Coordinate-aware organelle record

Scutellaria amoena chloroplast genome

Available NC_057255.1 151,569 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	151569	151569
psbA	gene	photosystem-ii	−	375	1434	1059
trnK-UUU	gene	translation-rna	−	1675	4262	2587
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5155	6326	1171
trnQ-UUG	gene	translation-rna	−	7401	7473	72
psbK	gene	photosystem-ii	+	7797	7983	186
psbI	gene	photosystem-ii	+	8371	8482	111
trnS-GCU	gene	translation-rna	−	8594	8682	88
trnG-UCC	gene	translation-rna	+	9308	10063	755
trnR-UCU	gene	translation-rna	+	10237	10309	72
atpA	gene	atp-synthase	−	10405	11929	1524
atpF	gene	atp-synthase	−	12011	13240	1229
atpH	gene	atp-synthase	−	13610	13856	246
atpI	gene	atp-synthase	−	14844	15588	744
rps2	gene	ribosomal-protein	−	15941	16652	711
rpoC2	gene	rna-polymerase	−	16865	21071	4206
rpoC1	gene	rna-polymerase	−	21225	24049	2824
rpoB	gene	rna-polymerase	−	24075	27288	3213
trnC-GCA	gene	translation-rna	+	28442	28513	71
petN	gene	cytochrome	+	28795	28885	90
psbM	gene	photosystem-ii	−	29901	30006	105
trnD-GUC	gene	translation-rna	−	30532	30606	74
trnY-GUA	gene	translation-rna	−	30724	30808	84
trnT-GGU	gene	translation-rna	+	31515	31587	72
psbD	gene	photosystem-ii	+	32748	33810	1062
psbC	gene	photosystem-ii	+	33757	35179	1422
trnS-UGA	gene	translation-rna	−	35415	35507	92
psbZ	gene	photosystem-ii	+	35822	36011	189
trnG-GCC	gene	translation-rna	+	36285	36356	71
trnfM-CAU	gene	translation-rna	−	36501	36575	74
rps14	gene	ribosomal-protein	−	36729	37032	303
psaB	gene	photosystem-i	−	37159	39364	2205
psaA	gene	photosystem-i	−	39389	41642	2253
ycf3	gene	other	−	42329	44254	1925
trnS-GGA	gene	translation-rna	+	45145	45232	87
rps4	gene	ribosomal-protein	−	45513	46119	606
trnT-UGU	gene	translation-rna	−	46459	46532	73
trnL-UAA	gene	translation-rna	+	47235	47802	567
trnF-GAA	gene	translation-rna	+	48109	48182	73
ndhJ	gene	nad-dehydrogenase	−	48829	49306	477
ndhK	gene	nad-dehydrogenase	−	49414	50092	678
ndhC	gene	nad-dehydrogenase	−	50144	50507	363
trnV-UAC	gene	translation-rna	−	51482	52135	653
trnM-CAU	gene	translation-rna	+	52330	52403	73
atpE	gene	atp-synthase	−	52611	53013	402
atpB	gene	atp-synthase	−	53009	54506	1497
rbcL	gene	other	+	55269	56712	1443
accD	gene	other	+	57429	58908	1479
psaI	gene	photosystem-i	+	59620	59731	111
ycf4	gene	other	+	60164	60719	555
cemA	gene	other	+	61462	62062	600
petA	gene	cytochrome	+	62263	63226	963
psbJ	gene	photosystem-ii	−	64234	64357	123
psbL	gene	photosystem-ii	−	64490	64607	117
psbF	gene	photosystem-ii	−	64630	64750	120
psbE	gene	photosystem-ii	−	64764	65016	252
petL	gene	cytochrome	+	65894	65990	96
petG	gene	cytochrome	+	66164	66278	114
trnW-CCA	gene	translation-rna	−	66396	66470	74
trnP-UGG	gene	translation-rna	−	66639	66713	74
psaJ	gene	photosystem-i	+	66983	67118	135
rpl33	gene	ribosomal-protein	+	67592	67793	201
rps18	gene	ribosomal-protein	+	67967	68273	306
rpl20	gene	ribosomal-protein	−	68506	68893	387
rps12	gene	ribosomal-protein	−	69678	97771	28093
rps12	gene	ribosomal-protein	+	69678	138328	68650
