Coordinate-aware organelle record

Scutellaria amabilis chloroplast genome

Available PQ075894.1 151,879 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1677	4258	2581
matK	gene	other	−	1964	3500	1536
rps16	gene	ribosomal-protein	−	5130	6295	1165
trnQ-UUG	gene	translation-rna	−	7314	7386	72
psbK	gene	photosystem-ii	+	7710	7896	186
psbI	gene	photosystem-ii	+	8287	8398	111
trnS-GCU	gene	translation-rna	−	8516	8604	88
trnG-UCC	gene	translation-rna	+	9165	9926	761
trnR-UCU	gene	translation-rna	+	10096	10168	72
atpA	gene	atp-synthase	−	10264	11788	1524
atpF	gene	atp-synthase	−	11870	13098	1228
atpH	gene	atp-synthase	−	13455	13701	246
atpI	gene	atp-synthase	−	14695	15439	744
rps2	gene	ribosomal-protein	−	15786	16497	711
rpoC2	gene	rna-polymerase	−	16713	20895	4182
rpoC1	gene	rna-polymerase	−	21049	23880	2831
rpoB	gene	rna-polymerase	−	23906	27119	3213
trnC-GCA	gene	translation-rna	+	28286	28357	71
petN	gene	cytochrome	+	29068	29158	90
psbM	gene	photosystem-ii	−	30189	30294	105
trnD-GUC	gene	translation-rna	−	30820	30894	74
trnY-GUA	gene	translation-rna	−	31007	31091	84
trnE-UUC	gene	translation-rna	−	31150	31223	73
trnT-GGU	gene	translation-rna	+	31798	31870	72
psbD	gene	photosystem-ii	+	33172	34234	1062
psbC	gene	photosystem-ii	+	34181	35603	1422
trnS-UGA	gene	translation-rna	−	35839	35931	92
psbZ	gene	photosystem-ii	+	36251	36440	189
trnG-GCC	gene	translation-rna	+	36711	36782	71
trnfM-CAU	gene	translation-rna	−	36934	37008	74
rps14	gene	ribosomal-protein	−	37157	37460	303
psaB	gene	photosystem-i	−	37587	39792	2205
psaA	gene	photosystem-i	−	39817	42070	2253
ycf3	gene	other	−	42740	44663	1923
trnS-GGA	gene	translation-rna	+	45537	45624	87
rps4	gene	ribosomal-protein	−	45901	46507	606
trnT-UGU	gene	translation-rna	−	46848	46921	73
trnL-UAA	gene	translation-rna	+	47605	48166	561
trnF-GAA	gene	translation-rna	+	48466	48539	73
ndhJ	gene	nad-dehydrogenase	−	49187	49664	477
ndhK	gene	nad-dehydrogenase	−	49771	50449	678
ndhC	gene	nad-dehydrogenase	−	50501	50864	363
trnV-UAC	gene	translation-rna	−	51703	52356	653
trnM-CAU	gene	translation-rna	+	52536	52609	73
atpE	gene	atp-synthase	−	52824	53226	402
atpB	gene	atp-synthase	−	53222	54710	1488
rbcL	gene	other	+	55465	56926	1461
accD	gene	other	+	57648	59115	1467
psaI	gene	photosystem-i	+	59672	59783	111
ycf4	gene	other	+	60216	60771	555
cemA	gene	other	+	61508	62108	600
petA	gene	cytochrome	+	62314	63277	963
psbJ	gene	photosystem-ii	−	64309	64432	123
psbL	gene	photosystem-ii	−	64565	64787	222
psbF	gene	photosystem-ii	−	64705	64825	120
psbE	gene	photosystem-ii	−	64839	65091	252
petL	gene	cytochrome	+	66000	66096	96
petG	gene	cytochrome	+	66270	66384	114
trnW-CCA	gene	translation-rna	−	66502	66576	74
trnP-UGG	gene	translation-rna	−	66745	66819	74
psaJ	gene	photosystem-i	+	67091	67226	135
rpl33	gene	ribosomal-protein	+	67699	67900	201
rps18	gene	ribosomal-protein	+	68074	68380	306
rpl20	gene	ribosomal-protein	−	68616	69003	387
rps12	gene	ribosomal-protein	−	69791	97908	28117
rps12	gene	ribosomal-protein	+	69791	138647	68856
clpP	gene	other	−	70059	71983	1924
psbB	gene	photosystem-ii	+	72449	73976	1527
