Coordinate-aware organelle record

Scutellaria axilliflora chloroplast genome

Available PQ075901.1 152,231 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1959	3495	1536
rps16	gene	ribosomal-protein	−	5126	6299	1173
trnQ-UUG	gene	translation-rna	−	7375	7447	72
psbK	gene	photosystem-ii	+	7771	7957	186
psbI	gene	photosystem-ii	+	8356	8467	111
trnS-GCU	gene	translation-rna	−	8589	8677	88
trnG-UCC	gene	translation-rna	+	9356	10117	761
trnR-UCU	gene	translation-rna	+	10287	10359	72
atpA	gene	atp-synthase	−	10455	11979	1524
atpF	gene	atp-synthase	−	12061	13289	1228
atpH	gene	atp-synthase	−	13644	13890	246
atpI	gene	atp-synthase	−	14885	15629	744
rps2	gene	ribosomal-protein	−	15977	16814	837
rpoC2	gene	rna-polymerase	−	16904	21110	4206
rpoC1	gene	rna-polymerase	−	21264	24094	2830
rpoB	gene	rna-polymerase	−	24120	27333	3213
trnC-GCA	gene	translation-rna	+	28502	28573	71
petN	gene	cytochrome	+	29285	29375	90
psbM	gene	photosystem-ii	−	30432	30537	105
trnD-GUC	gene	translation-rna	−	31063	31137	74
trnY-GUA	gene	translation-rna	−	31250	31334	84
trnE-UUC	gene	translation-rna	−	31393	31466	73
trnT-GGU	gene	translation-rna	+	32041	32113	72
psbD	gene	photosystem-ii	+	33419	34481	1062
psbC	gene	photosystem-ii	+	34428	35850	1422
trnS-UGA	gene	translation-rna	−	36085	36177	92
psbZ	gene	photosystem-ii	+	36496	36685	189
trnG-GCC	gene	translation-rna	+	36956	37027	71
trnfM-CAU	gene	translation-rna	−	37180	37254	74
rps14	gene	ribosomal-protein	−	37403	37706	303
psaB	gene	photosystem-i	−	37833	40038	2205
psaA	gene	photosystem-i	−	40063	42316	2253
ycf3	gene	other	−	42977	44901	1924
trnS-GGA	gene	translation-rna	+	45785	45872	87
rps4	gene	ribosomal-protein	−	46157	46763	606
trnT-UGU	gene	translation-rna	−	47088	47161	73
trnL-UAA	gene	translation-rna	+	47847	48409	562
trnF-GAA	gene	translation-rna	+	48715	48788	73
ndhJ	gene	nad-dehydrogenase	−	49436	49913	477
ndhK	gene	nad-dehydrogenase	−	50020	50698	678
ndhC	gene	nad-dehydrogenase	−	50750	51113	363
trnV-UAC	gene	translation-rna	−	51969	52622	653
trnM-CAU	gene	translation-rna	+	52802	52875	73
atpE	gene	atp-synthase	−	53090	53492	402
atpB	gene	atp-synthase	−	53488	54976	1488
rbcL	gene	other	+	55725	57189	1464
accD	gene	other	+	57922	59389	1467
psaI	gene	photosystem-i	+	59962	60073	111
ycf4	gene	other	+	60506	61061	555
cemA	gene	other	+	61798	62398	600
petA	gene	cytochrome	+	62604	63567	963
psbJ	gene	photosystem-ii	−	64600	64723	123
psbL	gene	photosystem-ii	−	64856	64973	117
psbF	gene	photosystem-ii	−	64996	65116	120
psbE	gene	photosystem-ii	−	65130	65382	252
petL	gene	cytochrome	+	66290	66386	96
petG	gene	cytochrome	+	66561	66675	114
trnW-CCA	gene	translation-rna	−	66793	66867	74
trnP-UGG	gene	translation-rna	−	67036	67110	74
psaJ	gene	photosystem-i	+	67382	67517	135
rpl33	gene	ribosomal-protein	+	67990	68191	201
rps18	gene	ribosomal-protein	+	68366	68672	306
rpl20	gene	ribosomal-protein	−	68909	69296	387
rps12	gene	ribosomal-protein	−	70097	98223	28126
rps12	gene	ribosomal-protein	+	70097	138998	68901
clpP	gene	other	−	70353	72288	1935
psbB	gene	photosystem-ii	+	72754	74281	1527
