LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Scutellaria amoena chloroplast dna

Available NC_057255.1 151,569 bp 130 genes
DNA resources Accession record
Scutellaria amoena chloroplast Biopython GenomeDiagram 1.79; GenBank local location segments. IR IR trnH-GUG · NC_057255.1 · 1–73 bp · − trnH-GUG · NC_057255.1 · 151,569–151,569 bp · − psbA · NC_057255.1 · 376–1,434 bp · − trnK-UUU · NC_057255.1 · 1,676–4,262 bp · − matK · NC_057255.1 · 1,966–3,501 bp · − rps16 · NC_057255.1 · 5,156–6,326 bp · − trnQ-UUG · NC_057255.1 · 7,402–7,473 bp · − trnS-GCU · NC_057255.1 · 8,595–8,682 bp · − atpA · NC_057255.1 · 10,406–11,929 bp · − atpF · NC_057255.1 · 12,012–13,240 bp · − atpH · NC_057255.1 · 13,611–13,856 bp · − atpI · NC_057255.1 · 14,845–15,588 bp · − rps2 · NC_057255.1 · 15,942–16,652 bp · − rpoC2 · NC_057255.1 · 16,866–21,071 bp · − rpoC1 · NC_057255.1 · 21,226–24,049 bp · − rpoB · NC_057255.1 · 24,076–27,288 bp · − psbM · NC_057255.1 · 29,902–30,006 bp · − trnD-GUC · NC_057255.1 · 30,533–30,606 bp · − trnY-GUA · NC_057255.1 · 30,725–30,808 bp · − trnS-UGA · NC_057255.1 · 35,416–35,507 bp · − trnfM-CAU · NC_057255.1 · 36,502–36,575 bp · − rps14 · NC_057255.1 · 36,730–37,032 bp · − psaB · NC_057255.1 · 37,160–39,364 bp · − psaA · NC_057255.1 · 39,390–41,642 bp · − ycf3 · NC_057255.1 · 42,330–44,254 bp · − rps4 · NC_057255.1 · 45,514–46,119 bp · − trnT-UGU · NC_057255.1 · 46,460–46,532 bp · − ndhJ · NC_057255.1 · 48,830–49,306 bp · − ndhK · NC_057255.1 · 49,415–50,092 bp · − ndhC · NC_057255.1 · 50,145–50,507 bp · − trnV-UAC · NC_057255.1 · 51,483–52,135 bp · − atpE · NC_057255.1 · 52,612–53,013 bp · − atpB · NC_057255.1 · 53,010–54,506 bp · − psbJ · NC_057255.1 · 64,235–64,357 bp · − psbL · NC_057255.1 · 64,491–64,607 bp · − psbF · NC_057255.1 · 64,631–64,750 bp · − psbE · NC_057255.1 · 64,765–65,016 bp · − trnW-CCA · NC_057255.1 · 66,397–66,470 bp · − trnP-UGG · NC_057255.1 · 66,640–66,713 bp · − rpl20 · NC_057255.1 · 68,507–68,893 bp · − rps12 · NC_057255.1 · 69,679–69,804 bp · − rps12 · NC_057255.1 · 96,981–97,771 bp · − clpP · NC_057255.1 · 69,939–71,877 bp · − psbN · NC_057255.1 · 74,221–74,352 bp · − rpoA · NC_057255.1 · 77,872–78,723 bp · − rps11 · NC_057255.1 · 78,795–79,211 bp · − rpl36 · NC_057255.1 · 79,313–79,426 bp · − infA · NC_057255.1 · 79,521–79,754 bp · − rps8 · NC_057255.1 · 79,879–80,289 bp · − rpl14 · NC_057255.1 · 80,451–80,819 bp · − rpl16 · NC_057255.1 · 80,946–82,177 bp · − rps3 · NC_057255.1 · 82,334–83,002 bp · − rpl22 · NC_057255.1 · 83,004–83,459 bp · − rps19 · NC_057255.1 · 83,519–83,797 bp · − rpl2 · NC_057255.1 · 83,852–85,333 bp · − rpl23 · NC_057255.1 · 85,352–85,633 bp · − trnI-CAU · NC_057255.1 · 85,793–85,866 bp · − trnL-CAA · NC_057255.1 · 93,351–93,431 bp · − ndhB · NC_057255.1 · 93,974–96,185 bp · − rps7 · NC_057255.1 · 96,460–96,927 bp · − trnN-GUU · NC_057255.1 · 107,819–107,890 bp · − ndhF · NC_057255.1 · 108,967–111,201 bp · − psaC · NC_057255.1 · 115,185–115,430 bp · − ndhE · NC_057255.1 · 115,686–115,991 bp · − ndhG · NC_057255.1 · 116,214–116,744 bp · − ndhI · NC_057255.1 · 117,040–117,606 bp · − ndhA · NC_057255.1 · 117,687–119,794 bp · − ndhH · NC_057255.1 · 119,796–121,007 bp · − rps15 · NC_057255.1 · 121,074–121,346 bp · − ycf1 · NC_057255.1 · 121,543–127,089 bp · − trnR-ACG · NC_057255.1 · 128,047–128,120 bp · − rrn5 · NC_057255.1 · 128,355–128,475 bp · − rrn4.5 · NC_057255.1 · 128,723–128,825 bp · − rrn23 · NC_057255.1 · 128,924–131,735 bp · − trnA-UGC · NC_057255.1 · 131,905–132,794 bp · − trnI-GAU · NC_057255.1 · 132,859–133,879 bp · − rrn16 · NC_057255.1 · 134,178–135,668 bp · − trnV-GAC · NC_057255.1 · 135,895–135,966 bp · − ycf15 · NC_057255.1 · 142,218–142,466 bp · − ycf2 · NC_057255.1 · 142,557–149,354 bp · − psbK · NC_057255.1 · 7,798–7,983 bp · + psbI · NC_057255.1 · 8,372–8,482 bp · + trnG-UCC · NC_057255.1 · 9,309–10,063 bp · + trnR-UCU · NC_057255.1 · 10,238–10,309 bp · + trnC-GCA · NC_057255.1 · 28,443–28,513 bp · + petN · NC_057255.1 · 28,796–28,885 bp · + trnT-GGU · NC_057255.1 · 31,516–31,587 bp · + psbD · NC_057255.1 · 32,749–33,810 bp · + psbC · NC_057255.1 · 33,758–35,179 bp · + psbZ · NC_057255.1 · 35,823–36,011 bp · + trnG-GCC · NC_057255.1 · 36,286–36,356 bp · + trnS-GGA · NC_057255.1 · 45,146–45,232 bp · + trnL-UAA · NC_057255.1 · 47,236–47,802 bp · + trnF-GAA · NC_057255.1 · 48,110–48,182 bp · + trnM-CAU · NC_057255.1 · 52,331–52,403 bp · + rbcL · NC_057255.1 · 55,270–56,712 bp · + accD · NC_057255.1 · 57,430–58,908 bp · + psaI · NC_057255.1 · 59,621–59,731 bp · + ycf4 · NC_057255.1 · 60,165–60,719 bp · + cemA · NC_057255.1 · 61,463–62,062 bp · + petA · NC_057255.1 · 62,264–63,226 bp · + petL · NC_057255.1 · 65,895–65,990 bp · + petG · NC_057255.1 · 66,165–66,278 bp · + psaJ · NC_057255.1 · 66,984–67,118 bp · + rpl33 · NC_057255.1 · 67,593–67,793 bp · + rps18 · NC_057255.1 · 67,968–68,273 bp · + rps12 · NC_057255.1 · 137,538–138,328 bp · + psbB · NC_057255.1 · 72,335–73,861 bp · + psbT · NC_057255.1 · 74,053–74,160 bp · + psbH · NC_057255.1 · 74,456–74,677 bp · + petB · NC_057255.1 · 74,802–76,162 bp · + petD · NC_057255.1 · 76,351–77,547 bp · + ycf2 · NC_057255.1 · 85,955–92,752 bp · + ycf15 · NC_057255.1 · 92,843–93,091 bp · + trnV-GAC · NC_057255.1 · 99,343–99,414 bp · + rrn16 · NC_057255.1 · 99,641–101,131 bp · + trnI-GAU · NC_057255.1 · 101,430–102,450 bp · + trnA-UGC · NC_057255.1 · 102,515–103,404 bp · + rrn23 · NC_057255.1 · 103,574–106,385 bp · + rrn4.5 · NC_057255.1 · 106,484–106,586 bp · + rrn5 · NC_057255.1 · 106,834–106,954 bp · + trnR-ACG · NC_057255.1 · 107,189–107,262 bp · + rpl32 · NC_057255.1 · 111,715–111,891 bp · + trnL-UAG · NC_057255.1 · 112,177–112,256 bp · + ccsA · NC_057255.1 · 112,348–113,322 bp · + trnN-GUU · NC_057255.1 · 127,419–127,490 bp · + rps7 · NC_057255.1 · 138,382–138,849 bp · + ndhB · NC_057255.1 · 139,124–141,335 bp · + trnL-CAA · NC_057255.1 · 141,878–141,958 bp · + trnI-CAU · NC_057255.1 · 149,443–149,516 bp · + rpl23 · NC_057255.1 · 149,676–149,957 bp · + rpl2 · NC_057255.1 · 149,976–151,457 bp · + 0 kb 13 kb 26 kb 39 kb 52 kb 65 kb 78 kb 91 kb 104 kb 117 kb 130 kb 143 kb Scutellaria amoena ANNOTATED PLASTOME NC_057255.1 151,569 bp · 130 genes Gene function Transfer RNA Photosystem II Other Ribosomal protein ATP synthase RNA polymerase Cytochrome Photosystem I NADH dehydrogenase Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

132 local segments
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−17373
psbAgenephotosystem-ii−37614341059
trnK-UUUgenetranslation-rna−167642622587
matKgeneother−196635011536
rps16generibosomal-protein−515663261171
trnQ-UUGgenetranslation-rna−7402747372
psbKgenephotosystem-ii+77987983186
psbIgenephotosystem-ii+83728482111
trnS-GCUgenetranslation-rna−8595868288
trnG-UCCgenetranslation-rna+930910063755
trnR-UCUgenetranslation-rna+102381030972
atpAgeneatp-synthase−10406119291524
atpFgeneatp-synthase−12012132401229
atpHgeneatp-synthase−1361113856246
atpIgeneatp-synthase−1484515588744
rps2generibosomal-protein−1594216652711
rpoC2generna-polymerase−16866210714206
rpoC1generna-polymerase−21226240492824
rpoBgenerna-polymerase−24076272883213
trnC-GCAgenetranslation-rna+284432851371
petNgenecytochrome+287962888590
psbMgenephotosystem-ii−2990230006105
trnD-GUCgenetranslation-rna−305333060674
trnY-GUAgenetranslation-rna−307253080884
trnT-GGUgenetranslation-rna+315163158772
psbDgenephotosystem-ii+32749338101062
psbCgenephotosystem-ii+33758351791422
trnS-UGAgenetranslation-rna−354163550792
psbZgenephotosystem-ii+3582336011189
trnG-GCCgenetranslation-rna+362863635671
trnfM-CAUgenetranslation-rna−365023657574
rps14generibosomal-protein−3673037032303
psaBgenephotosystem-i−37160393642205
psaAgenephotosystem-i−39390416422253
ycf3geneother−42330442541925
trnS-GGAgenetranslation-rna+451464523287
rps4generibosomal-protein−4551446119606
trnT-UGUgenetranslation-rna−464604653273
trnL-UAAgenetranslation-rna+4723647802567
trnF-GAAgenetranslation-rna+481104818273
ndhJgenenad-dehydrogenase−4883049306477
ndhKgenenad-dehydrogenase−4941550092678
ndhCgenenad-dehydrogenase−5014550507363
trnV-UACgenetranslation-rna−5148352135653
trnM-CAUgenetranslation-rna+523315240373
atpEgeneatp-synthase−5261253013402
atpBgeneatp-synthase−53010545061497
rbcLgeneother+55270567121443
accDgeneother+57430589081479
psaIgenephotosystem-i+5962159731111
ycf4geneother+6016560719555
cemAgeneother+6146362062600
petAgenecytochrome+6226463226963
psbJgenephotosystem-ii−6423564357123
psbLgenephotosystem-ii−6449164607117
psbFgenephotosystem-ii−6463164750120
psbEgenephotosystem-ii−6476565016252
petLgenecytochrome+658956599096
petGgenecytochrome+6616566278114
trnW-CCAgenetranslation-rna−663976647074
trnP-UGGgenetranslation-rna−666406671374
psaJgenephotosystem-i+6698467118135
rpl33generibosomal-protein+6759367793201
rps18generibosomal-protein+6796868273306
