Coordinate-aware organelle record

Scutellaria caudifolia chloroplast genome

Available PQ075911.1 152,329 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	238	1297	1059
trnK-UUU	gene	translation-rna	−	1538	4126	2588
matK	gene	other	−	1833	3369	1536
rps16	gene	ribosomal-protein	−	5015	6175	1160
trnQ-UUG	gene	translation-rna	−	7277	7349	72
psbK	gene	photosystem-ii	+	7673	7859	186
psbI	gene	photosystem-ii	+	8250	8361	111
trnS-GCU	gene	translation-rna	−	8481	8569	88
trnG-UCC	gene	translation-rna	+	9270	10040	770
trnR-UCU	gene	translation-rna	+	10214	10286	72
atpA	gene	atp-synthase	−	10382	11906	1524
atpF	gene	atp-synthase	−	11988	13216	1228
atpH	gene	atp-synthase	−	13574	13820	246
atpI	gene	atp-synthase	−	14815	15559	744
rps2	gene	ribosomal-protein	−	15906	16617	711
rpoC2	gene	rna-polymerase	−	16833	21039	4206
rpoC1	gene	rna-polymerase	−	21193	24023	2830
rpoB	gene	rna-polymerase	−	24049	27262	3213
trnC-GCA	gene	translation-rna	+	28421	28492	71
petN	gene	cytochrome	+	29194	29284	90
psbM	gene	photosystem-ii	−	30339	30444	105
trnD-GUC	gene	translation-rna	−	30970	31044	74
trnY-GUA	gene	translation-rna	−	31157	31241	84
trnE-UUC	gene	translation-rna	−	31300	31373	73
trnT-GGU	gene	translation-rna	+	31955	32027	72
psbD	gene	photosystem-ii	+	33238	34300	1062
psbC	gene	photosystem-ii	+	34247	35669	1422
trnS-UGA	gene	translation-rna	−	35905	35997	92
psbZ	gene	photosystem-ii	+	36317	36506	189
trnG-GCC	gene	translation-rna	+	36777	36848	71
trnfM-CAU	gene	translation-rna	−	37014	37088	74
rps14	gene	ribosomal-protein	−	37237	37540	303
psaB	gene	photosystem-i	−	37667	39872	2205
psaA	gene	photosystem-i	−	39897	42150	2253
ycf3	gene	other	−	42838	44762	1924
trnS-GGA	gene	translation-rna	+	45653	45740	87
rps4	gene	ribosomal-protein	−	46025	46631	606
trnT-UGU	gene	translation-rna	−	46961	47034	73
trnL-UAA	gene	translation-rna	+	47718	48279	561
trnF-GAA	gene	translation-rna	+	48584	48657	73
ndhJ	gene	nad-dehydrogenase	−	49301	49778	477
ndhK	gene	nad-dehydrogenase	−	49885	50563	678
ndhC	gene	nad-dehydrogenase	−	50615	50978	363
trnV-UAC	gene	translation-rna	−	51974	52627	653
trnM-CAU	gene	translation-rna	+	52808	52881	73
atpE	gene	atp-synthase	−	53096	53498	402
atpB	gene	atp-synthase	−	53494	54982	1488
rbcL	gene	other	+	55733	57197	1464
accD	gene	other	+	57918	59385	1467
psaI	gene	photosystem-i	+	60101	60212	111
ycf4	gene	other	+	60645	61200	555
cemA	gene	other	+	61942	62542	600
petA	gene	cytochrome	+	62748	63711	963
psbJ	gene	photosystem-ii	−	64714	64837	123
psbL	gene	photosystem-ii	−	64970	65192	222
psbF	gene	photosystem-ii	−	65110	65230	120
psbE	gene	photosystem-ii	−	65244	65496	252
petL	gene	cytochrome	+	66391	66487	96
petG	gene	cytochrome	+	66662	66776	114
trnW-CCA	gene	translation-rna	−	66894	66968	74
trnP-UGG	gene	translation-rna	−	67137	67211	74
psaJ	gene	photosystem-i	+	67483	67618	135
rpl33	gene	ribosomal-protein	+	68094	68295	201
rps18	gene	ribosomal-protein	+	68474	68780	306
rpl20	gene	ribosomal-protein	−	68996	69404	408
rps12	gene	ribosomal-protein	−	70192	98355	28163
rps12	gene	ribosomal-protein	+	70192	139096	68904
clpP	gene	other	−	70460	72392	1932
psbB	gene	photosystem-ii	+	72865	74392	1527
psbT	gene	photosystem-ii	+	74583	74685	102
psbN	gene	photosystem-ii	−	74758	74890	132
psbH	gene	photosystem-ii	+	74993	75215	222
petB	gene	cytochrome	+	75339	76718	1379
petD	gene	cytochrome	+	76906	78108	1202
rpoA	gene	rna-polymerase	−	78270	79284	1014
rps11	gene	ribosomal-protein	−	79355	79772	417
rpl36	gene	ribosomal-protein	−	79873	79987	114
infA	gene	other	−	80082	80316	234
rps8	gene	ribosomal-protein	−	80434	80845	411
rpl14	gene	ribosomal-protein	−	81012	81381	369
rpl16	gene	ribosomal-protein	−	81507	82760	1253
rps3	gene	ribosomal-protein	−	82914	83577	663
rpl22	gene	ribosomal-protein	−	83578	84034	456
rps19	gene	ribosomal-protein	−	84093	84372	279
rpl2	gene	ribosomal-protein	−	84426	85909	1483
rpl23	gene	ribosomal-protein	−	85927	86209	282
trnI-CAU	gene	translation-rna	−	86368	86442	74
ycf2	gene	other	+	86530	93340	6810
ycf15	gene	other	+	93481	93679	198
trnL-CAA	gene	translation-rna	−	93934	94015	81
ndhB	gene	nad-dehydrogenase	−	94557	96769	2212
rps7	gene	ribosomal-protein	−	97043	97511	468
trnV-GAC	gene	translation-rna	+	99932	100004	72
rrn16	gene	ribosomal-rna	+	100231	101722	1491
trnI-GAU	gene	translation-rna	+	102020	103032	1012
trnA-UGC	gene	translation-rna	+	103096	103977	881
rrn23	gene	ribosomal-rna	+	104146	106959	2813
rrn4.5	gene	ribosomal-rna	+	107057	107160	103
rrn5	gene	ribosomal-rna	+	107407	107528	121
trnR-ACG	gene	translation-rna	+	107762	107836	74
trnN-GUU	gene	translation-rna	−	108382	108454	72
ndhF	gene	nad-dehydrogenase	−	109530	111771	2241
rpl32	gene	ribosomal-protein	+	112292	112469	177
trnL-UAG	gene	translation-rna	+	112914	112994	80
ccsA	gene	other	+	113077	114052	975
ndhD	gene	nad-dehydrogenase	−	114284	115808	1524
psaC	gene	photosystem-i	−	115906	116152	246
ndhE	gene	nad-dehydrogenase	−	116408	116714	306
ndhG	gene	nad-dehydrogenase	−	116944	117475	531
ndhI	gene	nad-dehydrogenase	−	117839	118340	501
ndhA	gene	nad-dehydrogenase	−	118420	120519	2099
ndhH	gene	nad-dehydrogenase	−	120520	121732	1212
rps15	gene	ribosomal-protein	−	121804	122077	273
ycf1	gene	other	−	122342	127988	5646
trnN-GUU	gene	translation-rna	+	128206	128278	72
trnR-ACG	gene	translation-rna	−	128824	128898	74
rrn5	gene	ribosomal-rna	−	129132	129253	121
rrn4.5	gene	ribosomal-rna	−	129500	129603	103
rrn23	gene	ribosomal-rna	−	129701	132514	2813
trnA-UGC	gene	translation-rna	−	132683	133564	881
trnI-GAU	gene	translation-rna	−	133628	134640	1012
ycf68	gene	other	−	134245	134485	240
rrn16	gene	ribosomal-rna	−	134938	136429	1491
trnV-GAC	gene	translation-rna	−	136656	136728	72
rps7	gene	ribosomal-protein	+	139149	139617	468
ndhB	gene	nad-dehydrogenase	+	139891	142103	2212
trnL-CAA	gene	translation-rna	+	142645	142726	81
ycf15	gene	other	−	142981	143179	198
ycf2	gene	other	−	143320	150130	6810
trnI-CAU	gene	translation-rna	+	150218	150292	74
rpl23	gene	ribosomal-protein	+	150451	150733	282
rpl2	gene	ribosomal-protein	+	150751	152234	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ075911.1DNA · accDPQ075911DNA · atpBPQ075911DNA · matKPQ075911DNA · ndhFPQ075911DNA · psbAPQ075911DNA · rbcLPQ075911DNA · rps12PQ075911DNA · ycf1PQ075911