Coordinate-aware organelle record

Scutellaria brevibracteata chloroplast genome

Available PQ059216.1 151,992 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	5	79	74
psbA	gene	photosystem-ii	−	396	1455	1059
trnK-UUU	gene	translation-rna	−	1696	4289	2593
matK	gene	other	−	1985	3530	1545
rps16	gene	ribosomal-protein	−	5204	6377	1173
trnQ-UUG	gene	translation-rna	−	7489	7561	72
psbK	gene	photosystem-ii	+	7885	8071	186
psbI	gene	photosystem-ii	+	8468	8579	111
trnS-GCU	gene	translation-rna	−	8677	8765	88
trnG-UCC	gene	translation-rna	+	9459	10214	755
trnR-UCU	gene	translation-rna	+	10379	10451	72
atpA	gene	atp-synthase	−	10547	12071	1524
atpF	gene	atp-synthase	−	12155	13385	1230
atpH	gene	atp-synthase	−	13755	14001	246
atpI	gene	atp-synthase	−	14994	15738	744
rps2	gene	ribosomal-protein	−	16085	16796	711
rpoC2	gene	rna-polymerase	−	17013	21213	4200
rpoC1	gene	rna-polymerase	−	21367	24186	2819
rpoB	gene	rna-polymerase	−	24212	27425	3213
trnC-GCA	gene	translation-rna	+	28607	28678	71
petN	gene	cytochrome	+	29413	29503	90
psbM	gene	photosystem-ii	−	30511	30616	105
trnD-GUC	gene	translation-rna	−	31147	31221	74
trnY-GUA	gene	translation-rna	−	31334	31418	84
trnE-UUC	gene	translation-rna	−	31477	31550	73
trnT-GGU	gene	translation-rna	+	32121	32193	72
psbD	gene	photosystem-ii	+	33509	34571	1062
psbC	gene	photosystem-ii	+	34518	35940	1422
trnS-UGA	gene	translation-rna	−	36174	36266	92
psbZ	gene	photosystem-ii	+	36585	36774	189
trnG-GCC	gene	translation-rna	+	37046	37117	71
trnfM-CAU	gene	translation-rna	−	37261	37335	74
rps14	gene	ribosomal-protein	−	37484	37787	303
psaB	gene	photosystem-i	−	37916	40121	2205
psaA	gene	photosystem-i	−	40146	42399	2253
ycf3	gene	other	−	43096	45019	1923
trnS-GGA	gene	translation-rna	+	45892	45979	87
rps4	gene	ribosomal-protein	−	46262	46868	606
trnT-UGU	gene	translation-rna	−	47207	47280	73
trnL-UAA	gene	translation-rna	+	47942	48509	567
trnF-GAA	gene	translation-rna	+	48814	48887	73
ndhJ	gene	nad-dehydrogenase	−	49536	50013	477
ndhK	gene	nad-dehydrogenase	−	50117	50795	678
ndhC	gene	nad-dehydrogenase	−	50847	51210	363
trnV-UAC	gene	translation-rna	−	52198	52857	659
trnM-CAU	gene	translation-rna	+	53037	53110	73
atpE	gene	atp-synthase	−	53318	53720	402
atpB	gene	atp-synthase	−	53716	55213	1497
rbcL	gene	other	+	55960	57424	1464
accD	gene	other	+	58149	59640	1491
psaI	gene	photosystem-i	+	59877	59988	111
ycf4	gene	other	+	60421	60976	555
cemA	gene	other	+	61589	62189	600
petA	gene	cytochrome	+	62395	63358	963
psbJ	gene	photosystem-ii	−	64380	64503	123
psbL	gene	photosystem-ii	−	64636	64858	222
psbF	gene	photosystem-ii	−	64776	64896	120
psbE	gene	photosystem-ii	−	64910	65162	252
petL	gene	cytochrome	+	66083	66179	96
petG	gene	cytochrome	+	66354	66468	114
trnW-CCA	gene	translation-rna	−	66576	66650	74
trnP-UGG	gene	translation-rna	−	66819	66893	74
psaJ	gene	photosystem-i	+	67165	67300	135
rpl33	gene	ribosomal-protein	+	67768	67969	201
rps18	gene	ribosomal-protein	+	68143	68449	306
rpl20	gene	ribosomal-protein	−	68689	69076	387
rps12	gene	ribosomal-protein	−	69859	97975	28116
rps12	gene	ribosomal-protein	+	69859	138755	68896
clpP	gene	other	−	70126	72063	1937