psbT	gene	photosystem-ii	+	74167	74269	102
psbN	gene	photosystem-ii	−	74342	74474	132
psbH	gene	photosystem-ii	+	74577	74799	222
petB	gene	cytochrome	+	74923	76292	1369
petD	gene	cytochrome	+	76480	77682	1202
rpoA	gene	rna-polymerase	−	77844	78858	1014
rps11	gene	ribosomal-protein	−	78929	79346	417
rpl36	gene	ribosomal-protein	−	79447	79561	114
infA	gene	other	−	79656	79890	234
rps8	gene	ribosomal-protein	−	80009	80420	411
rpl14	gene	ribosomal-protein	−	80590	80959	369
rpl16	gene	ribosomal-protein	−	81085	82312	1227
rps3	gene	ribosomal-protein	−	82467	83130	663
rpl22	gene	ribosomal-protein	−	83131	83587	456
rps19	gene	ribosomal-protein	−	83646	83925	279
rpl2	gene	ribosomal-protein	−	83979	85462	1483
rpl23	gene	ribosomal-protein	−	85480	85762	282
trnI-CAU	gene	translation-rna	−	85921	85995	74
ycf2	gene	other	+	86083	92893	6810
ycf15	gene	other	+	93034	93232	198
trnL-CAA	gene	translation-rna	−	93487	93568	81
ndhB	gene	nad-dehydrogenase	−	94110	96322	2212
rps7	gene	ribosomal-protein	−	96596	97064	468
trnV-GAC	gene	translation-rna	+	99476	99548	72
rrn16	gene	ribosomal-rna	+	99775	101266	1491
trnI-GAU	gene	translation-rna	+	101564	102585	1021
trnA-UGC	gene	translation-rna	+	102649	103532	883
rrn23	gene	ribosomal-rna	+	103701	106514	2813
rrn4.5	gene	ribosomal-rna	+	106612	106715	103
rrn5	gene	ribosomal-rna	+	106962	107083	121
trnR-ACG	gene	translation-rna	+	107317	107391	74
trnN-GUU	gene	translation-rna	−	107937	108009	72
ndhF	gene	nad-dehydrogenase	−	109085	111326	2241
rpl32	gene	ribosomal-protein	+	111846	112023	177
trnL-UAG	gene	translation-rna	+	112467	112547	80
ccsA	gene	other	+	112644	113619	975
ndhD	gene	nad-dehydrogenase	−	113851	115375	1524
psaC	gene	photosystem-i	−	115472	115718	246
ndhE	gene	nad-dehydrogenase	−	115974	116280	306
ndhG	gene	nad-dehydrogenase	−	116500	117031	531
ndhI	gene	nad-dehydrogenase	−	117395	117896	501
ndhA	gene	nad-dehydrogenase	−	117976	120067	2091
ndhH	gene	nad-dehydrogenase	−	120068	121280	1212
rps15	gene	ribosomal-protein	−	121352	121625	273
ycf1	gene	other	−	121891	127537	5646
trnN-GUU	gene	translation-rna	+	127755	127827	72
trnR-ACG	gene	translation-rna	−	128373	128447	74
rrn5	gene	ribosomal-rna	−	128681	128802	121
rrn4.5	gene	ribosomal-rna	−	129049	129152	103
rrn23	gene	ribosomal-rna	−	129250	132063	2813
trnA-UGC	gene	translation-rna	−	132232	133115	883
trnI-GAU	gene	translation-rna	−	133179	134200	1021
ycf68	gene	other	−	133805	134045	240
rrn16	gene	ribosomal-rna	−	134498	135989	1491
trnV-GAC	gene	translation-rna	−	136216	136288	72
rps7	gene	ribosomal-protein	+	138700	139168	468
ndhB	gene	nad-dehydrogenase	+	139442	141654	2212
trnL-CAA	gene	translation-rna	+	142196	142277	81
ycf15	gene	other	−	142532	142730	198
ycf2	gene	other	−	142871	149681	6810
trnI-CAU	gene	translation-rna	+	149769	149843	74
rpl23	gene	ribosomal-protein	+	150002	150284	282
rpl2	gene	ribosomal-protein	+	150302	151785	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075894.1DNA · accDPQ075894DNA · atpBPQ075894DNA · matKPQ075894DNA · ndhFPQ075894DNA · psbAPQ075894DNA · rbcLPQ075894DNA · rps12PQ075894DNA · ycf1PQ075894