Scutellaria austrotaiwanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ075900.1 · 3–76 bp · −
psbA · PQ075900.1 · 366–1,424 bp · −
trnK-UUU · PQ075900.1 · 1,666–4,254 bp · −
matK · PQ075900.1 · 1,961–3,496 bp · −
rps16 · PQ075900.1 · 5,136–6,304 bp · −
trnQ-UUG · PQ075900.1 · 7,324–7,395 bp · −
trnS-GCU · PQ075900.1 · 8,526–8,613 bp · −
atpA · PQ075900.1 · 10,395–11,918 bp · −
atpF · PQ075900.1 · 12,001–13,228 bp · −
atpH · PQ075900.1 · 13,584–13,829 bp · −
atpI · PQ075900.1 · 14,816–15,559 bp · −
rps2 · PQ075900.1 · 15,907–16,743 bp · −
rpoC2 · PQ075900.1 · 16,834–21,039 bp · −
rpoC1 · PQ075900.1 · 21,194–24,025 bp · −
rpoB · PQ075900.1 · 24,052–27,264 bp · −
psbM · PQ075900.1 · 30,297–30,401 bp · −
trnD-GUC · PQ075900.1 · 30,928–31,001 bp · −
trnY-GUA · PQ075900.1 · 31,115–31,198 bp · −
trnE-UUC · PQ075900.1 · 31,258–31,330 bp · −
trnS-UGA · PQ075900.1 · 35,946–36,037 bp · −
trnfM-CAU · PQ075900.1 · 37,040–37,113 bp · −
rps14 · PQ075900.1 · 37,263–37,565 bp · −
psaB · PQ075900.1 · 37,693–39,897 bp · −
psaA · PQ075900.1 · 39,923–42,175 bp · −
ycf3 · PQ075900.1 · 42,843–44,766 bp · −
rps4 · PQ075900.1 · 46,023–46,628 bp · −
trnT-UGU · PQ075900.1 · 46,968–47,040 bp · −
ndhJ · PQ075900.1 · 49,314–49,790 bp · −
ndhK · PQ075900.1 · 49,898–50,575 bp · −
ndhC · PQ075900.1 · 50,628–50,990 bp · −
trnV-UAC · PQ075900.1 · 51,837–52,489 bp · −
atpE · PQ075900.1 · 52,958–53,359 bp · −
atpB · PQ075900.1 · 53,356–54,843 bp · −
psbJ · PQ075900.1 · 64,477–64,599 bp · −
psbL · PQ075900.1 · 64,733–64,849 bp · −
psbF · PQ075900.1 · 64,873–64,992 bp · −
psbE · PQ075900.1 · 65,007–65,258 bp · −
trnW-CCA · PQ075900.1 · 66,670–66,743 bp · −
trnP-UGG · PQ075900.1 · 66,913–66,986 bp · −
rpl20 · PQ075900.1 · 68,775–69,161 bp · −
rps12 · PQ075900.1 · 69,950–70,075 bp · −
rps12 · PQ075900.1 · 97,266–98,056 bp · −
clpP · PQ075900.1 · 70,218–72,150 bp · −
psbN · PQ075900.1 · 74,510–74,641 bp · −
rpoA · PQ075900.1 · 78,223–79,023 bp · −
rps11 · PQ075900.1 · 79,095–79,511 bp · −
rpl36 · PQ075900.1 · 79,613–79,726 bp · −
infA · PQ075900.1 · 79,822–80,055 bp · −
rps8 · PQ075900.1 · 80,175–80,585 bp · −
rpl14 · PQ075900.1 · 80,757–81,125 bp · −
rpl16 · PQ075900.1 · 81,252–82,485 bp · −
rps3 · PQ075900.1 · 82,640–83,302 bp · −
rpl22 · PQ075900.1 · 83,304–83,759 bp · −
rps19 · PQ075900.1 · 83,819–84,097 bp · −
rpl2 · PQ075900.1 · 84,152–85,634 bp · −
rpl23 · PQ075900.1 · 85,653–85,934 bp · −
trnI-CAU · PQ075900.1 · 86,094–86,167 bp · −
trnL-CAA · PQ075900.1 · 93,636–93,716 bp · −
ndhB · PQ075900.1 · 94,259–96,470 bp · −
rps7 · PQ075900.1 · 96,745–97,212 bp · −
trnN-GUU · PQ075900.1 · 108,093–108,164 bp · −
ndhF · PQ075900.1 · 109,241–111,481 bp · −
ndhD · PQ075900.1 · 113,998–115,500 bp · −
psaC · PQ075900.1 · 115,620–115,865 bp · −
ndhE · PQ075900.1 · 116,122–116,427 bp · −
