Coordinate-aware organelle record

Scutellaria columnae chloroplast genome

Available PQ059198.1 151,919 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	390	1449	1059
trnK-UUU	gene	translation-rna	−	1690	4284	2594
matK	gene	other	−	1979	3524	1545
rps16	gene	ribosomal-protein	−	5190	6363	1173
trnQ-UUG	gene	translation-rna	−	7470	7542	72
psbK	gene	photosystem-ii	+	7866	8052	186
psbI	gene	photosystem-ii	+	8450	8561	111
trnS-GCU	gene	translation-rna	−	8661	8749	88
trnG-UCC	gene	translation-rna	+	9441	10196	755
trnR-UCU	gene	translation-rna	+	10361	10433	72
atpA	gene	atp-synthase	−	10529	12053	1524
atpF	gene	atp-synthase	−	12136	13365	1229
atpH	gene	atp-synthase	−	13733	13979	246
atpI	gene	atp-synthase	−	14972	15716	744
rps2	gene	ribosomal-protein	−	16063	16774	711
rpoC2	gene	rna-polymerase	−	16991	21191	4200
rpoC1	gene	rna-polymerase	−	21345	24164	2819
rpoB	gene	rna-polymerase	−	24190	27403	3213
trnC-GCA	gene	translation-rna	+	28579	28650	71
petN	gene	cytochrome	+	29385	29475	90
psbM	gene	photosystem-ii	−	30482	30587	105
trnD-GUC	gene	translation-rna	−	31118	31192	74
trnY-GUA	gene	translation-rna	−	31305	31389	84
trnE-UUC	gene	translation-rna	−	31448	31521	73
trnT-GGU	gene	translation-rna	+	32092	32164	72
psbD	gene	photosystem-ii	+	33487	34549	1062
psbC	gene	photosystem-ii	+	34496	35918	1422
trnS-UGA	gene	translation-rna	−	36152	36244	92
psbZ	gene	photosystem-ii	+	36563	36752	189
trnG-GCC	gene	translation-rna	+	37024	37095	71
trnfM-CAU	gene	translation-rna	−	37239	37313	74
rps14	gene	ribosomal-protein	−	37462	37765	303
psaB	gene	photosystem-i	−	37894	40099	2205
psaA	gene	photosystem-i	−	40124	42377	2253
ycf3	gene	other	−	43076	45003	1927
trnS-GGA	gene	translation-rna	+	45878	45965	87
rps4	gene	ribosomal-protein	−	46248	46854	606
trnT-UGU	gene	translation-rna	−	47193	47266	73
trnL-UAA	gene	translation-rna	+	47933	48500	567
trnF-GAA	gene	translation-rna	+	48805	48878	73
ndhJ	gene	nad-dehydrogenase	−	49527	50004	477
ndhK	gene	nad-dehydrogenase	−	50108	50786	678
ndhC	gene	nad-dehydrogenase	−	50838	51201	363
trnV-UAC	gene	translation-rna	−	52189	52848	659
trnM-CAU	gene	translation-rna	+	53028	53101	73
atpE	gene	atp-synthase	−	53309	53711	402
atpB	gene	atp-synthase	−	53707	55204	1497
rbcL	gene	other	+	55950	57414	1464
accD	gene	other	+	58139	59630	1491
psaI	gene	photosystem-i	+	59868	59979	111
ycf4	gene	other	+	60412	60967	555
cemA	gene	other	+	61580	62180	600
petA	gene	cytochrome	+	62386	63349	963
psbJ	gene	photosystem-ii	−	64370	64493	123
psbL	gene	photosystem-ii	−	64626	64743	117
psbF	gene	photosystem-ii	−	64766	64886	120
psbE	gene	photosystem-ii	−	64900	65152	252
petL	gene	cytochrome	+	66075	66171	96
petG	gene	cytochrome	+	66346	66460	114
trnW-CCA	gene	translation-rna	−	66568	66642	74
trnP-UGG	gene	translation-rna	−	66811	66885	74
psaJ	gene	photosystem-i	+	67157	67292	135
rpl33	gene	ribosomal-protein	+	67765	67966	201
rps18	gene	ribosomal-protein	+	68140	68446	306
rpl20	gene	ribosomal-protein	−	68686	69073	387
rps12	gene	ribosomal-protein	−	69870	97960	28090
rps12	gene	ribosomal-protein	+	69870	138678	68808
clpP	gene	other	−	70125	72061	1936
