Coordinate-aware organelle record

Scutellaria cordifrons chloroplast genome

Available PQ058242.1 152,207 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	4	78	74
psbA	gene	photosystem-ii	−	388	1447	1059
trnK-UUU	gene	translation-rna	−	1680	4265	2585
matK	gene	other	−	1970	3497	1527
rps16	gene	ribosomal-protein	−	5164	6322	1158
trnQ-UUG	gene	translation-rna	−	7452	7524	72
psbK	gene	photosystem-ii	+	7848	8034	186
psbI	gene	photosystem-ii	+	8422	8533	111
trnS-GCU	gene	translation-rna	−	8652	8740	88
trnG-UCC	gene	translation-rna	+	9437	10194	757
trnR-UCU	gene	translation-rna	+	10368	10440	72
atpA	gene	atp-synthase	−	10536	12060	1524
atpF	gene	atp-synthase	−	12140	13371	1231
atpH	gene	atp-synthase	−	13731	13977	246
atpI	gene	atp-synthase	−	14965	15709	744
rps2	gene	ribosomal-protein	−	16054	16765	711
rpoC2	gene	rna-polymerase	−	16980	21186	4206
rpoC1	gene	rna-polymerase	−	21340	24168	2828
rpoB	gene	rna-polymerase	−	24194	27407	3213
trnC-GCA	gene	translation-rna	+	28567	28638	71
petN	gene	cytochrome	+	29354	29444	90
psbM	gene	photosystem-ii	−	30470	30575	105
trnD-GUC	gene	translation-rna	−	31100	31174	74
trnY-GUA	gene	translation-rna	−	31287	31371	84
trnE-UUC	gene	translation-rna	−	31430	31503	73
trnT-GGU	gene	translation-rna	+	32078	32150	72
psbD	gene	photosystem-ii	+	33454	34516	1062
psbC	gene	photosystem-ii	+	34463	35885	1422
trnS-UGA	gene	translation-rna	−	36121	36213	92
psbZ	gene	photosystem-ii	+	36528	36717	189
trnG-GCC	gene	translation-rna	+	36994	37065	71
trnfM-CAU	gene	translation-rna	−	37210	37284	74
rps14	gene	ribosomal-protein	−	37438	37741	303
psaB	gene	photosystem-i	−	37869	40074	2205
psaA	gene	photosystem-i	−	40099	42352	2253
ycf3	gene	other	−	43051	44973	1922
trnS-GGA	gene	translation-rna	+	45855	45942	87
rps4	gene	ribosomal-protein	−	46217	46823	606
trnT-UGU	gene	translation-rna	−	47169	47242	73
trnL-UAA	gene	translation-rna	+	47919	48479	560
trnF-GAA	gene	translation-rna	+	48783	48856	73
ndhJ	gene	nad-dehydrogenase	−	49503	49980	477
ndhK	gene	nad-dehydrogenase	−	50088	50766	678
ndhC	gene	nad-dehydrogenase	−	50819	51182	363
trnV-UAC	gene	translation-rna	−	52166	52819	653
trnM-CAU	gene	translation-rna	+	53007	53080	73
atpE	gene	atp-synthase	−	53283	53685	402
atpB	gene	atp-synthase	−	53681	55178	1497
rbcL	gene	other	+	55929	57393	1464
accD	gene	other	+	58118	59597	1479
psaI	gene	photosystem-i	+	60303	60414	111
ycf4	gene	other	+	60839	61394	555
cemA	gene	other	+	62142	62742	600
petA	gene	cytochrome	+	62948	63911	963
psbJ	gene	photosystem-ii	−	64916	65039	123
psbL	gene	photosystem-ii	−	65172	65394	222
psbF	gene	photosystem-ii	−	65312	65432	120
psbE	gene	photosystem-ii	−	65446	65698	252
petL	gene	cytochrome	+	66576	66672	96
petG	gene	cytochrome	+	66847	66961	114
trnW-CCA	gene	translation-rna	−	67079	67153	74
trnP-UGG	gene	translation-rna	−	67322	67396	74
psaJ	gene	photosystem-i	+	67665	67800	135
rpl33	gene	ribosomal-protein	+	68284	68485	201
rps18	gene	ribosomal-protein	+	68659	68965	306
rpl20	gene	ribosomal-protein	−	69199	69586	387
rps12	gene	ribosomal-protein	−	70380	98445	28065
rps12	gene	ribosomal-protein	+	70380	138971	68591
clpP	gene	other	−	70635	72565	1930
