Coordinate-aware organelle record

Scutellaria axilliflora var. medullifera chloroplast genome

Available PQ075902.1 152,141 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1656	4245	2589
matK	gene	other	−	1951	3487	1536
rps16	gene	ribosomal-protein	−	5119	6292	1173
trnQ-UUG	gene	translation-rna	−	7330	7402	72
psbK	gene	photosystem-ii	+	7726	7912	186
psbI	gene	photosystem-ii	+	8303	8414	111
trnS-GCU	gene	translation-rna	−	8531	8619	88
trnG-UCC	gene	translation-rna	+	9298	10059	761
trnR-UCU	gene	translation-rna	+	10229	10301	72
atpA	gene	atp-synthase	−	10396	11920	1524
atpF	gene	atp-synthase	−	12002	13229	1227
atpH	gene	atp-synthase	−	13583	13829	246
atpI	gene	atp-synthase	−	14816	15560	744
rps2	gene	ribosomal-protein	−	15908	16619	711
rpoC2	gene	rna-polymerase	−	16834	21040	4206
rpoC1	gene	rna-polymerase	−	21194	24023	2829
rpoB	gene	rna-polymerase	−	24049	27262	3213
trnC-GCA	gene	translation-rna	+	28423	28494	71
petN	gene	cytochrome	+	29206	29296	90
psbM	gene	photosystem-ii	−	30327	30432	105
trnD-GUC	gene	translation-rna	−	30958	31032	74
trnY-GUA	gene	translation-rna	−	31145	31229	84
trnE-UUC	gene	translation-rna	−	31288	31361	73
trnT-GGU	gene	translation-rna	+	31936	32008	72
psbD	gene	photosystem-ii	+	33314	34376	1062
psbC	gene	photosystem-ii	+	34323	35745	1422
trnS-UGA	gene	translation-rna	−	35980	36072	92
psbZ	gene	photosystem-ii	+	36391	36580	189
trnG-GCC	gene	translation-rna	+	36851	36922	71
trnfM-CAU	gene	translation-rna	−	37076	37150	74
rps14	gene	ribosomal-protein	−	37299	37602	303
psaB	gene	photosystem-i	−	37729	39934	2205
psaA	gene	photosystem-i	−	39959	42212	2253
ycf3	gene	other	−	42881	44805	1924
trnS-GGA	gene	translation-rna	+	45689	45776	87
rps4	gene	ribosomal-protein	−	46061	46667	606
trnT-UGU	gene	translation-rna	−	46996	47069	73
trnL-UAA	gene	translation-rna	+	47754	48316	562
trnF-GAA	gene	translation-rna	+	48622	48695	73
ndhJ	gene	nad-dehydrogenase	−	49343	49820	477
ndhK	gene	nad-dehydrogenase	−	49927	50605	678
ndhC	gene	nad-dehydrogenase	−	50657	51020	363
trnV-UAC	gene	translation-rna	−	51875	52528	653
trnM-CAU	gene	translation-rna	+	52708	52781	73
atpE	gene	atp-synthase	−	52996	53398	402
atpB	gene	atp-synthase	−	53394	54882	1488
rbcL	gene	other	+	55631	57095	1464
accD	gene	other	+	57821	59288	1467
psaI	gene	photosystem-i	+	59845	59956	111
ycf4	gene	other	+	60389	60944	555
cemA	gene	other	+	61681	62281	600
petA	gene	cytochrome	+	62487	63450	963
psbJ	gene	photosystem-ii	−	64483	64606	123
psbL	gene	photosystem-ii	−	64739	64856	117
psbF	gene	photosystem-ii	−	64879	64999	120
psbE	gene	photosystem-ii	−	65013	65265	252
petL	gene	cytochrome	+	66173	66269	96
petG	gene	cytochrome	+	66444	66558	114
trnW-CCA	gene	translation-rna	−	66676	66750	74
trnP-UGG	gene	translation-rna	−	66919	66993	74
psaJ	gene	photosystem-i	+	67265	67400	135
rpl33	gene	ribosomal-protein	+	67873	68074	201
rps18	gene	ribosomal-protein	+	68249	68555	306
rpl20	gene	ribosomal-protein	−	68791	69178	387
rps12	gene	ribosomal-protein	−	69978	98136	28158
rps12	gene	ribosomal-protein	+	69978	138908	68930
clpP	gene	other	−	70234	72168	1934
psbB	gene	photosystem-ii	+	72645	74172	1527