psbT	gene	photosystem-ii	+	74472	74574	102
psbN	gene	photosystem-ii	−	74647	74779	132
psbH	gene	photosystem-ii	+	74882	75104	222
petB	gene	cytochrome	+	75228	76596	1368
petD	gene	cytochrome	+	76784	77986	1202
rpoA	gene	rna-polymerase	−	78148	79168	1020
rps11	gene	ribosomal-protein	−	79239	79656	417
rpl36	gene	ribosomal-protein	−	79757	79871	114
infA	gene	other	−	79966	80200	234
rps8	gene	ribosomal-protein	−	80319	80730	411
rpl14	gene	ribosomal-protein	−	80899	81268	369
rpl16	gene	ribosomal-protein	−	81394	82628	1234
rps3	gene	ribosomal-protein	−	82782	83445	663
rpl22	gene	ribosomal-protein	−	83446	83902	456
rps19	gene	ribosomal-protein	−	83961	84240	279
rpl2	gene	ribosomal-protein	−	84294	85777	1483
rpl23	gene	ribosomal-protein	−	85795	86077	282
trnI-CAU	gene	translation-rna	−	86236	86310	74
ycf2	gene	other	+	86398	93208	6810
ycf15	gene	other	+	93298	93547	249
trnL-CAA	gene	translation-rna	−	93802	93883	81
ndhB	gene	nad-dehydrogenase	−	94425	96583	2158
rps7	gene	ribosomal-protein	−	96911	97379	468
trnV-GAC	gene	translation-rna	+	99800	99872	72
rrn16	gene	ribosomal-rna	+	100099	101590	1491
trnI-GAU	gene	translation-rna	+	101888	102909	1021
trnA-UGC	gene	translation-rna	+	102973	103859	886
rrn23	gene	ribosomal-rna	+	104028	106841	2813
rrn4.5	gene	ribosomal-rna	+	106939	107042	103
rrn5	gene	ribosomal-rna	+	107289	107410	121
trnR-ACG	gene	translation-rna	+	107644	107718	74
trnN-GUU	gene	translation-rna	−	108264	108336	72
ndhF	gene	nad-dehydrogenase	−	109412	111653	2241
rpl32	gene	ribosomal-protein	+	112173	112350	177
trnL-UAG	gene	translation-rna	+	112794	112874	80
ccsA	gene	other	+	112970	113945	975
ndhD	gene	nad-dehydrogenase	−	114177	115680	1503
psaC	gene	photosystem-i	−	115799	116045	246
ndhE	gene	nad-dehydrogenase	−	116301	116607	306
ndhG	gene	nad-dehydrogenase	−	116837	117368	531
ndhI	gene	nad-dehydrogenase	−	117732	118233	501
ndhA	gene	nad-dehydrogenase	−	118313	120406	2093
ndhH	gene	nad-dehydrogenase	−	120407	121589	1182
rps15	gene	ribosomal-protein	−	121691	121964	273
ycf1	gene	other	−	122230	127876	5646
trnN-GUU	gene	translation-rna	+	128094	128166	72
trnR-ACG	gene	translation-rna	−	128712	128786	74
rrn5	gene	ribosomal-rna	−	129020	129141	121
rrn4.5	gene	ribosomal-rna	−	129388	129491	103
rrn23	gene	ribosomal-rna	−	129589	132402	2813
trnA-UGC	gene	translation-rna	−	132571	133457	886
trnI-GAU	gene	translation-rna	−	133521	134542	1021
ycf68	gene	other	−	134147	134387	240
rrn16	gene	ribosomal-rna	−	134840	136331	1491
trnV-GAC	gene	translation-rna	−	136558	136630	72
rps7	gene	ribosomal-protein	+	139051	139519	468
ndhB	gene	nad-dehydrogenase	+	139847	142005	2158
trnL-CAA	gene	translation-rna	+	142547	142628	81
ycf15	gene	other	−	142883	143132	249
ycf2	gene	other	−	143222	150032	6810
trnI-CAU	gene	translation-rna	+	150120	150194	74
rpl23	gene	ribosomal-protein	+	150353	150635	282
rpl2	gene	ribosomal-protein	+	150653	152136	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075901.1DNA · accDPQ075901DNA · atpBPQ075901DNA · matKPQ075901DNA · ndhFPQ075901DNA · psbAPQ075901DNA · rbcLPQ075901DNA · rps12PQ075901DNA · ycf1PQ075901