Coordinate-aware organelle record

Scutellaria arabica chloroplast genome

Available PQ059208.1 152,002 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	377	1436	1059
trnK-UUU	gene	translation-rna	−	1677	4270	2593
matK	gene	other	−	1966	3511	1545
rps16	gene	ribosomal-protein	−	5184	6356	1172
trnQ-UUG	gene	translation-rna	−	7467	7539	72
psbK	gene	photosystem-ii	+	7863	8049	186
psbI	gene	photosystem-ii	+	8452	8563	111
trnS-GCU	gene	translation-rna	−	8661	8749	88
trnG-UCC	gene	translation-rna	+	9442	10197	755
trnR-UCU	gene	translation-rna	+	10366	10438	72
atpA	gene	atp-synthase	−	10534	12058	1524
atpF	gene	atp-synthase	−	12142	13373	1231
atpH	gene	atp-synthase	−	13744	13990	246
atpI	gene	atp-synthase	−	14983	15727	744
rps2	gene	ribosomal-protein	−	16074	16785	711
rpoC2	gene	rna-polymerase	−	17002	21202	4200
rpoC1	gene	rna-polymerase	−	21356	24175	2819
rpoB	gene	rna-polymerase	−	24201	27414	3213
trnC-GCA	gene	translation-rna	+	28596	28667	71
petN	gene	cytochrome	+	29402	29492	90
psbM	gene	photosystem-ii	−	30499	30604	105
trnD-GUC	gene	translation-rna	−	31135	31209	74
trnY-GUA	gene	translation-rna	−	31322	31406	84
trnE-UUC	gene	translation-rna	−	31465	31538	73
trnT-GGU	gene	translation-rna	+	32109	32181	72
psbD	gene	photosystem-ii	+	33497	34559	1062
psbC	gene	photosystem-ii	+	34506	35928	1422
trnS-UGA	gene	translation-rna	−	36162	36254	92
psbZ	gene	photosystem-ii	+	36573	36762	189
trnG-GCC	gene	translation-rna	+	37034	37105	71
trnfM-CAU	gene	translation-rna	−	37249	37323	74
rps14	gene	ribosomal-protein	−	37472	37775	303
psaB	gene	photosystem-i	−	37905	40110	2205
psaA	gene	photosystem-i	−	40135	42388	2253
ycf3	gene	other	−	43090	45021	1931
trnS-GGA	gene	translation-rna	+	45894	45981	87
rps4	gene	ribosomal-protein	−	46265	46871	606
trnT-UGU	gene	translation-rna	−	47211	47284	73
trnL-UAA	gene	translation-rna	+	47946	48513	567
trnF-GAA	gene	translation-rna	+	48818	48891	73
ndhJ	gene	nad-dehydrogenase	−	49540	50017	477
ndhK	gene	nad-dehydrogenase	−	50121	50799	678
ndhC	gene	nad-dehydrogenase	−	50851	51214	363
trnV-UAC	gene	translation-rna	−	52202	52861	659
trnM-CAU	gene	translation-rna	+	53041	53114	73
atpE	gene	atp-synthase	−	53322	53724	402
atpB	gene	atp-synthase	−	53720	55217	1497
rbcL	gene	other	+	55964	57428	1464
accD	gene	other	+	58153	59644	1491
psaI	gene	photosystem-i	+	59881	59992	111
ycf4	gene	other	+	60425	60980	555
cemA	gene	other	+	61593	62193	600
petA	gene	cytochrome	+	62388	63351	963
psbJ	gene	photosystem-ii	−	64371	64494	123
psbL	gene	photosystem-ii	−	64627	64849	222
psbF	gene	photosystem-ii	−	64767	64887	120
psbE	gene	photosystem-ii	−	64901	65153	252
petL	gene	cytochrome	+	66075	66171	96
petG	gene	cytochrome	+	66346	66460	114
trnW-CCA	gene	translation-rna	−	66568	66642	74
trnP-UGG	gene	translation-rna	−	66811	66885	74
psaJ	gene	photosystem-i	+	67157	67292	135
rpl33	gene	ribosomal-protein	+	67760	67961	201
rps18	gene	ribosomal-protein	+	68135	68441	306
rpl20	gene	ribosomal-protein	−	68681	69068	387
rps12	gene	ribosomal-protein	−	69864	97967	28103
rps12	gene	ribosomal-protein	+	69864	138762	68898
clpP	gene	other	−	70119	72055	1936
