Coordinate-aware organelle record

Scutellaria antirrhinoides chloroplast genome

Available PQ075899.1 152,477 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	363	1422	1059
trnK-UUU	gene	translation-rna	−	1662	4260	2598
matK	gene	other	−	1957	3493	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUG	gene	translation-rna	−	7456	7528	72
psbK	gene	photosystem-ii	+	7852	8038	186
psbI	gene	photosystem-ii	+	8429	8540	111
trnS-GCU	gene	translation-rna	−	8656	8744	88
trnG-UCC	gene	translation-rna	+	9415	10176	761
trnR-UCU	gene	translation-rna	+	10350	10422	72
atpA	gene	atp-synthase	−	10518	12042	1524
atpF	gene	atp-synthase	−	12115	13342	1227
atpH	gene	atp-synthase	−	13700	13946	246
atpI	gene	atp-synthase	−	14943	15687	744
rps2	gene	ribosomal-protein	−	16037	16874	837
rpoC2	gene	rna-polymerase	−	16964	21170	4206
rpoC1	gene	rna-polymerase	−	21324	24154	2830
rpoB	gene	rna-polymerase	−	24180	27393	3213
trnC-GCA	gene	translation-rna	+	28554	28625	71
petN	gene	cytochrome	+	29330	29420	90
psbM	gene	photosystem-ii	−	30424	30529	105
trnD-GUC	gene	translation-rna	−	31054	31128	74
trnY-GUA	gene	translation-rna	−	31241	31325	84
trnE-UUC	gene	translation-rna	−	31384	31457	73
trnT-GGU	gene	translation-rna	+	32039	32111	72
psbD	gene	photosystem-ii	+	33413	34475	1062
psbC	gene	photosystem-ii	+	34422	35844	1422
trnS-UGA	gene	translation-rna	−	36088	36180	92
psbZ	gene	photosystem-ii	+	36500	36689	189
trnG-GCC	gene	translation-rna	+	36960	37031	71
trnfM-CAU	gene	translation-rna	−	37189	37263	74
rps14	gene	ribosomal-protein	−	37412	37715	303
psaB	gene	photosystem-i	−	37840	40045	2205
psaA	gene	photosystem-i	−	40070	42323	2253
ycf3	gene	other	−	42996	44919	1923
trnS-GGA	gene	translation-rna	+	45805	45892	87
rps4	gene	ribosomal-protein	−	46177	46783	606
trnT-UGU	gene	translation-rna	−	47121	47194	73
trnL-UAA	gene	translation-rna	+	47864	48434	570
trnF-GAA	gene	translation-rna	+	48739	48812	73
ndhJ	gene	nad-dehydrogenase	−	49466	49943	477
ndhK	gene	nad-dehydrogenase	−	50051	50729	678
ndhC	gene	nad-dehydrogenase	−	50781	51144	363
trnV-UAC	gene	translation-rna	−	52141	52794	653
trnM-CAU	gene	translation-rna	+	52974	53047	73
atpE	gene	atp-synthase	−	53256	53658	402
atpB	gene	atp-synthase	−	53654	55142	1488
rbcL	gene	other	+	55882	57346	1464
accD	gene	other	+	58075	59542	1467
psaI	gene	photosystem-i	+	60258	60369	111
ycf4	gene	other	+	60794	61349	555
cemA	gene	other	+	62094	62694	600
petA	gene	cytochrome	+	62900	63863	963
psbJ	gene	photosystem-ii	−	64892	65015	123
psbL	gene	photosystem-ii	−	65149	65371	222
psbF	gene	photosystem-ii	−	65289	65409	120
psbE	gene	photosystem-ii	−	65423	65675	252
petL	gene	cytochrome	+	66582	66678	96
petG	gene	cytochrome	+	66853	66967	114
trnW-CCA	gene	translation-rna	−	67085	67159	74
trnP-UGG	gene	translation-rna	−	67328	67402	74
psaJ	gene	photosystem-i	+	67674	67809	135
rpl33	gene	ribosomal-protein	+	68280	68481	201
rps18	gene	ribosomal-protein	+	68655	68961	306
rpl20	gene	ribosomal-protein	−	69196	69583	387
rps12	gene	ribosomal-protein	−	70378	98511	28133
rps12	gene	ribosomal-protein	+	70378	139239	68861
clpP	gene	other	−	70634	72567	1933
