Coordinate-aware organelle record

Scutellaria caudifolia var. obliquifolia chloroplast genome

Available PQ075908.1 152,006 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1959	3495	1536
rps16	gene	ribosomal-protein	−	5134	6307	1173
trnQ-UUG	gene	translation-rna	−	7326	7398	72
psbK	gene	photosystem-ii	+	7722	7908	186
psbI	gene	photosystem-ii	+	8300	8411	111
trnS-GCU	gene	translation-rna	−	8519	8607	88
trnG-UCC	gene	translation-rna	+	9288	10049	761
trnR-UCU	gene	translation-rna	+	10219	10291	72
atpA	gene	atp-synthase	−	10387	11911	1524
atpF	gene	atp-synthase	−	11993	13221	1228
atpH	gene	atp-synthase	−	13576	13822	246
atpI	gene	atp-synthase	−	14817	15561	744
rps2	gene	ribosomal-protein	−	15909	16746	837
rpoC2	gene	rna-polymerase	−	16836	21042	4206
rpoC1	gene	rna-polymerase	−	21196	24026	2830
rpoB	gene	rna-polymerase	−	24052	27265	3213
trnC-GCA	gene	translation-rna	+	28434	28505	71
petN	gene	cytochrome	+	29216	29306	90
psbM	gene	photosystem-ii	−	30298	30403	105
trnD-GUC	gene	translation-rna	−	30929	31003	74
trnY-GUA	gene	translation-rna	−	31116	31200	84
trnE-UUC	gene	translation-rna	−	31259	31332	73
trnT-GGU	gene	translation-rna	+	31907	31979	72
psbD	gene	photosystem-ii	+	33285	34347	1062
psbC	gene	photosystem-ii	+	34294	35716	1422
trnS-UGA	gene	translation-rna	−	35952	36044	92
psbZ	gene	photosystem-ii	+	36363	36552	189
trnG-GCC	gene	translation-rna	+	36823	36894	71
trnfM-CAU	gene	translation-rna	−	37048	37122	74
rps14	gene	ribosomal-protein	−	37271	37574	303
psaB	gene	photosystem-i	−	37701	39906	2205
psaA	gene	photosystem-i	−	39931	42184	2253
ycf3	gene	other	−	42842	44766	1924
trnS-GGA	gene	translation-rna	+	45650	45737	87
rps4	gene	ribosomal-protein	−	46013	46619	606
trnT-UGU	gene	translation-rna	−	46960	47033	73
trnL-UAA	gene	translation-rna	+	47718	48279	561
trnF-GAA	gene	translation-rna	+	48585	48658	73
ndhJ	gene	nad-dehydrogenase	−	49306	49783	477
ndhK	gene	nad-dehydrogenase	−	49890	50568	678
ndhC	gene	nad-dehydrogenase	−	50620	50983	363
trnV-UAC	gene	translation-rna	−	51844	52497	653
trnM-CAU	gene	translation-rna	+	52677	52750	73
atpE	gene	atp-synthase	−	52965	53367	402
atpB	gene	atp-synthase	−	53363	54851	1488
rbcL	gene	other	+	55600	57064	1464
accD	gene	other	+	57797	59264	1467
psaI	gene	photosystem-i	+	59829	59940	111
ycf4	gene	other	+	60373	60928	555
cemA	gene	other	+	61666	62266	600
petA	gene	cytochrome	+	62472	63435	963
psbJ	gene	photosystem-ii	−	64468	64591	123
psbL	gene	photosystem-ii	−	64724	64841	117
psbF	gene	photosystem-ii	−	64864	64984	120
psbE	gene	photosystem-ii	−	64998	65250	252
petL	gene	cytochrome	+	66158	66254	96
petG	gene	cytochrome	+	66429	66543	114
trnW-CCA	gene	translation-rna	−	66661	66735	74
trnP-UGG	gene	translation-rna	−	66928	67002	74
psaJ	gene	photosystem-i	+	67274	67409	135
rpl33	gene	ribosomal-protein	+	67882	68083	201
rps18	gene	ribosomal-protein	+	68257	68563	306
rpl20	gene	ribosomal-protein	−	68799	69186	387
rps12	gene	ribosomal-protein	−	69974	98107	28133
rps12	gene	ribosomal-protein	+	69974	138773	68799
clpP	gene	other	−	70243	72176	1933
psbB	gene	photosystem-ii	+	72642	74169	1527
