420957DNA · atpBMW420957DNA · matKMW420957DNA · ndhFMW420957DNA · psbAMW420957DNA · rbcLMW420957DNA · rps12MW420957DNA · ycf1MW420957