psbB	gene	photosystem-ii	+	72516	74043	1527
psbT	gene	photosystem-ii	+	74222	74330	108
psbN	gene	photosystem-ii	−	74390	74522	132
psbH	gene	photosystem-ii	+	74625	74847	222
petB	gene	cytochrome	+	74971	76340	1369
petD	gene	cytochrome	+	76528	77746	1218
rpoA	gene	rna-polymerase	−	77908	78922	1014
rps11	gene	ribosomal-protein	−	78993	79410	417
rpl36	gene	ribosomal-protein	−	79511	79625	114
infA	gene	other	−	79720	79954	234
rps8	gene	ribosomal-protein	−	80076	80487	411
rpl14	gene	ribosomal-protein	−	80648	81017	369
rpl16	gene	ribosomal-protein	−	81143	82374	1231
rps3	gene	ribosomal-protein	−	82528	83191	663
rpl22	gene	ribosomal-protein	−	83192	83648	456
rps19	gene	ribosomal-protein	−	83707	83986	279
rpl2	gene	ribosomal-protein	−	84041	85524	1483
rpl23	gene	ribosomal-protein	−	85542	85824	282
trnI-CAU	gene	translation-rna	−	85983	86057	74
ycf2	gene	other	+	86145	92955	6810
ycf15	gene	other	+	93045	93294	249
trnL-CAA	gene	translation-rna	−	93554	93635	81
ndhB	gene	nad-dehydrogenase	−	94177	96335	2158
rps7	gene	ribosomal-protein	−	96663	97131	468
trnV-GAC	gene	translation-rna	+	99547	99619	72
rrn16	gene	ribosomal-rna	+	99841	101332	1491
trnI-GAU	gene	translation-rna	+	101630	102649	1019
trnA-UGC	gene	translation-rna	+	102713	103601	888
rrn23	gene	ribosomal-rna	+	103770	106582	2812
rrn4.5	gene	ribosomal-rna	+	106680	106783	103
rrn5	gene	ribosomal-rna	+	107030	107151	121
trnR-ACG	gene	translation-rna	+	107385	107459	74
trnN-GUU	gene	translation-rna	−	108014	108086	72
ndhF	gene	nad-dehydrogenase	−	109162	111403	2241
rpl32	gene	ribosomal-protein	+	111917	112094	177
trnL-UAG	gene	translation-rna	+	112528	112608	80
ccsA	gene	other	+	112690	113665	975
ndhD	gene	nad-dehydrogenase	−	113902	115432	1530
psaC	gene	photosystem-i	−	115539	115785	246
ndhE	gene	nad-dehydrogenase	−	116040	116346	306
ndhG	gene	nad-dehydrogenase	−	116569	117100	531
ndhI	gene	nad-dehydrogenase	−	117448	117949	501
ndhA	gene	nad-dehydrogenase	−	118029	120139	2110
ndhH	gene	nad-dehydrogenase	−	120140	121352	1212
rps15	gene	ribosomal-protein	−	121418	121691	273
ycf1	gene	other	−	121959	127635	5676
trnN-GUU	gene	translation-rna	+	127853	127925	72
trnR-ACG	gene	translation-rna	−	128480	128554	74
rrn5	gene	ribosomal-rna	−	128788	128909	121
rrn4.5	gene	ribosomal-rna	−	129156	129259	103
rrn23	gene	ribosomal-rna	−	129357	132169	2812
trnA-UGC	gene	translation-rna	−	132338	133226	888
trnI-GAU	gene	translation-rna	−	133290	134309	1019
ycf68	gene	other	−	133860	134154	294
rrn16	gene	ribosomal-rna	−	134607	136098	1491
trnV-GAC	gene	translation-rna	−	136320	136392	72
rps7	gene	ribosomal-protein	+	138808	139276	468
ndhB	gene	nad-dehydrogenase	+	139604	141762	2158
trnL-CAA	gene	translation-rna	+	142304	142385	81
ycf15	gene	other	−	142645	142894	249
ycf2	gene	other	−	142984	149794	6810
trnI-CAU	gene	translation-rna	+	149882	149956	74
rpl23	gene	ribosomal-protein	+	150115	150397	282
rpl2	gene	ribosomal-protein	+	150415	151898	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059216.1DNA · accDPQ059216DNA · atpBPQ059216DNA · matKPQ059216DNA · ndhFPQ059216DNA · psbAPQ059216DNA · rbcLPQ059216DNA · rps12PQ059216DNA · ycf1PQ059216