psbT	gene	photosystem-ii	+	74360	74462	102
psbN	gene	photosystem-ii	−	74535	74667	132
psbH	gene	photosystem-ii	+	74770	74992	222
petB	gene	cytochrome	+	75116	76485	1369
petD	gene	cytochrome	+	76673	77875	1202
rpoA	gene	rna-polymerase	−	78037	79051	1014
rps11	gene	ribosomal-protein	−	79122	79539	417
rpl36	gene	ribosomal-protein	−	79640	79754	114
infA	gene	other	−	79849	80083	234
rps8	gene	ribosomal-protein	−	80202	80613	411
rpl14	gene	ribosomal-protein	−	80783	81152	369
rpl16	gene	ribosomal-protein	−	81278	82512	1234
rps3	gene	ribosomal-protein	−	82666	83329	663
rpl22	gene	ribosomal-protein	−	83330	83786	456
rps19	gene	ribosomal-protein	−	83845	84124	279
rpl2	gene	ribosomal-protein	−	84178	85661	1483
rpl23	gene	ribosomal-protein	−	85679	85961	282
trnI-CAU	gene	translation-rna	−	86120	86194	74
ycf2	gene	other	+	86282	93092	6810
ycf15	gene	other	+	93182	93431	249
trnL-CAA	gene	translation-rna	−	93686	93767	81
ndhB	gene	nad-dehydrogenase	−	94309	96467	2158
rps7	gene	ribosomal-protein	−	96795	97263	468
trnV-GAC	gene	translation-rna	+	99684	99756	72
rrn16	gene	ribosomal-rna	+	99983	101474	1491
trnI-GAU	gene	translation-rna	+	101772	102793	1021
trnA-UGC	gene	translation-rna	+	102857	103741	884
rrn23	gene	ribosomal-rna	+	103910	106723	2813
rrn4.5	gene	ribosomal-rna	+	106821	106924	103
rrn5	gene	ribosomal-rna	+	107171	107292	121
trnR-ACG	gene	translation-rna	+	107526	107600	74
trnN-GUU	gene	translation-rna	−	108146	108218	72
ndhF	gene	nad-dehydrogenase	−	109294	111535	2241
rpl32	gene	ribosomal-protein	+	112055	112232	177
trnL-UAG	gene	translation-rna	+	112676	112756	80
ccsA	gene	other	+	112852	113827	975
ndhD	gene	nad-dehydrogenase	−	114059	115583	1524
psaC	gene	photosystem-i	−	115681	115927	246
ndhE	gene	nad-dehydrogenase	−	116183	116489	306
ndhG	gene	nad-dehydrogenase	−	116719	117250	531
ndhI	gene	nad-dehydrogenase	−	117614	118115	501
ndhA	gene	nad-dehydrogenase	−	118195	120288	2093
ndhH	gene	nad-dehydrogenase	−	120289	121471	1182
rps15	gene	ribosomal-protein	−	121573	121846	273
ycf1	gene	other	−	122106	127653	5547
trnN-GUU	gene	translation-rna	+	127871	127943	72
trnR-ACG	gene	translation-rna	−	128489	128563	74
rrn5	gene	ribosomal-rna	−	128797	128918	121
rrn4.5	gene	ribosomal-rna	−	129165	129268	103
rrn23	gene	ribosomal-rna	−	129366	132179	2813
trnA-UGC	gene	translation-rna	−	132348	133232	884
trnI-GAU	gene	translation-rna	−	133296	134317	1021
ycf68	gene	other	−	133922	134162	240
rrn16	gene	ribosomal-rna	−	134615	136106	1491
trnV-GAC	gene	translation-rna	−	136333	136405	72
rps7	gene	ribosomal-protein	+	138826	139294	468
ndhB	gene	nad-dehydrogenase	+	139622	141780	2158
trnL-CAA	gene	translation-rna	+	142322	142403	81
ycf15	gene	other	−	142658	142907	249
ycf2	gene	other	−	142997	149807	6810
trnI-CAU	gene	translation-rna	+	149895	149969	74
rpl23	gene	ribosomal-protein	+	150128	150410	282
rpl2	gene	ribosomal-protein	+	150428	151911	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075908.1DNA · accDPQ075908DNA · atpBPQ075908DNA · matKPQ075908DNA · ndhFPQ075908DNA · psbAPQ075908DNA · rbcLPQ075908DNA · rps12PQ075908DNA · ycf1PQ075908