psbB	gene	photosystem-ii	+	73023	74550	1527
psbT	gene	photosystem-ii	+	74740	74848	108
psbN	gene	photosystem-ii	−	74908	75040	132
psbH	gene	photosystem-ii	+	75143	75365	222
petB	gene	cytochrome	+	75489	76860	1371
petD	gene	cytochrome	+	77042	78248	1206
rpoA	gene	rna-polymerase	−	78602	79403	801
rps11	gene	ribosomal-protein	−	79474	79891	417
rpl36	gene	ribosomal-protein	−	79992	80106	114
infA	gene	other	−	80200	80434	234
rps8	gene	ribosomal-protein	−	80556	80967	411
rpl14	gene	ribosomal-protein	−	81118	81487	369
rpl16	gene	ribosomal-protein	−	81613	82847	1234
rps3	gene	ribosomal-protein	−	83001	83664	663
rpl22	gene	ribosomal-protein	−	83665	84121	456
rps19	gene	ribosomal-protein	−	84180	84459	279
rpl2	gene	ribosomal-protein	−	84513	85995	1482
rpl23	gene	ribosomal-protein	−	86013	86295	282
trnI-CAU	gene	translation-rna	−	86454	86528	74
ycf2	gene	other	+	86616	93426	6810
ycf15	gene	other	+	93516	93765	249
trnL-CAA	gene	translation-rna	−	94024	94105	81
ndhB	gene	nad-dehydrogenase	−	94647	96859	2212
rps7	gene	ribosomal-protein	−	97133	97601	468
trnV-GAC	gene	translation-rna	+	100016	100088	72
rrn16	gene	ribosomal-rna	+	100314	101805	1491
trnI-GAU	gene	translation-rna	+	102103	103123	1020
trnA-UGC	gene	translation-rna	+	103187	104078	891
rrn23	gene	ribosomal-rna	+	104247	107059	2812
rrn4.5	gene	ribosomal-rna	+	107157	107260	103
rrn5	gene	ribosomal-rna	+	107507	107628	121
trnR-ACG	gene	translation-rna	+	107862	107936	74
trnN-GUU	gene	translation-rna	−	108483	108555	72
ndhF	gene	nad-dehydrogenase	−	109611	111873	2262
rpl32	gene	ribosomal-protein	+	112200	112377	177
trnL-UAG	gene	translation-rna	+	112823	112903	80
ccsA	gene	other	+	113003	113978	975
ndhD	gene	nad-dehydrogenase	−	114234	115737	1503
psaC	gene	photosystem-i	−	115864	116110	246
ndhE	gene	nad-dehydrogenase	−	116365	116671	306
ndhG	gene	nad-dehydrogenase	−	116887	117418	531
ndhI	gene	nad-dehydrogenase	−	117784	118285	501
ndhA	gene	nad-dehydrogenase	−	118365	120487	2122
ndhH	gene	nad-dehydrogenase	−	120488	121700	1212
rps15	gene	ribosomal-protein	−	121749	122022	273
ycf1	gene	other	−	122215	127852	5637
trnN-GUU	gene	translation-rna	+	128070	128142	72
trnR-ACG	gene	translation-rna	−	128689	128763	74
rrn5	gene	ribosomal-rna	−	128997	129118	121
rrn4.5	gene	ribosomal-rna	−	129365	129468	103
rrn23	gene	ribosomal-rna	−	129566	132378	2812
trnA-UGC	gene	translation-rna	−	132547	133438	891
trnI-GAU	gene	translation-rna	−	133502	134522	1020
ycf68	gene	other	−	134073	134367	294
rrn16	gene	ribosomal-rna	−	134820	136311	1491
trnV-GAC	gene	translation-rna	−	136537	136609	72
rps7	gene	ribosomal-protein	+	139024	139492	468
ndhB	gene	nad-dehydrogenase	+	139766	141978	2212
trnL-CAA	gene	translation-rna	+	142520	142601	81
ycf15	gene	other	−	142860	143109	249
ycf2	gene	other	−	143199	150009	6810
trnI-CAU	gene	translation-rna	+	150097	150171	74
rpl23	gene	ribosomal-protein	+	150330	150612	282
rpl2	gene	ribosomal-protein	+	150630	152112	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058242.1DNA · accDPQ058242DNA · atpBPQ058242DNA · matKPQ058242DNA · ndhFPQ058242DNA · psbAPQ058242DNA · rbcLPQ058242DNA · rps12PQ058242DNA · ycf1PQ058242