clpP	gene	other	−	69938	71877	1939
psbB	gene	photosystem-ii	+	72334	73861	1527
psbT	gene	photosystem-ii	+	74052	74160	108
psbN	gene	photosystem-ii	−	74220	74352	132
psbH	gene	photosystem-ii	+	74455	74677	222
petB	gene	cytochrome	+	74801	76162	1361
petD	gene	cytochrome	+	76350	77547	1197
rpoA	gene	rna-polymerase	−	77871	78723	852
rps11	gene	ribosomal-protein	−	78794	79211	417
rpl36	gene	ribosomal-protein	−	79312	79426	114
infA	gene	other	−	79520	79754	234
rps8	gene	ribosomal-protein	−	79878	80289	411
rpl14	gene	ribosomal-protein	−	80450	80819	369
rpl16	gene	ribosomal-protein	−	80945	82177	1232
rps3	gene	ribosomal-protein	−	82333	83002	669
rpl22	gene	ribosomal-protein	−	83003	83459	456
rps19	gene	ribosomal-protein	−	83518	83797	279
rpl2	gene	ribosomal-protein	−	83851	85333	1482
rpl23	gene	ribosomal-protein	−	85351	85633	282
trnI-CAU	gene	translation-rna	−	85792	85866	74
ycf2	gene	other	+	85954	92752	6798
ycf15	gene	other	+	92842	93091	249
trnL-CAA	gene	translation-rna	−	93350	93431	81
ndhB	gene	nad-dehydrogenase	−	93973	96185	2212
rps7	gene	ribosomal-protein	−	96459	96927	468
trnV-GAC	gene	translation-rna	+	99342	99414	72
rrn16	gene	ribosomal-rna	+	99640	101131	1491
trnI-GAU	gene	translation-rna	+	101429	102450	1021
trnA-UGC	gene	translation-rna	+	102514	103404	890
rrn23	gene	ribosomal-rna	+	103573	106385	2812
rrn4.5	gene	ribosomal-rna	+	106483	106586	103
rrn5	gene	ribosomal-rna	+	106833	106954	121
trnR-ACG	gene	translation-rna	+	107188	107262	74
trnN-GUU	gene	translation-rna	−	107818	107890	72
ndhF	gene	nad-dehydrogenase	−	108966	111201	2235
rpl32	gene	ribosomal-protein	+	111714	111891	177
trnL-UAG	gene	translation-rna	+	112176	112256	80
ccsA	gene	other	+	112347	113322	975
psaC	gene	photosystem-i	−	115184	115430	246
ndhE	gene	nad-dehydrogenase	−	115685	115991	306
ndhG	gene	nad-dehydrogenase	−	116213	116744	531
ndhI	gene	nad-dehydrogenase	−	117039	117606	567
ndhA	gene	nad-dehydrogenase	−	117686	119794	2108
ndhH	gene	nad-dehydrogenase	−	119795	121007	1212
rps15	gene	ribosomal-protein	−	121073	121346	273
ycf1	gene	other	−	121542	127089	5547
trnN-GUU	gene	translation-rna	+	127418	127490	72
trnR-ACG	gene	translation-rna	−	128046	128120	74
rrn5	gene	ribosomal-rna	−	128354	128475	121
rrn4.5	gene	ribosomal-rna	−	128722	128825	103
rrn23	gene	ribosomal-rna	−	128923	131735	2812
trnA-UGC	gene	translation-rna	−	131904	132794	890
trnI-GAU	gene	translation-rna	−	132858	133879	1021
rrn16	gene	ribosomal-rna	−	134177	135668	1491
trnV-GAC	gene	translation-rna	−	135894	135966	72
rps7	gene	ribosomal-protein	+	138381	138849	468
ndhB	gene	nad-dehydrogenase	+	139123	141335	2212
trnL-CAA	gene	translation-rna	+	141877	141958	81
ycf15	gene	other	−	142217	142466	249
ycf2	gene	other	−	142556	149354	6798
trnI-CAU	gene	translation-rna	+	149442	149516	74
rpl23	gene	ribosomal-protein	+	149675	149957	282
rpl2	gene	ribosomal-protein	+	149975	151457	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_057255.1DNA · accDNC_057255DNA · atpBNC_057255DNA · matKNC_057255DNA · ndhFNC_057255DNA · psbANC_057255DNA · rbcLNC_057255DNA · rps12NC_057255DNA · ycf1NC_057255