Coordinate-aware organelle record

Scutellaria bolanderi chloroplast genome

Available MW420972.1 152,310 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	363	1422	1059
trnK-UUU	gene	translation-rna	−	1666	4255	2589
matK	gene	other	−	1957	3493	1536
rps16	gene	ribosomal-protein	−	5149	6318	1169
trnQ-UUC	gene	translation-rna	−	7438	7510	72
psbK	gene	photosystem-ii	+	7834	8020	186
psbI	gene	photosystem-ii	+	8410	8521	111
trnS-GCU	gene	translation-rna	−	8636	8724	88
trnG-CGA	gene	translation-rna	+	9395	10156	761
trnR-UCU	gene	translation-rna	+	10330	10402	72
atpA	gene	atp-synthase	−	10498	12022	1524
atpF	gene	atp-synthase	−	12095	13322	1227
atpH	gene	atp-synthase	−	13687	13933	246
atpI	gene	atp-synthase	−	14921	15665	744
rps2	gene	ribosomal-protein	−	16014	16725	711
rpoC2	gene	rna-polymerase	−	16941	21147	4206
rpoC1	gene	rna-polymerase	−	21301	24131	2830
rpoB	gene	rna-polymerase	−	24157	27370	3213
trnC-GCA	gene	translation-rna	+	28531	28602	71
petN	gene	cytochrome	+	29331	29421	90
psbM	gene	photosystem-ii	−	30416	30521	105
trnD-GUC	gene	translation-rna	−	31046	31120	74
trnY-GUA	gene	translation-rna	−	31233	31317	84
trnE-UUC	gene	translation-rna	−	31376	31449	73
trnT-GGU	gene	translation-rna	+	32031	32103	72
psbD	gene	photosystem-ii	+	33406	34468	1062
psbC	gene	photosystem-ii	+	34415	35837	1422
trnS-UCA	gene	translation-rna	−	36079	36172	93
psbZ	gene	photosystem-ii	+	36492	36681	189
trnG-GCC	gene	translation-rna	+	36952	37023	71
trnfM-CAU	gene	translation-rna	−	37176	37250	74
rps14	gene	ribosomal-protein	−	37399	37702	303
psaB	gene	photosystem-i	−	37827	40032	2205
psaA	gene	photosystem-i	−	40057	42310	2253
ycf3	gene	other	−	42984	44897	1913
trnS-GGA	gene	translation-rna	+	45784	45871	87
rps4	gene	ribosomal-protein	−	46156	46762	606
trnT-UGU	gene	translation-rna	−	47100	47173	73
trnL-UAA	gene	translation-rna	+	47802	48371	569
trnF-GAA	gene	translation-rna	+	48675	48748	73
ndhJ	gene	nad-dehydrogenase	−	49402	49879	477
ndhK	gene	nad-dehydrogenase	−	49987	50665	678
ndhC	gene	nad-dehydrogenase	−	50717	51080	363
trnV-UAC	gene	translation-rna	−	52071	52724	653
trnM-CAU	gene	translation-rna	+	52904	52977	73
atpE	gene	atp-synthase	−	53186	53588	402
atpB	gene	atp-synthase	−	53584	55072	1488
rbcL	gene	other	+	55857	57300	1443
accD	gene	other	+	58029	59496	1467
psaI	gene	photosystem-i	+	60212	60323	111
ycf4	gene	other	+	60748	61303	555
cemA	gene	other	+	61988	62648	660
petA	gene	cytochrome	+	62854	63817	963
pabJ	gene	other	−	64840	64963	123
psbL	gene	photosystem-ii	−	65096	65213	117
psbF	gene	photosystem-ii	−	65236	65356	120
psbE	gene	photosystem-ii	−	65370	65622	252
petL	gene	cytochrome	+	66529	66625	96
petG	gene	cytochrome	+	66800	66914	114
trnW-CCA	gene	translation-rna	−	67032	67106	74
trnP-UGG	gene	translation-rna	−	67275	67349	74
psbJ	gene	photosystem-ii	+	67621	67756	135
rpl33	gene	ribosomal-protein	+	68227	68428	201
rps18	gene	ribosomal-protein	+	68602	68908	306
rpl20	gene	ribosomal-protein	−	69144	69531	387
rps12	gene	ribosomal-protein	−	70315	98462	28147
rps12	gene	ribosomal-protein	+	70315	139077	68762
clpP	gene	other	−	70583	72515	1932
psbB	gene	photosystem-ii	+	72988	74515	1527
psbT	gene	photosystem-ii	+	74706	74808	102
psbN	gene	photosystem-ii	−	74881	75013	132
psbH	gene	photosystem-ii	+	75116	75338	222
petB	gene	cytochrome	+	75462	76831	1369
petD	gene	cytochrome	+	77019	78221	1202
rpoA	gene	rna-polymerase	−	78383	79397	1014
rps11	gene	ribosomal-protein	−	79468	79885	417
rpl36	gene	ribosomal-protein	−	79986	80100	114
infA	gene	other	−	80195	80429	234
rps8	gene	ribosomal-protein	−	80548	80959	411
rpl14	gene	ribosomal-protein	−	81127	81496	369
rpl16	gene	ribosomal-protein	−	81622	82867	1245
rps3	gene	ribosomal-protein	−	83021	83684	663
rpl22	gene	ribosomal-protein	−	83685	84141	456
rps19	gene	ribosomal-protein	−	84200	84479	279
rpl2	gene	ribosomal-protein	−	84533	86016	1483
rpl23	gene	ribosomal-protein	−	86034	86316	282
trnI-CAU	gene	translation-rna	−	86475	86549	74
ycf2	gene	other	+	86637	93447	6810
ycf15	gene	other	+	93588	93786	198
trnL-CAA	gene	translation-rna	−	94041	94122	81
ndhB	gene	nad-dehydrogenase	−	94664	96876	2212
rps7	gene	ribosomal-protein	−	97150	97618	468
trnV-GAC	gene	translation-rna	+	100045	100117	72
rrn16	gene	ribosomal-rna	+	100344	101835	1491
trnI-GAU	gene	translation-rna	+	102133	103153	1020
trnA-UGC	gene	translation-rna	+	103218	104101	883
rrn23	gene	ribosomal-rna	+	104270	107083	2813
rrn4.5	gene	ribosomal-rna	+	107181	107284	103
rrn5	gene	ribosomal-rna	+	107531	107652	121
trnR-ACG	gene	translation-rna	+	107886	107960	74
trnN-GUU	gene	translation-rna	+	108507	108579	72
ndhF	gene	nad-dehydrogenase	−	109655	111896	2241
rpl32	gene	ribosomal-protein	+	112412	112589	177
trnL-UAG	gene	translation-rna	+	113015	113095	80
ccsA	gene	other	+	113191	114166	975
ndhD	gene	nad-dehydrogenase	−	114398	115919	1521
psaC	gene	photosystem-i	−	116020	116266	246
ndhE	gene	nad-dehydrogenase	−	116522	116828	306
ndhG	gene	nad-dehydrogenase	−	117037	117568	531
ndhI	gene	nad-dehydrogenase	−	117941	118433	492
ndhA	gene	nad-dehydrogenase	−	118513	120606	2093
ndhH	gene	nad-dehydrogenase	−	120607	121789	1182
rps15	gene	ribosomal-protein	−	121891	122164	273
ycf1	gene	other	−	122431	127840	5409
trnN-GUU	gene	translation-rna	+	128169	128241	72
trnR-ACG	gene	translation-rna	−	128788	128862	74
rrn5	gene	ribosomal-rna	−	129096	129217	121
rrn4.5	gene	ribosomal-rna	−	129464	129567	103
rrn23	gene	ribosomal-rna	−	129665	132478	2813
trnA-UGC	gene	translation-rna	−	132647	133530	883
trnI-GAU	gene	translation-rna	−	133595	134615	1020
rrn16	gene	ribosomal-rna	−	134913	136404	1491
trnV-GAC	gene	translation-rna	−	136631	136703	72
rps7	gene	ribosomal-protein	+	139130	139598	468
ndhB	gene	nad-dehydrogenase	+	139872	142084	2212
trnL-CAA	gene	translation-rna	+	142626	142707	81
ycf15	gene	other	−	142962	143160	198
ycf2	gene	other	−	143301	150111	6810
trnI-CAU	gene	translation-rna	+	150199	150273	74
rpl23	gene	ribosomal-protein	+	150432	150714	282
rpl2	gene	ribosomal-protein	+	150732	152215	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420972.1DNA · accDMW420972DNA · atpBMW420972DNA · matKMW420972DNA · ndhFMW420972DNA · psbAMW420972DNA · rbcLMW420972DNA · rps12MW420972DNA · ycf1MW420972