Coordinate-aware organelle record

Scutellaria dependens chloroplast genome

Available MW420952.1 152,434 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	380	1439	1059
trnK-UUU	gene	translation-rna	−	1675	4255	2580
matK	gene	other	−	1966	3502	1536
rps16	gene	ribosomal-protein	−	5158	6327	1169
trnQ-UUC	gene	translation-rna	−	7455	7527	72
psbK	gene	photosystem-ii	+	7851	8037	186
psbI	gene	photosystem-ii	+	8428	8539	111
trnS-GCU	gene	translation-rna	−	8656	8744	88
trnG-CGA	gene	translation-rna	+	9432	10193	761
trnR-UCU	gene	translation-rna	+	10367	10439	72
atpA	gene	atp-synthase	−	10535	12059	1524
atpF	gene	atp-synthase	−	12132	13360	1228
atpH	gene	atp-synthase	−	13735	13981	246
atpI	gene	atp-synthase	−	14973	15717	744
rps2	gene	ribosomal-protein	−	16064	16775	711
rpoC2	gene	rna-polymerase	−	16991	21197	4206
rpoC1	gene	rna-polymerase	−	21351	24186	2835
rpoB	gene	rna-polymerase	−	24212	27425	3213
trnC-GCA	gene	translation-rna	+	28587	28658	71
petN	gene	cytochrome	+	29360	29450	90
psbM	gene	photosystem-ii	−	30463	30568	105
trnD-GUC	gene	translation-rna	−	31093	31167	74
trnY-GUA	gene	translation-rna	−	31280	31364	84
trnE-UUC	gene	translation-rna	−	31423	31496	73
trnT-GGU	gene	translation-rna	+	32078	32150	72
psbD	gene	photosystem-ii	+	33461	34523	1062
psbC	gene	photosystem-ii	+	34470	35892	1422
trnS-UCA	gene	translation-rna	−	36126	36219	93
psbZ	gene	photosystem-ii	+	36529	36718	189
trnG-GCC	gene	translation-rna	+	36989	37060	71
trnfM-CAU	gene	translation-rna	−	37203	37277	74
rps14	gene	ribosomal-protein	−	37426	37729	303
psaB	gene	photosystem-i	−	37856	40061	2205
psaA	gene	photosystem-i	−	40086	42339	2253
ycf3	gene	other	−	43012	44935	1923
trnS-GGA	gene	translation-rna	+	45733	45820	87
rps4	gene	ribosomal-protein	−	46105	46711	606
trnT-UGU	gene	translation-rna	−	47050	47123	73
trnL-UAA	gene	translation-rna	+	47809	48379	570
trnF-GAA	gene	translation-rna	+	48684	48757	73
ndhJ	gene	nad-dehydrogenase	−	49405	49882	477
ndhK	gene	nad-dehydrogenase	−	49989	50667	678
ndhC	gene	nad-dehydrogenase	−	50719	51082	363
trnV-UAC	gene	translation-rna	−	52078	52731	653
trnM-CAU	gene	translation-rna	+	52911	52984	73
atpE	gene	atp-synthase	−	53193	53595	402
atpB	gene	atp-synthase	−	53591	55079	1488
rbcL	gene	other	+	55850	57293	1443
accD	gene	other	+	58003	59470	1467
psaI	gene	photosystem-i	+	60201	60312	111
ycf4	gene	other	+	60745	61300	555
cemA	gene	other	+	61988	62648	660
petA	gene	cytochrome	+	62854	63817	963
pabJ	gene	other	−	64838	64961	123
psbL	gene	photosystem-ii	−	65094	65211	117
psbF	gene	photosystem-ii	−	65234	65354	120
psbE	gene	photosystem-ii	−	65368	65620	252
petL	gene	cytochrome	+	66523	66619	96
petG	gene	cytochrome	+	66793	66907	114
trnW-CCA	gene	translation-rna	−	67025	67099	74
trnP-UGG	gene	translation-rna	−	67268	67342	74
psbJ	gene	photosystem-ii	+	67613	67748	135