psbB	gene	photosystem-ii	+	72514	74041	1527
psbT	gene	photosystem-ii	+	74221	74329	108
psbN	gene	photosystem-ii	−	74388	74520	132
psbH	gene	photosystem-ii	+	74623	74845	222
petB	gene	cytochrome	+	74969	76338	1369
petD	gene	cytochrome	+	76526	77728	1202
rpoA	gene	rna-polymerase	−	77890	78904	1014
rps11	gene	ribosomal-protein	−	78975	79392	417
rpl36	gene	ribosomal-protein	−	79493	79607	114
infA	gene	other	−	79702	79936	234
rps8	gene	ribosomal-protein	−	80058	80469	411
rpl14	gene	ribosomal-protein	−	80633	81002	369
rpl16	gene	ribosomal-protein	−	81128	82359	1231
rps3	gene	ribosomal-protein	−	82513	83176	663
rpl22	gene	ribosomal-protein	−	83177	83633	456
rps19	gene	ribosomal-protein	−	83692	83971	279
rpl2	gene	ribosomal-protein	−	84026	85509	1483
rpl23	gene	ribosomal-protein	−	85527	85809	282
trnI-CAU	gene	translation-rna	−	85968	86042	74
ycf2	gene	other	+	86130	92940	6810
ycf15	gene	other	+	93030	93279	249
trnL-CAA	gene	translation-rna	−	93539	93620	81
ndhB	gene	nad-dehydrogenase	−	94162	96320	2158
rps7	gene	ribosomal-protein	−	96648	97116	468
trnV-GAC	gene	translation-rna	+	99533	99605	72
rrn16	gene	ribosomal-rna	+	99827	101318	1491
trnI-GAU	gene	translation-rna	+	101616	102635	1019
trnA-UGC	gene	translation-rna	+	102699	103589	890
rrn23	gene	ribosomal-rna	+	103758	106570	2812
rrn4.5	gene	ribosomal-rna	+	106668	106771	103
rrn5	gene	ribosomal-rna	+	107018	107139	121
trnR-ACG	gene	translation-rna	+	107373	107447	74
trnN-GUU	gene	translation-rna	−	108002	108074	72
ndhF	gene	nad-dehydrogenase	−	109150	111391	2241
rpl32	gene	ribosomal-protein	+	111904	112081	177
trnL-UAG	gene	translation-rna	+	112470	112550	80
ccsA	gene	other	+	112634	113609	975
ndhD	gene	nad-dehydrogenase	−	113846	115349	1503
psaC	gene	photosystem-i	−	115483	115729	246
ndhE	gene	nad-dehydrogenase	−	115984	116290	306
ndhG	gene	nad-dehydrogenase	−	116503	117034	531
ndhI	gene	nad-dehydrogenase	−	117382	117883	501
ndhA	gene	nad-dehydrogenase	−	117963	120065	2102
ndhH	gene	nad-dehydrogenase	−	120066	121248	1182
rps15	gene	ribosomal-protein	−	121344	121617	273
ycf1	gene	other	−	121885	127555	5670
trnN-GUU	gene	translation-rna	+	127773	127845	72
trnR-ACG	gene	translation-rna	−	128400	128474	74
rrn5	gene	ribosomal-rna	−	128708	128829	121
rrn4.5	gene	ribosomal-rna	−	129076	129179	103
rrn23	gene	ribosomal-rna	−	129277	132089	2812
trnA-UGC	gene	translation-rna	−	132258	133148	890
trnI-GAU	gene	translation-rna	−	133212	134231	1019
ycf68	gene	other	−	133782	134076	294
rrn16	gene	ribosomal-rna	−	134529	136020	1491
trnV-GAC	gene	translation-rna	−	136242	136314	72
rps7	gene	ribosomal-protein	+	138731	139199	468
ndhB	gene	nad-dehydrogenase	+	139527	141685	2158
trnL-CAA	gene	translation-rna	+	142227	142308	81
ycf15	gene	other	−	142568	142817	249
ycf2	gene	other	−	142907	149717	6810
trnI-CAU	gene	translation-rna	+	149805	149879	74
rpl23	gene	ribosomal-protein	+	150038	150320	282
rpl2	gene	ribosomal-protein	+	150338	151821	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059198.1DNA · accDPQ059198DNA · atpBPQ059198DNA · matKPQ059198DNA · ndhFPQ059198DNA · psbAPQ059198DNA · rbcLPQ059198DNA · rps12PQ059198DNA · ycf1PQ059198