Coordinate-aware organelle record

Scutellaria aurata chloroplast genome

Available PQ058277.1 151,855 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	376	1435	1059
trnK-UUU	gene	translation-rna	−	1675	4219	2544
matK	gene	other	−	1970	3515	1545
rps16	gene	ribosomal-protein	−	5126	6261	1135
trnQ-UUG	gene	translation-rna	−	7391	7463	72
psbK	gene	photosystem-ii	+	7787	7973	186
psbI	gene	photosystem-ii	+	8367	8478	111
trnS-GCU	gene	translation-rna	−	8597	8685	88
trnG-UCC	gene	translation-rna	+	9379	10137	758
trnR-UCU	gene	translation-rna	+	10311	10383	72
atpA	gene	atp-synthase	−	10479	12003	1524
atpF	gene	atp-synthase	−	12085	13317	1232
atpH	gene	atp-synthase	−	13685	13931	246
atpI	gene	atp-synthase	−	14916	15660	744
rps2	gene	ribosomal-protein	−	16005	16716	711
rpoC2	gene	rna-polymerase	−	17010	21144	4134
rpoC1	gene	rna-polymerase	−	21289	24130	2841
rpoB	gene	rna-polymerase	−	24156	27369	3213
trnC-GCA	gene	translation-rna	+	28531	28602	71
petN	gene	cytochrome	+	29313	29403	90
psbM	gene	photosystem-ii	−	30416	30530	114
trnD-GUC	gene	translation-rna	−	31056	31130	74
trnY-GUA	gene	translation-rna	−	31243	31327	84
trnE-UUC	gene	translation-rna	−	31377	31450	73
trnT-GGU	gene	translation-rna	+	32013	32085	72
psbD	gene	photosystem-ii	+	33396	34464	1068
psbC	gene	photosystem-ii	+	34411	35833	1422
trnS-UGA	gene	translation-rna	−	36077	36169	92
psbZ	gene	photosystem-ii	+	36488	36677	189
trnG-GCC	gene	translation-rna	+	36948	37019	71
trnfM-CAU	gene	translation-rna	−	37162	37236	74
rps14	gene	ribosomal-protein	−	37385	37688	303
psaB	gene	photosystem-i	−	37815	40020	2205
psaA	gene	photosystem-i	−	40045	42298	2253
ycf3	gene	other	−	42995	44919	1924
trnS-GGA	gene	translation-rna	+	45801	45888	87
rps4	gene	ribosomal-protein	−	46173	46779	606
trnT-UGU	gene	translation-rna	−	47121	47194	73
trnL-UAA	gene	translation-rna	+	47872	48440	568
trnF-GAA	gene	translation-rna	+	48745	48818	73
ndhJ	gene	nad-dehydrogenase	−	49460	49937	477
ndhK	gene	nad-dehydrogenase	−	50044	50722	678
ndhC	gene	nad-dehydrogenase	−	50775	51138	363
trnV-UAC	gene	translation-rna	−	51588	52242	654
trnM-CAU	gene	translation-rna	+	52430	52503	73
atpE	gene	atp-synthase	−	52711	53113	402
atpB	gene	atp-synthase	−	53109	54615	1506
rbcL	gene	other	+	55366	56827	1461
accD	gene	other	+	57547	59026	1479
psaI	gene	photosystem-i	+	59737	59848	111
ycf4	gene	other	+	60281	60836	555
cemA	gene	other	+	61580	62180	600
petA	gene	cytochrome	+	62386	63349	963
psbJ	gene	photosystem-ii	−	64371	64494	123
psbL	gene	photosystem-ii	−	64627	64849	222
psbF	gene	photosystem-ii	−	64767	64887	120
psbE	gene	photosystem-ii	−	64901	65153	252
petL	gene	cytochrome	+	66051	66147	96
petG	gene	cytochrome	+	66322	66436	114
trnW-CCA	gene	translation-rna	−	66554	66628	74
trnP-UGG	gene	translation-rna	−	66797	66871	74
psaJ	gene	photosystem-i	+	67079	67280	201
rpl33	gene	ribosomal-protein	+	67768	67969	201
rps18	gene	ribosomal-protein	+	68144	68450	306
rpl20	gene	ribosomal-protein	−	68686	69073	387
rps12	gene	ribosomal-protein	−	69873	97999	28126
rps12	gene	ribosomal-protein	+	69873	138626	68753
clpP	gene	other	−	70128	72066	1938