rpl20generibosomal-protein−6850768893387
rps12generibosomal-protein−6967969804126
clpPgeneother−69939718771939
psbBgenephotosystem-ii+72335738611527
psbTgenephotosystem-ii+7405374160108
psbNgenephotosystem-ii−7422174352132
psbHgenephotosystem-ii+7445674677222
petBgenecytochrome+74802761621361
petDgenecytochrome+76351775471197
rpoAgenerna-polymerase−7787278723852
rps11generibosomal-protein−7879579211417
rpl36generibosomal-protein−7931379426114
infAgeneother−7952179754234
rps8generibosomal-protein−7987980289411
rpl14generibosomal-protein−8045180819369
rpl16generibosomal-protein−80946821771232
rps3generibosomal-protein−8233483002669
rpl22generibosomal-protein−8300483459456
rps19generibosomal-protein−8351983797279
rpl2generibosomal-protein−83852853331482
rpl23generibosomal-protein−8535285633282
trnI-CAUgenetranslation-rna−857938586674
ycf2geneother+85955927526798
ycf15geneother+9284393091249
trnL-CAAgenetranslation-rna−933519343181
ndhBgenenad-dehydrogenase−93974961852212
rps7generibosomal-protein−9646096927468
rps12generibosomal-protein−9698197771791
trnV-GACgenetranslation-rna+993439941472
rrn16generibosomal-rna+996411011311491
trnI-GAUgenetranslation-rna+1014301024501021
trnA-UGCgenetranslation-rna+102515103404890
rrn23generibosomal-rna+1035741063852812
rrn4.5generibosomal-rna+106484106586103
rrn5generibosomal-rna+106834106954121
trnR-ACGgenetranslation-rna+10718910726274
trnN-GUUgenetranslation-rna−10781910789072
ndhFgenenad-dehydrogenase−1089671112012235
rpl32generibosomal-protein+111715111891177
trnL-UAGgenetranslation-rna+11217711225680
ccsAgeneother+112348113322975
psaCgenephotosystem-i−115185115430246
ndhEgenenad-dehydrogenase−115686115991306
ndhGgenenad-dehydrogenase−116214116744531
ndhIgenenad-dehydrogenase−117040117606567
ndhAgenenad-dehydrogenase−1176871197942108
ndhHgenenad-dehydrogenase−1197961210071212
rps15generibosomal-protein−121074121346273
ycf1geneother−1215431270895547
trnN-GUUgenetranslation-rna+12741912749072
trnR-ACGgenetranslation-rna−12804712812074
rrn5generibosomal-rna−128355128475121
rrn4.5generibosomal-rna−128723128825103
rrn23generibosomal-rna−1289241317352812
trnA-UGCgenetranslation-rna−131905132794890
trnI-GAUgenetranslation-rna−1328591338791021
rrn16generibosomal-rna−1341781356681491
trnV-GACgenetranslation-rna−13589513596672
rps12generibosomal-protein+137538138328791
rps7generibosomal-protein+138382138849468
ndhBgenenad-dehydrogenase+1391241413352212
trnL-CAAgenetranslation-rna+14187814195881
ycf15geneother−142218142466249
ycf2geneother−1425571493546798
trnI-CAUgenetranslation-rna+14944314951674
rpl23generibosomal-protein+149676149957282
rpl2generibosomal-protein+1499761514571482
trnH-GUGgenetranslation-rna−1515691515691

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Chloroplast DNANC_057255.1DNA · accDNC_057255DNA · atpBNC_057255DNA · matKNC_057255DNA · ndhFNC_057255DNA · psbANC_057255DNA · rbcLNC_057255DNA · rps12NC_057255DNA · ycf1NC_057255