psbT	gene	photosystem-ii	+	74363	74465	102
psbN	gene	photosystem-ii	−	74538	74670	132
psbH	gene	photosystem-ii	+	74773	74995	222
petB	gene	cytochrome	+	75119	76487	1368
petD	gene	cytochrome	+	76675	77877	1202
rpoA	gene	rna-polymerase	−	78052	79066	1014
rps11	gene	ribosomal-protein	−	79137	79554	417
rpl36	gene	ribosomal-protein	−	79655	79769	114
infA	gene	other	−	79864	80098	234
rps8	gene	ribosomal-protein	−	80217	80643	426
rpl14	gene	ribosomal-protein	−	80812	81181	369
rpl16	gene	ribosomal-protein	−	81307	82541	1234
rps3	gene	ribosomal-protein	−	82695	83358	663
rpl22	gene	ribosomal-protein	−	83359	83815	456
rps19	gene	ribosomal-protein	−	83874	84153	279
rpl2	gene	ribosomal-protein	−	84207	85690	1483
rpl23	gene	ribosomal-protein	−	85708	85990	282
trnI-CAU	gene	translation-rna	−	86149	86223	74
ycf2	gene	other	+	86311	93121	6810
ycf15	gene	other	+	93262	93460	198
trnL-CAA	gene	translation-rna	−	93715	93796	81
ndhB	gene	nad-dehydrogenase	−	94338	96496	2158
rps7	gene	ribosomal-protein	−	96824	97292	468
trnV-GAC	gene	translation-rna	+	99713	99785	72
rrn16	gene	ribosomal-rna	+	100012	101503	1491
trnI-GAU	gene	translation-rna	+	101801	102822	1021
trnA-UGC	gene	translation-rna	+	102886	103771	885
rrn23	gene	ribosomal-rna	+	103940	106753	2813
rrn4.5	gene	ribosomal-rna	+	106851	106954	103
rrn5	gene	ribosomal-rna	+	107201	107322	121
trnR-ACG	gene	translation-rna	+	107556	107630	74
trnN-GUU	gene	translation-rna	−	108176	108248	72
ndhF	gene	nad-dehydrogenase	−	109324	111565	2241
rpl32	gene	ribosomal-protein	+	112085	112262	177
trnL-UAG	gene	translation-rna	+	112705	112785	80
ccsA	gene	other	+	112881	113856	975
ndhD	gene	nad-dehydrogenase	−	114088	115591	1503
psaC	gene	photosystem-i	−	115710	115956	246
ndhE	gene	nad-dehydrogenase	−	116212	116518	306
ndhG	gene	nad-dehydrogenase	−	116748	117279	531
ndhI	gene	nad-dehydrogenase	−	117643	118144	501
ndhA	gene	nad-dehydrogenase	−	118224	120317	2093
ndhH	gene	nad-dehydrogenase	−	120318	121500	1182
rps15	gene	ribosomal-protein	−	121602	121875	273
ycf1	gene	other	−	122141	127787	5646
trnN-GUU	gene	translation-rna	+	128005	128077	72
trnR-ACG	gene	translation-rna	−	128623	128697	74
rrn5	gene	ribosomal-rna	−	128931	129052	121
rrn4.5	gene	ribosomal-rna	−	129299	129402	103
rrn23	gene	ribosomal-rna	−	129500	132313	2813
trnA-UGC	gene	translation-rna	−	132482	133367	885
trnI-GAU	gene	translation-rna	−	133431	134452	1021
ycf68	gene	other	−	134057	134297	240
rrn16	gene	ribosomal-rna	−	134750	136241	1491
trnV-GAC	gene	translation-rna	−	136468	136540	72
rps7	gene	ribosomal-protein	+	138961	139429	468
ndhB	gene	nad-dehydrogenase	+	139757	141915	2158
trnL-CAA	gene	translation-rna	+	142457	142538	81
ycf15	gene	other	−	142793	142991	198
ycf2	gene	other	−	143132	149942	6810
trnI-CAU	gene	translation-rna	+	150030	150104	74
rpl23	gene	ribosomal-protein	+	150263	150545	282
rpl2	gene	ribosomal-protein	+	150563	152046	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075902.1DNA · accDPQ075902DNA · atpBPQ075902DNA · matKPQ075902DNA · ndhFPQ075902DNA · psbAPQ075902DNA · rbcLPQ075902DNA · rps12PQ075902DNA · ycf1PQ075902