psbB	gene	photosystem-ii	+	73040	74567	1527
psbT	gene	photosystem-ii	+	74758	74860	102
psbN	gene	photosystem-ii	−	74933	75065	132
psbH	gene	photosystem-ii	+	75168	75390	222
petB	gene	cytochrome	+	75514	76883	1369
petD	gene	cytochrome	+	77071	78266	1195
rpoA	gene	rna-polymerase	−	78428	79442	1014
rps11	gene	ribosomal-protein	−	79513	79930	417
rpl36	gene	ribosomal-protein	−	80031	80145	114
infA	gene	other	−	80240	80474	234
rps8	gene	ribosomal-protein	−	80593	81004	411
rpl14	gene	ribosomal-protein	−	81171	81540	369
rpl16	gene	ribosomal-protein	−	81666	82911	1245
rps3	gene	ribosomal-protein	−	83065	83728	663
rpl22	gene	ribosomal-protein	−	83729	84185	456
rps19	gene	ribosomal-protein	−	84244	84523	279
rpl2	gene	ribosomal-protein	−	84577	86060	1483
rpl23	gene	ribosomal-protein	−	86078	86360	282
trnI-CAU	gene	translation-rna	−	86519	86593	74
ycf2	gene	other	+	86681	93491	6810
ycf15	gene	other	+	93632	93830	198
trnL-CAA	gene	translation-rna	−	94085	94166	81
ndhB	gene	nad-dehydrogenase	−	94708	96871	2163
rps7	gene	ribosomal-protein	−	97199	97667	468
trnV-GAC	gene	translation-rna	+	100088	100160	72
rrn16	gene	ribosomal-rna	+	100387	101878	1491
trnI-GAU	gene	translation-rna	+	102176	103197	1021
trnA-UGC	gene	translation-rna	+	103261	104144	883
rrn23	gene	ribosomal-rna	+	104313	107126	2813
rrn4.5	gene	ribosomal-rna	+	107224	107327	103
rrn5	gene	ribosomal-rna	+	107574	107695	121
trnR-ACG	gene	translation-rna	+	107929	108003	74
trnN-GUU	gene	translation-rna	−	108550	108622	72
ndhF	gene	nad-dehydrogenase	−	109698	111939	2241
rpl32	gene	ribosomal-protein	+	112459	112636	177
trnL-UAG	gene	translation-rna	+	113062	113142	80
ccsA	gene	other	+	113239	114214	975
ndhD	gene	nad-dehydrogenase	−	114446	115949	1503
psaC	gene	photosystem-i	−	116068	116314	246
ndhE	gene	nad-dehydrogenase	−	116570	116876	306
ndhG	gene	nad-dehydrogenase	−	117085	117616	531
ndhI	gene	nad-dehydrogenase	−	117980	118481	501
ndhA	gene	nad-dehydrogenase	−	118561	120654	2093
ndhH	gene	nad-dehydrogenase	−	120655	121837	1182
rps15	gene	ribosomal-protein	−	121939	122212	273
ycf1	gene	other	−	122479	128119	5640
trnN-GUU	gene	translation-rna	+	128337	128409	72
trnR-ACG	gene	translation-rna	−	128956	129030	74
rrn5	gene	ribosomal-rna	−	129264	129385	121
rrn4.5	gene	ribosomal-rna	−	129632	129735	103
rrn23	gene	ribosomal-rna	−	129833	132646	2813
trnA-UGC	gene	translation-rna	−	132815	133698	883
trnI-GAU	gene	translation-rna	−	133762	134783	1021
ycf68	gene	other	−	134388	134628	240
rrn16	gene	ribosomal-rna	−	135081	136572	1491
trnV-GAC	gene	translation-rna	−	136799	136871	72
rps7	gene	ribosomal-protein	+	139292	139760	468
ndhB	gene	nad-dehydrogenase	+	140088	142251	2163
trnL-CAA	gene	translation-rna	+	142793	142874	81
ycf15	gene	other	−	143129	143327	198
ycf2	gene	other	−	143468	150278	6810
trnI-CAU	gene	translation-rna	+	150366	150440	74
rpl23	gene	ribosomal-protein	+	150599	150881	282
rpl2	gene	ribosomal-protein	+	150899	152382	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075899.1DNA · accDPQ075899DNA · atpBPQ075899DNA · matKPQ075899DNA · ndhFPQ075899DNA · psbAPQ075899DNA · rbcLPQ075899DNA · rps12PQ075899DNA · ycf1PQ075899