ndhG · PQ075900.1 · 116,658–117,188 bp · −
ndhI · PQ075900.1 · 117,553–118,053 bp · −
ndhA · PQ075900.1 · 118,134–120,225 bp · −
ndhH · PQ075900.1 · 120,227–121,438 bp · −
rps15 · PQ075900.1 · 121,511–121,843 bp · −
ycf1 · PQ075900.1 · 122,050–127,596 bp · −
trnR-ACG · PQ075900.1 · 128,433–128,506 bp · −
rrn5 · PQ075900.1 · 128,741–128,861 bp · −
rrn4.5 · PQ075900.1 · 129,109–129,211 bp · −
rrn23 · PQ075900.1 · 129,310–132,122 bp · −
trnA-UGC · PQ075900.1 · 132,292–133,172 bp · −
trnI-GAU · PQ075900.1 · 133,237–134,257 bp · −
ycf68 · PQ075900.1 · 133,863–134,102 bp · −
rrn16 · PQ075900.1 · 134,556–136,046 bp · −
trnV-GAC · PQ075900.1 · 136,274–136,345 bp · −
ycf15 · PQ075900.1 · 142,599–142,796 bp · −
ycf2 · PQ075900.1 · 142,938–149,723 bp · −
psbK · PQ075900.1 · 7,720–7,905 bp · +
psbI · PQ075900.1 · 8,297–8,407 bp · +
trnG-UCC · PQ075900.1 · 9,295–10,056 bp · +
trnR-UCU · PQ075900.1 · 10,227–10,298 bp · +
trnC-GCA · PQ075900.1 · 28,433–28,503 bp · +
petN · PQ075900.1 · 29,215–29,304 bp · +
trnT-GGU · PQ075900.1 · 31,906–31,977 bp · +
psbD · PQ075900.1 · 33,280–34,341 bp · +
psbC · PQ075900.1 · 34,289–35,710 bp · +
psbZ · PQ075900.1 · 36,357–36,545 bp · +
trnG-GCC · PQ075900.1 · 36,817–36,887 bp · +
trnS-GGA · PQ075900.1 · 45,651–45,737 bp · +
trnL-UAA · PQ075900.1 · 47,724–48,286 bp · +
trnF-GAA · PQ075900.1 · 48,593–48,665 bp · +
trnM-CAU · PQ075900.1 · 52,670–52,742 bp · +
rbcL · PQ075900.1 · 55,593–57,056 bp · +
accD · PQ075900.1 · 57,790–59,256 bp · +
psaI · PQ075900.1 · 59,814–59,924 bp · +
ycf4 · PQ075900.1 · 60,358–60,912 bp · +
cemA · PQ075900.1 · 61,651–62,250 bp · +
petA · PQ075900.1 · 62,456–63,418 bp · +
petL · PQ075900.1 · 66,167–66,262 bp · +
petG · PQ075900.1 · 66,438–66,551 bp · +
psaJ · PQ075900.1 · 67,250–67,384 bp · +
rpl33 · PQ075900.1 · 67,858–68,058 bp · +
rps18 · PQ075900.1 · 68,233–68,538 bp · +
rps12 · PQ075900.1 · 137,923–138,713 bp · +
psbB · PQ075900.1 · 72,617–74,143 bp · +
psbT · PQ075900.1 · 74,335–74,436 bp · +
psbH · PQ075900.1 · 74,745–74,966 bp · +
petB · PQ075900.1 · 75,091–76,458 bp · +
petD · PQ075900.1 · 76,647–77,848 bp · +
ycf2 · PQ075900.1 · 86,256–93,041 bp · +
ycf15 · PQ075900.1 · 93,183–93,380 bp · +
trnV-GAC · PQ075900.1 · 99,634–99,705 bp · +
rrn16 · PQ075900.1 · 99,933–101,423 bp · +
trnI-GAU · PQ075900.1 · 101,722–102,742 bp · +
trnA-UGC · PQ075900.1 · 102,807–103,687 bp · +
rrn23 · PQ075900.1 · 103,857–106,669 bp · +
rrn4.5 · PQ075900.1 · 106,768–106,870 bp · +
rrn5 · PQ075900.1 · 107,118–107,238 bp · +
trnR-ACG · PQ075900.1 · 107,473–107,546 bp · +
rpl32 · PQ075900.1 · 111,993–112,169 bp · +
trnL-UAG · PQ075900.1 · 112,615–112,694 bp · +
ccsA · PQ075900.1 · 112,791–113,765 bp · +
trnN-GUU · PQ075900.1 · 127,815–127,886 bp · +
rps7 · PQ075900.1 · 138,767–139,234 bp · +