psbB	gene	photosystem-ii	+	72508	74035	1527
psbT	gene	photosystem-ii	+	74214	74322	108
psbN	gene	photosystem-ii	−	74382	74514	132
psbH	gene	photosystem-ii	+	74617	74839	222
petB	gene	cytochrome	+	74963	76333	1370
petD	gene	cytochrome	+	76521	77733	1212
rpoA	gene	rna-polymerase	−	77895	78909	1014
rps11	gene	ribosomal-protein	−	78980	79397	417
rpl36	gene	ribosomal-protein	−	79498	79612	114
infA	gene	other	−	79707	79941	234
rps8	gene	ribosomal-protein	−	80063	80474	411
rpl14	gene	ribosomal-protein	−	80639	81008	369
rpl16	gene	ribosomal-protein	−	81134	82365	1231
rps3	gene	ribosomal-protein	−	82519	83182	663
rpl22	gene	ribosomal-protein	−	83183	83639	456
rps19	gene	ribosomal-protein	−	83698	83977	279
rpl2	gene	ribosomal-protein	−	84033	85516	1483
rpl23	gene	ribosomal-protein	−	85534	85816	282
trnI-CAU	gene	translation-rna	−	85975	86049	74
ycf2	gene	other	+	86137	92947	6810
ycf15	gene	other	+	93088	93286	198
trnL-CAA	gene	translation-rna	−	93546	93627	81
ndhB	gene	nad-dehydrogenase	−	94169	96381	2212
rps7	gene	ribosomal-protein	−	96655	97123	468
trnV-GAC	gene	translation-rna	+	99539	99611	72
rrn16	gene	ribosomal-rna	+	99833	101324	1491
trnI-GAU	gene	translation-rna	+	101622	102641	1019
trnA-UGC	gene	translation-rna	+	102705	103590	885
rrn23	gene	ribosomal-rna	+	103759	106571	2812
rrn4.5	gene	ribosomal-rna	+	106669	106772	103
rrn5	gene	ribosomal-rna	+	107019	107140	121
trnR-ACG	gene	translation-rna	+	107374	107448	74
trnN-GUU	gene	translation-rna	−	108003	108075	72
ndhF	gene	nad-dehydrogenase	−	109151	111392	2241
rpl32	gene	ribosomal-protein	+	111905	112082	177
trnL-UAG	gene	translation-rna	+	112516	112596	80
ccsA	gene	other	+	112680	113655	975
ndhD	gene	nad-dehydrogenase	−	113892	115395	1503
psaC	gene	photosystem-i	−	115528	115774	246
ndhE	gene	nad-dehydrogenase	−	116029	116335	306
ndhG	gene	nad-dehydrogenase	−	116558	117089	531
ndhI	gene	nad-dehydrogenase	−	117437	117938	501
ndhA	gene	nad-dehydrogenase	−	118018	120128	2110
ndhH	gene	nad-dehydrogenase	−	120129	121311	1182
rps15	gene	ribosomal-protein	−	121407	121680	273
ycf1	gene	other	−	121948	127645	5697
trnN-GUU	gene	translation-rna	+	127863	127935	72
trnR-ACG	gene	translation-rna	−	128490	128564	74
rrn5	gene	ribosomal-rna	−	128798	128919	121
rrn4.5	gene	ribosomal-rna	−	129166	129269	103
rrn23	gene	ribosomal-rna	−	129367	132179	2812
trnA-UGC	gene	translation-rna	−	132348	133233	885
trnI-GAU	gene	translation-rna	−	133297	134316	1019
ycf68	gene	other	−	133867	134161	294
rrn16	gene	ribosomal-rna	−	134614	136105	1491
trnV-GAC	gene	translation-rna	−	136327	136399	72
rps7	gene	ribosomal-protein	+	138815	139283	468
ndhB	gene	nad-dehydrogenase	+	139557	141769	2212
trnL-CAA	gene	translation-rna	+	142311	142392	81
ycf15	gene	other	−	142652	142850	198
ycf2	gene	other	−	142991	149801	6810
trnI-CAU	gene	translation-rna	+	149889	149963	74
rpl23	gene	ribosomal-protein	+	150122	150404	282
rpl2	gene	ribosomal-protein	+	150422	151905	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059208.1DNA · accDPQ059208DNA · atpBPQ059208DNA · matKPQ059208DNA · ndhFPQ059208DNA · psbAPQ059208DNA · rbcLPQ059208DNA · rps12PQ059208DNA · ycf1PQ059208