psbB	gene	photosystem-ii	+	72528	74055	1527
psbT	gene	photosystem-ii	+	74246	74354	108
psbN	gene	photosystem-ii	−	74414	74546	132
psbH	gene	photosystem-ii	+	74656	74878	222
petB	gene	cytochrome	+	75003	76376	1373
petD	gene	cytochrome	+	76564	77771	1207
rpoA	gene	rna-polymerase	−	78146	78944	798
rps11	gene	ribosomal-protein	−	79015	79432	417
rpl36	gene	ribosomal-protein	−	79532	79646	114
infA	gene	other	−	79741	79975	234
rps8	gene	ribosomal-protein	−	80090	80501	411
rpl14	gene	ribosomal-protein	−	80670	81039	369
rpl16	gene	ribosomal-protein	−	81151	82407	1256
rps3	gene	ribosomal-protein	−	82561	83224	663
rpl22	gene	ribosomal-protein	−	83238	83682	444
rps19	gene	ribosomal-protein	−	83741	84020	279
rpl2	gene	ribosomal-protein	−	84074	85557	1483
rpl23	gene	ribosomal-protein	−	85575	85857	282
trnI-CAU	gene	translation-rna	−	86016	86090	74
ycf2	gene	other	+	86178	92988	6810
ycf15	gene	other	+	93078	93327	249
trnL-CAA	gene	translation-rna	−	93587	93668	81
ndhB	gene	nad-dehydrogenase	−	94201	96413	2212
rps7	gene	ribosomal-protein	−	96687	97155	468
trnV-GAC	gene	translation-rna	+	99563	99635	72
rrn16	gene	ribosomal-rna	+	99862	101353	1491
trnI-GAU	gene	translation-rna	+	101651	102671	1020
trnA-UGC	gene	translation-rna	+	102735	103623	888
rrn23	gene	ribosomal-rna	+	103792	106613	2821
rrn4.5	gene	ribosomal-rna	+	106711	106814	103
rrn5	gene	ribosomal-rna	+	107061	107182	121
trnR-ACG	gene	translation-rna	+	107416	107490	74
trnN-GUU	gene	translation-rna	−	108046	108118	72
ndhF	gene	nad-dehydrogenase	−	109194	111426	2232
rpl32	gene	ribosomal-protein	+	111943	112120	177
trnL-UAG	gene	translation-rna	+	112555	112635	80
ccsA	gene	other	+	112734	113709	975
ndhD	gene	nad-dehydrogenase	−	113942	115472	1530
psaC	gene	photosystem-i	−	115571	115817	246
ndhE	gene	nad-dehydrogenase	−	116055	116361	306
ndhG	gene	nad-dehydrogenase	−	116582	117113	531
ndhI	gene	nad-dehydrogenase	−	117469	117970	501
ndhA	gene	nad-dehydrogenase	−	118050	120150	2100
ndhH	gene	nad-dehydrogenase	−	120151	121363	1212
rps15	gene	ribosomal-protein	−	121421	121772	351
ycf1	gene	other	−	121978	127387	5409
trnN-GUU	gene	translation-rna	+	127716	127788	72
trnR-ACG	gene	translation-rna	−	128344	128418	74
rrn5	gene	ribosomal-rna	−	128652	128773	121
rrn4.5	gene	ribosomal-rna	−	129020	129123	103
rrn23	gene	ribosomal-rna	−	129221	132042	2821
trnA-UGC	gene	translation-rna	−	132211	133099	888
trnI-GAU	gene	translation-rna	−	133163	134183	1020
ycf68	gene	other	−	133734	134028	294
rrn16	gene	ribosomal-rna	−	134481	135972	1491
trnV-GAC	gene	translation-rna	−	136199	136271	72
rps7	gene	ribosomal-protein	+	138679	139147	468
ndhB	gene	nad-dehydrogenase	+	139421	141633	2212
trnL-CAA	gene	translation-rna	+	142166	142247	81
ycf15	gene	other	−	142507	142756	249
ycf2	gene	other	−	142846	149656	6810
trnI-CAU	gene	translation-rna	+	149744	149818	74
rpl23	gene	ribosomal-protein	+	149977	150259	282
rpl2	gene	ribosomal-protein	+	150277	151760	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058277.1DNA · accDPQ058277DNA · atpBPQ058277DNA · matKPQ058277DNA · ndhFPQ058277DNA · psbAPQ058277DNA · rbcLPQ058277DNA · rps12PQ058277DNA · ycf1PQ058277