Coordinate-aware organelle record

Scutellaria baicalensis chloroplast genome

Available NC_027262.1 152,731 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	178	252	74
psbA	gene	photosystem-ii	−	554	1613	1059
trnK-UUU	gene	translation-rna	−	1857	4431	2574
matK	gene	other	−	2119	3676	1557
rps16	gene	ribosomal-protein	−	4965	6137	1172
trnQ-UUG	gene	translation-rna	−	7119	7191	72
psbK	gene	photosystem-ii	+	7575	7761	186
psbI	gene	photosystem-ii	+	8140	8251	111
trnS-GCU	gene	translation-rna	−	8438	8526	88
trnG-UCC	gene	translation-rna	+	9153	9906	753
trnR-UCU	gene	translation-rna	+	10117	10189	72
atpA	gene	atp-synthase	−	10285	11809	1524
atpF	gene	atp-synthase	−	11899	13136	1237
atpH	gene	atp-synthase	−	13498	13744	246
atpI	gene	atp-synthase	−	14714	15458	744
rps2	gene	ribosomal-protein	−	15685	16396	711
rpoC2	gene	rna-polymerase	−	16609	20815	4206
rpoC1	gene	rna-polymerase	−	20969	23829	2860
rpoB	gene	rna-polymerase	−	23834	27047	3213
trnC-GCA	gene	translation-rna	+	28208	28279	71
petN	gene	cytochrome	+	28486	28576	90
psbM	gene	photosystem-ii	−	29577	29682	105
trnD-GUC	gene	translation-rna	−	30208	30282	74
trnY-GUA	gene	translation-rna	−	30400	30484	84
trnT-GGU	gene	translation-rna	+	31184	31256	72
psbD	gene	photosystem-ii	+	32709	33771	1062
psbC	gene	photosystem-ii	+	33718	35140	1422
trnS-UGA	gene	translation-rna	−	35374	35466	92
psbZ	gene	photosystem-ii	+	35782	35971	189
trnG-GCC	gene	translation-rna	+	36246	36317	71
trnfM-CAU	gene	translation-rna	−	36501	36575	74
rps14	gene	ribosomal-protein	−	36724	37027	303
psaB	gene	photosystem-i	−	37154	39359	2205
psaA	gene	photosystem-i	−	39384	41637	2253
ycf3	gene	other	−	42429	44356	1927
trnS-GGA	gene	translation-rna	+	45220	45307	87
rps4	gene	ribosomal-protein	−	45588	46194	606
trnT-UGU	gene	translation-rna	−	46584	46657	73
trnL-UAA	gene	translation-rna	+	47347	47923	576
trnF-GAA	gene	translation-rna	+	48231	48304	73
ndhJ	gene	nad-dehydrogenase	−	48839	49316	477
ndhK	gene	nad-dehydrogenase	−	49424	50102	678
ndhC	gene	nad-dehydrogenase	−	50154	50517	363
trnV-UAC	gene	translation-rna	−	51477	52130	653
trnM-CAU	gene	translation-rna	+	52318	52391	73
atpE	gene	atp-synthase	−	52599	53001	402
atpB	gene	atp-synthase	−	52997	54494	1497
rbcL	gene	other	+	55261	56713	1452
accD	gene	other	+	57419	58898	1479
psaI	gene	photosystem-i	+	59367	59478	111
ycf4	gene	other	+	59911	60466	555
cemA	gene	other	+	61011	61701	690
petA	gene	cytochrome	+	61902	62865	963
psbJ	gene	photosystem-ii	−	63929	64052	123
psbL	gene	photosystem-ii	−	64185	64302	117
psbF	gene	photosystem-ii	−	64325	64445	120
psbE	gene	photosystem-ii	−	64459	64711	252
petL	gene	cytochrome	+	65516	65612	96
petG	gene	cytochrome	+	65787	65901	114
trnW-CCA	gene	translation-rna	−	66019	66093	74
trnP-UGG	gene	translation-rna	−	66262	66336	74
psaJ	gene	photosystem-i	+	66656	66791	135
rpl33	gene	ribosomal-protein	+	67266	67467	201
rps18	gene	ribosomal-protein	+	67641	67947	306
rpl20	gene	ribosomal-protein	−	68181	68568	387
rps12	gene	ribosomal-protein	−	69354	97623	28269
rps12	gene	ribosomal-protein	+	69354	138989	69635
clpP	gene	other	−	69621	71562	1941
psbB	gene	photosystem-ii	+	72019	73546	1527