ndhB · PQ075900.1 · 139,509–141,720 bp · +
trnL-CAA · PQ075900.1 · 142,263–142,343 bp · +
trnI-CAU · PQ075900.1 · 149,812–149,885 bp · +
rpl23 · PQ075900.1 · 150,045–150,326 bp · +
rpl2 · PQ075900.1 · 150,345–151,827 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria austrotaiwanensis
ANNOTATED PLASTOME
PQ075900.1
151,922 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37980 75961 113942 151922 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU ycf68 rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 366 1424 1059 Locate
trnK-UUU gene − 1666 4254 2589 Locate
matK gene − 1961 3496 1536 Locate
rps16 gene − 5136 6304 1169 Locate
trnQ-UUG gene − 7324 7395 72 Locate
psbK gene + 7720 7905 186 Locate
psbI gene + 8297 8407 111 Locate
trnS-GCU gene − 8526 8613 88 Locate
trnG-UCC gene + 9295 10056 762 Locate
trnR-UCU gene + 10227 10298 72 Locate
atpA gene − 10395 11918 1524 Locate
atpF gene − 12001 13228 1228 Locate
atpH gene − 13584 13829 246 Locate
atpI gene − 14816 15559 744 Locate
rps2 gene − 15907 16743 837 Locate
rpoC2 gene − 16834 21039 4206 Locate
rpoC1 gene − 21194 24025 2832 Locate
rpoB gene − 24052 27264 3213 Locate
trnC-GCA gene + 28433 28503 71 Locate
petN gene + 29215 29304 90 Locate
psbM gene − 30297 30401 105 Locate
trnD-GUC gene − 30928 31001 74 Locate
trnY-GUA gene − 31115 31198 84 Locate
trnE-UUC gene − 31258 31330 73 Locate
trnT-GGU gene + 31906 31977 72 Locate
psbD gene + 33280 34341 1062 Locate
psbC gene + 34289 35710 1422 Locate
trnS-UGA gene − 35946 36037 92 Locate
psbZ gene + 36357 36545 189 Locate
trnG-GCC gene + 36817 36887 71 Locate
trnfM-CAU gene − 37040 37113 74 Locate
rps14 gene − 37263 37565 303 Locate
psaB gene − 37693 39897 2205 Locate
psaA gene − 39923 42175 2253 Locate
ycf3 gene − 42843 44766 1924 Locate
trnS-GGA gene + 45651 45737 87 Locate
rps4 gene − 46023 46628 606 Locate
trnT-UGU gene − 46968 47040 73 Locate
trnL-UAA gene + 47724 48286 563 Locate
trnF-GAA gene + 48593 48665 73 Locate
ndhJ gene − 49314 49790 477 Locate
ndhK gene − 49898 50575 678 Locate
ndhC gene − 50628 50990 363 Locate
trnV-UAC gene − 51837 52489 653 Locate
trnM-CAU gene + 52670 52742 73 Locate
atpE gene − 52958 53359 402 Locate
atpB gene − 53356 54843 1488 Locate
rbcL gene + 55593 57056 1464 Locate
accD gene + 57790 59256 1467 Locate
psaI gene + 59814 59924 111 Locate
ycf4 gene + 60358 60912 555 Locate
cemA gene + 61651 62250 600 Locate
petA gene + 62456 63418 963 Locate
psbJ gene − 64477 64599 123 Locate
psbL gene − 64733 64849 117 Locate
psbF gene − 64873 64992 120 Locate
psbE gene − 65007 65258 252 Locate
petL gene + 66167 66262 96 Locate
petG gene + 66438 66551 114 Locate
trnW-CCA gene − 66670 66743 74 Locate
trnP-UGG gene − 66913 66986 74 Locate
psaJ gene + 67250 67384 135 Locate
