Coordinate-aware organelle record

Scutellaria altissima chloroplast genome

Available PQ059199.1 151,998 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	4	78	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1677	4272	2595
matK	gene	other	−	1966	3511	1545
rps16	gene	ribosomal-protein	−	5176	6364	1188
trnQ-UUG	gene	translation-rna	−	7475	7547	72
psbK	gene	photosystem-ii	+	7871	8057	186
psbI	gene	photosystem-ii	+	8447	8558	111
trnS-GCU	gene	translation-rna	−	8656	8744	88
trnG-UCC	gene	translation-rna	+	9436	10191	755
trnR-UCU	gene	translation-rna	+	10356	10428	72
atpA	gene	atp-synthase	−	10524	12048	1524
atpF	gene	atp-synthase	−	12125	13353	1228
atpH	gene	atp-synthase	−	13727	13973	246
atpI	gene	atp-synthase	−	14966	15710	744
rps2	gene	ribosomal-protein	−	16057	16894	837
rpoC2	gene	rna-polymerase	−	16988	21188	4200
rpoC1	gene	rna-polymerase	−	21342	24175	2833
rpoB	gene	rna-polymerase	−	24201	27414	3213
trnC-GCA	gene	translation-rna	+	28580	28651	71
petN	gene	cytochrome	+	29386	29476	90
psbM	gene	photosystem-ii	−	30462	30576	114
trnD-GUC	gene	translation-rna	−	31101	31175	74
trnY-GUA	gene	translation-rna	−	31288	31372	84
trnE-UUC	gene	translation-rna	−	31431	31504	73
trnT-GGU	gene	translation-rna	+	32075	32147	72
psbD	gene	photosystem-ii	+	33455	34517	1062
psbC	gene	photosystem-ii	+	34464	35886	1422
trnS-UGA	gene	translation-rna	−	36120	36212	92
psbZ	gene	photosystem-ii	+	36531	36720	189
trnG-GCC	gene	translation-rna	+	36991	37062	71
trnfM-CAU	gene	translation-rna	−	37206	37280	74
rps14	gene	ribosomal-protein	−	37429	37732	303
psaB	gene	photosystem-i	−	37863	40068	2205
psaA	gene	photosystem-i	−	40093	42346	2253
ycf3	gene	other	−	43044	44966	1922
trnS-GGA	gene	translation-rna	+	45848	45935	87
rps4	gene	ribosomal-protein	−	46217	46823	606
trnT-UGU	gene	translation-rna	−	47164	47237	73
trnL-UAA	gene	translation-rna	+	47912	48479	567
trnF-GAA	gene	translation-rna	+	48777	48850	73
ndhJ	gene	nad-dehydrogenase	−	49499	49976	477
ndhK	gene	nad-dehydrogenase	−	50084	50762	678
ndhC	gene	nad-dehydrogenase	−	50814	51177	363
trnV-UAC	gene	translation-rna	−	52165	52824	659
trnM-CAU	gene	translation-rna	+	53004	53077	73
atpE	gene	atp-synthase	−	53285	53687	402
atpB	gene	atp-synthase	−	53683	55180	1497
rbcL	gene	other	+	55927	57391	1464
accD	gene	other	+	58126	59617	1491
psaI	gene	photosystem-i	+	59854	59965	111
ycf4	gene	other	+	60398	60953	555
cemA	gene	other	+	61576	62176	600
petA	gene	cytochrome	+	62382	63345	963
psbJ	gene	photosystem-ii	−	64376	64499	123
psbL	gene	photosystem-ii	−	64632	64749	117
psbF	gene	photosystem-ii	−	64772	64892	120
psbE	gene	photosystem-ii	−	64906	65158	252
petL	gene	cytochrome	+	66074	66170	96
petG	gene	cytochrome	+	66345	66459	114
trnW-CCA	gene	translation-rna	−	66567	66641	74
trnP-UGG	gene	translation-rna	−	66810	66884	74
psaJ	gene	photosystem-i	+	67156	67291	135
rpl33	gene	ribosomal-protein	+	67771	67972	201
rps18	gene	ribosomal-protein	+	68145	68451	306
rpl20	gene	ribosomal-protein	−	68691	69078	387
rps12	gene	ribosomal-protein	−	69858	97970	28112
rps12	gene	ribosomal-protein	+	69858	138759	68901
clpP	gene	other	−	70123	72059	1936
psbB	gene	photosystem-ii	+	72512	74039	1527
psbT	gene	photosystem-ii	+	74218	74326	108
psbN	gene	photosystem-ii	−	74386	74518	132
psbH	gene	photosystem-ii	+	74621	74843	222
petB	gene	cytochrome	+	74967	76336	1369
petD	gene	cytochrome	+	76524	77736	1212
rpoA	gene	rna-polymerase	−	77898	78912	1014
rps11	gene	ribosomal-protein	−	78983	79400	417
rpl36	gene	ribosomal-protein	−	79501	79615	114
infA	gene	other	−	79710	79944	234
rps8	gene	ribosomal-protein	−	80066	80477	411
rpl14	gene	ribosomal-protein	−	80643	81012	369
rpl16	gene	ribosomal-protein	−	81138	82369	1231
rps3	gene	ribosomal-protein	−	82523	83186	663
rpl22	gene	ribosomal-protein	−	83187	83643	456
rps19	gene	ribosomal-protein	−	83702	83981	279
rpl2	gene	ribosomal-protein	−	84036	85519	1483
rpl23	gene	ribosomal-protein	−	85537	85819	282
trnI-CAU	gene	translation-rna	−	85978	86052	74
ycf2	gene	other	+	86140	92950	6810
ycf15	gene	other	+	93091	93289	198
trnL-CAA	gene	translation-rna	−	93549	93630	81
ndhB	gene	nad-dehydrogenase	−	94172	96330	2158
rps7	gene	ribosomal-protein	−	96658	97126	468
trnV-GAC	gene	translation-rna	+	99542	99614	72
rrn16	gene	ribosomal-rna	+	99836	101327	1491
trnI-GAU	gene	translation-rna	+	101625	102645	1020
trnA-UGC	gene	translation-rna	+	102709	103597	888
rrn23	gene	ribosomal-rna	+	103766	106578	2812
rrn4.5	gene	ribosomal-rna	+	106676	106779	103
rrn5	gene	ribosomal-rna	+	107026	107147	121
trnR-ACG	gene	translation-rna	+	107381	107455	74
trnN-GUU	gene	translation-rna	−	108010	108082	72
ndhF	gene	nad-dehydrogenase	−	109158	111399	2241
rpl32	gene	ribosomal-protein	+	111909	112086	177
trnL-UAG	gene	translation-rna	+	112520	112600	80
ccsA	gene	other	+	112599	113685	1086
ndhD	gene	nad-dehydrogenase	−	113922	115452	1530
psaC	gene	photosystem-i	−	115559	115805	246
ndhE	gene	nad-dehydrogenase	−	116060	116366	306
ndhG	gene	nad-dehydrogenase	−	116589	117120	531
ndhI	gene	nad-dehydrogenase	−	117469	117970	501
ndhA	gene	nad-dehydrogenase	−	118050	120159	2109
ndhH	gene	nad-dehydrogenase	−	120160	121342	1182
rps15	gene	ribosomal-protein	−	121438	121711	273
ycf1	gene	other	−	121977	127638	5661
trnN-GUU	gene	translation-rna	+	127856	127928	72
trnR-ACG	gene	translation-rna	−	128483	128557	74
rrn5	gene	ribosomal-rna	−	128791	128912	121
rrn4.5	gene	ribosomal-rna	−	129159	129262	103
rrn23	gene	ribosomal-rna	−	129360	132172	2812
trnA-UGC	gene	translation-rna	−	132341	133229	888
trnI-GAU	gene	translation-rna	−	133293	134313	1020
ycf68	gene	other	−	133864	134158	294
rrn16	gene	ribosomal-rna	−	134611	136102	1491
trnV-GAC	gene	translation-rna	−	136324	136396	72
rps7	gene	ribosomal-protein	+	138812	139280	468
ndhB	gene	nad-dehydrogenase	+	139608	141766	2158
trnL-CAA	gene	translation-rna	+	142308	142389	81
ycf15	gene	other	−	142649	142847	198
ycf2	gene	other	−	142988	149798	6810
trnI-CAU	gene	translation-rna	+	149886	149960	74
rpl23	gene	ribosomal-protein	+	150119	150401	282
rpl2	gene	ribosomal-protein	+	150419	151902	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059199.1DNA · accDPQ059199DNA · atpBPQ059199DNA · matKPQ059199DNA · ndhFPQ059199DNA · psbAPQ059199DNA · rbcLPQ059199DNA · rps12PQ059199DNA · ycf1PQ059199