psbT	gene	photosystem-ii	+	73737	73845	108
psbN	gene	photosystem-ii	−	73905	74037	132
psbH	gene	photosystem-ii	+	74140	74362	222
petB	gene	cytochrome	+	74486	75857	1371
petD	gene	cytochrome	+	76045	77197	1152
rpoA	gene	rna-polymerase	−	77359	78373	1014
rps11	gene	ribosomal-protein	−	78444	78861	417
rpl36	gene	ribosomal-protein	−	78962	79076	114
infA	gene	other	−	79170	79404	234
rps8	gene	ribosomal-protein	−	79527	79938	411
rpl14	gene	ribosomal-protein	−	80124	80493	369
rpl16	gene	ribosomal-protein	−	80619	81929	1310
rps3	gene	ribosomal-protein	−	82060	82723	663
rpl22	gene	ribosomal-protein	−	82724	83180	456
rps19	gene	ribosomal-protein	−	83239	83575	336
rpl2	gene	ribosomal-protein	−	83631	85113	1482
rpl23	gene	ribosomal-protein	−	85131	85413	282
trnI-CAU	gene	translation-rna	−	85572	85646	74
ycf2	gene	other	+	85734	92604	6870
ycf15	gene	other	+	92694	92943	249
trnL-CAA	gene	translation-rna	−	93202	93283	81
ndhB	gene	nad-dehydrogenase	−	93825	96037	2212
rps7	gene	ribosomal-protein	−	96311	96779	468
trnV-GAC	gene	translation-rna	+	99222	99294	72
rrn16	gene	ribosomal-rna	+	99520	101011	1491
trnI-GAU	gene	translation-rna	+	101309	102329	1020
trnA-UGC	gene	translation-rna	+	102393	103275	882
rrn23	gene	ribosomal-rna	+	103444	106256	2812
rrn4.5	gene	ribosomal-rna	+	106354	106457	103
rrn5	gene	ribosomal-rna	+	106704	106825	121
trnR-ACG	gene	translation-rna	+	107059	107133	74
trnN-GUU	gene	translation-rna	−	107689	107761	72
ndhF	gene	nad-dehydrogenase	−	109064	111311	2247
rpl32	gene	ribosomal-protein	+	111771	111948	177
trnL-UAG	gene	translation-rna	+	112571	112651	80
ccsA	gene	other	+	112747	113722	975
ndhD	gene	nad-dehydrogenase	−	113971	115501	1530
psaC	gene	photosystem-i	−	115601	115847	246
ndhE	gene	nad-dehydrogenase	−	116102	116408	306
ndhG	gene	nad-dehydrogenase	−	116629	117160	531
ndhI	gene	nad-dehydrogenase	−	117530	118031	501
ndhA	gene	nad-dehydrogenase	−	118111	120225	2114
ndhH	gene	nad-dehydrogenase	−	120226	121408	1182
rps15	gene	ribosomal-protein	−	121504	121777	273
ycf1	gene	other	−	122193	127731	5538
trnN-GUU	gene	translation-rna	+	128060	128132	72
trnR-ACG	gene	translation-rna	−	128688	128762	74
rrn5	gene	ribosomal-rna	−	128996	129117	121
rrn4.5	gene	ribosomal-rna	−	129364	129467	103
rrn23	gene	ribosomal-rna	−	129565	132377	2812
trnA-UGC	gene	translation-rna	−	132546	133428	882
trnI-GAU	gene	translation-rna	−	133492	134512	1020
rrn16	gene	ribosomal-rna	−	134810	136301	1491
trnV-GAC	gene	translation-rna	−	136527	136599	72
rps7	gene	ribosomal-protein	+	139042	139510	468
ndhB	gene	nad-dehydrogenase	+	139784	141996	2212
trnL-CAA	gene	translation-rna	+	142538	142619	81
ycf15	gene	other	−	142878	143127	249
ycf2	gene	other	−	143217	150087	6870
trnI-CAU	gene	translation-rna	+	150175	150249	74
rpl23	gene	ribosomal-protein	+	150408	150690	282
rpl2	gene	ribosomal-protein	+	150708	152190	1482
rps19	gene	ribosomal-protein	+	152246	152303	57

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_027262.1DNA · accDNC_027262DNA · atpBNC_027262DNA · matKNC_027262DNA · ndhFNC_027262DNA · psbANC_027262DNA · rbcLNC_027262DNA · rps12NC_027262DNA · ycf1NC_027262