rpl33 gene + 67858 68058 201 Locate
rps18 gene + 68233 68538 306 Locate
rpl20 gene − 68775 69161 387 Locate
rps12 gene − 69950 70075 126 Locate
clpP gene − 70218 72150 1933 Locate
psbB gene + 72617 74143 1527 Locate
psbT gene + 74335 74436 102 Locate
psbN gene − 74510 74641 132 Locate
psbH gene + 74745 74966 222 Locate
petB gene + 75091 76458 1368 Locate
petD gene + 76647 77848 1202 Locate
rpoA gene − 78223 79023 801 Locate
rps11 gene − 79095 79511 417 Locate
rpl36 gene − 79613 79726 114 Locate
infA gene − 79822 80055 234 Locate
rps8 gene − 80175 80585 411 Locate
rpl14 gene − 80757 81125 369 Locate
rpl16 gene − 81252 82485 1234 Locate
rps3 gene − 82640 83302 663 Locate
rpl22 gene − 83304 83759 456 Locate
rps19 gene − 83819 84097 279 Locate
rpl2 gene − 84152 85634 1483 Locate
rpl23 gene − 85653 85934 282 Locate
trnI-CAU gene − 86094 86167 74 Locate
ycf2 gene + 86256 93041 6786 Locate
ycf15 gene + 93183 93380 198 Locate
trnL-CAA gene − 93636 93716 81 Locate
ndhB gene − 94259 96470 2212 Locate
rps7 gene − 96745 97212 468 Locate
rps12 gene − 97266 98056 791 Locate
trnV-GAC gene + 99634 99705 72 Locate
rrn16 gene + 99933 101423 1491 Locate
trnI-GAU gene + 101722 102742 1021 Locate
trnA-UGC gene + 102807 103687 881 Locate
rrn23 gene + 103857 106669 2813 Locate
rrn4.5 gene + 106768 106870 103 Locate
rrn5 gene + 107118 107238 121 Locate
trnR-ACG gene + 107473 107546 74 Locate
trnN-GUU gene − 108093 108164 72 Locate
ndhF gene − 109241 111481 2241 Locate
rpl32 gene + 111993 112169 177 Locate
trnL-UAG gene + 112615 112694 80 Locate
ccsA gene + 112791 113765 975 Locate
ndhD gene − 113998 115500 1503 Locate
psaC gene − 115620 115865 246 Locate
ndhE gene − 116122 116427 306 Locate
ndhG gene − 116658 117188 531 Locate
ndhI gene − 117553 118053 501 Locate
ndhA gene − 118134 120225 2092 Locate
ndhH gene − 120227 121438 1212 Locate
rps15 gene − 121511 121843 333 Locate
ycf1 gene − 122050 127596 5547 Locate
trnN-GUU gene + 127815 127886 72 Locate
trnR-ACG gene − 128433 128506 74 Locate
rrn5 gene − 128741 128861 121 Locate
rrn4.5 gene − 129109 129211 103 Locate
rrn23 gene − 129310 132122 2813 Locate
trnA-UGC gene − 132292 133172 881 Locate
trnI-GAU gene − 133237 134257 1021 Locate
ycf68 gene − 133863 134102 240 Locate
rrn16 gene − 134556 136046 1491 Locate
trnV-GAC gene − 136274 136345 72 Locate
rps12 gene + 137923 138713 791 Locate
rps7 gene + 138767 139234 468 Locate
ndhB gene + 139509 141720 2212 Locate
trnL-CAA gene + 142263 142343 81 Locate
ycf15 gene − 142599 142796 198 Locate
ycf2 gene − 142938 149723 6786 Locate
trnI-CAU gene + 149812 149885 74 Locate
rpl23 gene + 150045 150326 282 Locate
rpl2 gene + 150345 151827 1483 Locate
Status Available
Accession PQ075900.1
Length 151,922 bp
GC content 38.4%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources