Coordinate-aware organelle record

Scutellaria brachyspica chloroplast genome

Available PQ075906.1 152,025 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	7	81	74
psbA	gene	photosystem-ii	−	350	1409	1059
trnK-UUU	gene	translation-rna	−	1650	4239	2589
matK	gene	other	−	1945	3481	1536
rps16	gene	ribosomal-protein	−	5120	6283	1163
trnQ-UUG	gene	translation-rna	−	7294	7366	72
psbK	gene	photosystem-ii	+	7690	7876	186
psbI	gene	photosystem-ii	+	8267	8378	111
trnS-GCU	gene	translation-rna	−	8495	8583	88
trnG-UCC	gene	translation-rna	+	9264	10025	761
trnR-UCU	gene	translation-rna	+	10195	10267	72
atpA	gene	atp-synthase	−	10363	11887	1524
atpF	gene	atp-synthase	−	11969	13197	1228
atpH	gene	atp-synthase	−	13552	13798	246
atpI	gene	atp-synthase	−	14789	15533	744
rps2	gene	ribosomal-protein	−	15881	16592	711
rpoC2	gene	rna-polymerase	−	16808	21014	4206
rpoC1	gene	rna-polymerase	−	21168	24001	2833
rpoB	gene	rna-polymerase	−	24027	27240	3213
trnC-GCA	gene	translation-rna	+	28410	28481	71
petN	gene	cytochrome	+	29192	29282	90
psbM	gene	photosystem-ii	−	30279	30384	105
trnD-GUC	gene	translation-rna	−	30910	30984	74
trnY-GUA	gene	translation-rna	−	31097	31181	84
trnE-UUC	gene	translation-rna	−	31240	31313	73
trnT-GGU	gene	translation-rna	+	31888	31960	72
psbD	gene	photosystem-ii	+	33266	34328	1062
psbC	gene	photosystem-ii	+	34275	35697	1422
trnS-UGA	gene	translation-rna	−	35933	36025	92
psbZ	gene	photosystem-ii	+	36344	36533	189
trnG-GCC	gene	translation-rna	+	36799	36870	71
trnfM-CAU	gene	translation-rna	−	37023	37097	74
rps14	gene	ribosomal-protein	−	37246	37549	303
psaB	gene	photosystem-i	−	37676	39881	2205
psaA	gene	photosystem-i	−	39906	42159	2253
ycf3	gene	other	−	42795	44718	1923
trnS-GGA	gene	translation-rna	+	45602	45689	87
rps4	gene	ribosomal-protein	−	45974	46580	606
trnT-UGU	gene	translation-rna	−	46922	46995	73
trnL-UAA	gene	translation-rna	+	47680	48242	562
trnF-GAA	gene	translation-rna	+	48548	48621	73
ndhJ	gene	nad-dehydrogenase	−	49269	49746	477
ndhK	gene	nad-dehydrogenase	−	49853	50531	678
ndhC	gene	nad-dehydrogenase	−	50583	50946	363
trnV-UAC	gene	translation-rna	−	51793	52446	653
trnM-CAU	gene	translation-rna	+	52626	52699	73
atpE	gene	atp-synthase	−	52908	53310	402
atpB	gene	atp-synthase	−	53306	54794	1488
rbcL	gene	other	+	55543	57007	1464
accD	gene	other	+	57740	59207	1467
psaI	gene	photosystem-i	+	59780	59891	111
ycf4	gene	other	+	60324	60879	555
cemA	gene	other	+	61616	62216	600
petA	gene	cytochrome	+	62422	63385	963
psbJ	gene	photosystem-ii	−	64419	64542	123
psbL	gene	photosystem-ii	−	64675	64792	117
psbF	gene	photosystem-ii	−	64815	64935	120
psbE	gene	photosystem-ii	−	64949	65201	252
petL	gene	cytochrome	+	66109	66205	96
petG	gene	cytochrome	+	66380	66494	114
trnW-CCA	gene	translation-rna	−	66612	66686	74
trnP-UGG	gene	translation-rna	−	66855	66929	74
psaJ	gene	photosystem-i	+	67201	67336	135
rpl33	gene	ribosomal-protein	+	67809	68010	201
rps18	gene	ribosomal-protein	+	68184	68490	306
rpl20	gene	ribosomal-protein	−	68727	69114	387
rps12	gene	ribosomal-protein	−	69902	98032	28130
rps12	gene	ribosomal-protein	+	69902	138803	68901
clpP	gene	other	−	70170	72102	1932
psbB	gene	photosystem-ii	+	72568	74095	1527
psbT	gene	photosystem-ii	+	74286	74388	102
psbN	gene	photosystem-ii	−	74461	74593	132
psbH	gene	photosystem-ii	+	74696	74918	222
petB	gene	cytochrome	+	75042	76410	1368
petD	gene	cytochrome	+	76598	77800	1202
rpoA	gene	rna-polymerase	−	77962	78976	1014
rps11	gene	ribosomal-protein	−	79047	79464	417
rpl36	gene	ribosomal-protein	−	79565	79679	114
infA	gene	other	−	79774	80008	234
rps8	gene	ribosomal-protein	−	80127	80538	411
rpl14	gene	ribosomal-protein	−	80708	81077	369
rpl16	gene	ribosomal-protein	−	81203	82437	1234
rps3	gene	ribosomal-protein	−	82591	83254	663
rpl22	gene	ribosomal-protein	−	83255	83711	456
rps19	gene	ribosomal-protein	−	83770	84049	279
rpl2	gene	ribosomal-protein	−	84103	85586	1483
rpl23	gene	ribosomal-protein	−	85604	85886	282
trnI-CAU	gene	translation-rna	−	86045	86119	74
ycf2	gene	other	+	86207	93017	6810
ycf15	gene	other	+	93158	93356	198
trnL-CAA	gene	translation-rna	−	93611	93692	81
ndhB	gene	nad-dehydrogenase	−	94234	96446	2212
rps7	gene	ribosomal-protein	−	96720	97188	468
trnV-GAC	gene	translation-rna	+	99609	99681	72
rrn16	gene	ribosomal-rna	+	99908	101399	1491
trnI-GAU	gene	translation-rna	+	101697	102718	1021
trnA-UGC	gene	translation-rna	+	102782	103666	884
rrn23	gene	ribosomal-rna	+	103835	106648	2813
rrn4.5	gene	ribosomal-rna	+	106746	106849	103
rrn5	gene	ribosomal-rna	+	107096	107217	121
trnR-ACG	gene	translation-rna	+	107451	107525	74
trnN-GUU	gene	translation-rna	−	108071	108143	72
ndhF	gene	nad-dehydrogenase	−	109219	111460	2241
rpl32	gene	ribosomal-protein	+	111981	112158	177
trnL-UAG	gene	translation-rna	+	112602	112682	80
ccsA	gene	other	+	112778	113753	975
ndhD	gene	nad-dehydrogenase	−	113985	115488	1503
psaC	gene	photosystem-i	−	115607	115853	246
ndhE	gene	nad-dehydrogenase	−	116109	116415	306
ndhG	gene	nad-dehydrogenase	−	116645	117176	531
ndhI	gene	nad-dehydrogenase	−	117540	118041	501
ndhA	gene	nad-dehydrogenase	−	118121	120213	2092
ndhH	gene	nad-dehydrogenase	−	120214	121396	1182
rps15	gene	ribosomal-protein	−	121498	121831	333
ycf1	gene	other	−	122037	127683	5646
trnN-GUU	gene	translation-rna	+	127901	127973	72
trnR-ACG	gene	translation-rna	−	128519	128593	74
rrn5	gene	ribosomal-rna	−	128827	128948	121
rrn4.5	gene	ribosomal-rna	−	129195	129298	103
rrn23	gene	ribosomal-rna	−	129396	132209	2813
trnA-UGC	gene	translation-rna	−	132378	133262	884
trnI-GAU	gene	translation-rna	−	133326	134347	1021
ycf68	gene	other	−	133952	134192	240
rrn16	gene	ribosomal-rna	−	134645	136136	1491
trnV-GAC	gene	translation-rna	−	136363	136435	72
rps7	gene	ribosomal-protein	+	138856	139324	468
ndhB	gene	nad-dehydrogenase	+	139598	141810	2212
trnL-CAA	gene	translation-rna	+	142352	142433	81
ycf15	gene	other	−	142688	142886	198
ycf2	gene	other	−	143027	149837	6810
trnI-CAU	gene	translation-rna	+	149925	149999	74
rpl23	gene	ribosomal-protein	+	150158	150440	282
rpl2	gene	ribosomal-protein	+	150458	151941	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075906.1DNA · accDPQ075906DNA · atpBPQ075906DNA · matKPQ075906DNA · ndhFPQ075906DNA · psbAPQ075906DNA · rbcLPQ075906DNA · rps12PQ075906DNA · ycf1PQ075906