rpl33	gene	ribosomal-protein	+	68219	68420	201
rps18	gene	ribosomal-protein	+	68594	68900	306
rpl20	gene	ribosomal-protein	−	69138	69525	387
rps12	gene	ribosomal-protein	−	70314	98431	28117
rps12	gene	ribosomal-protein	+	70314	139201	68887
clpP	gene	other	−	70582	72515	1933
psbB	gene	photosystem-ii	+	72975	74502	1527
psbT	gene	photosystem-ii	+	74694	74796	102
psbN	gene	photosystem-ii	−	74869	75001	132
psbH	gene	photosystem-ii	+	75104	75326	222
petB	gene	cytochrome	+	75450	76811	1361
petD	gene	cytochrome	+	76999	78201	1202
rpoA	gene	rna-polymerase	−	78363	79377	1014
rps11	gene	ribosomal-protein	−	79448	79865	417
rpl36	gene	ribosomal-protein	−	79966	80080	114
infA	gene	other	−	80175	80409	234
rps8	gene	ribosomal-protein	−	80528	80939	411
rpl14	gene	ribosomal-protein	−	81097	81466	369
rpl16	gene	ribosomal-protein	−	81592	82836	1244
rps3	gene	ribosomal-protein	−	82990	83653	663
rpl22	gene	ribosomal-protein	−	83654	84110	456
rps19	gene	ribosomal-protein	−	84169	84448	279
rpl2	gene	ribosomal-protein	−	84502	85985	1483
rpl23	gene	ribosomal-protein	−	86003	86285	282
trnI-CAU	gene	translation-rna	−	86444	86518	74
ycf2	gene	other	+	86606	93416	6810
ycf15	gene	other	+	93557	93755	198
trnL-CAA	gene	translation-rna	−	94010	94091	81
ndhB	gene	nad-dehydrogenase	−	94633	96845	2212
rps7	gene	ribosomal-protein	−	97119	97587	468
trnV-GAC	gene	translation-rna	+	100008	100080	72
rrn16	gene	ribosomal-rna	+	100306	101794	1488
trnI-GAU	gene	translation-rna	+	102092	103112	1020
trnA-UGC	gene	translation-rna	+	103177	104066	889
rrn23	gene	ribosomal-rna	+	104235	107049	2814
rrn4.5	gene	ribosomal-rna	+	107147	107250	103
rrn5	gene	ribosomal-rna	+	107496	107617	121
trnR-ACG	gene	translation-rna	+	107851	107925	74
trnN-GUU	gene	translation-rna	+	108471	108543	72
ndhF	gene	nad-dehydrogenase	−	109619	111860	2241
rpl32	gene	ribosomal-protein	+	112370	112538	168
trnL-UAG	gene	translation-rna	+	112985	113065	80
ccsA	gene	other	+	113162	114137	975
ndhD	gene	nad-dehydrogenase	−	114369	115899	1530
psaC	gene	photosystem-i	−	115990	116236	246
ndhE	gene	nad-dehydrogenase	−	116492	116798	306
ndhG	gene	nad-dehydrogenase	−	117023	117554	531
ndhI	gene	nad-dehydrogenase	−	117919	118420	501
ndhA	gene	nad-dehydrogenase	−	118500	120600	2100
ndhH	gene	nad-dehydrogenase	−	120601	121783	1182
rps15	gene	ribosomal-protein	−	121885	122158	273
ycf1	gene	other	−	122425	127969	5544
trnN-GUU	gene	translation-rna	−	128298	128370	72
trnR-ACG	gene	translation-rna	−	128916	128990	74
rrn5	gene	ribosomal-rna	−	129224	129345	121
rrn4.5	gene	ribosomal-rna	−	129591	129694	103
rrn23	gene	ribosomal-rna	−	129792	132606	2814
trnA-UGC	gene	translation-rna	−	132775	133664	889
trnI-GAU	gene	translation-rna	−	133729	134749	1020
rrn16	gene	ribosomal-rna	−	135047	136535	1488
trnV-GAC	gene	translation-rna	−	136761	136833	72
rps7	gene	ribosomal-protein	+	139254	139722	468
ndhB	gene	nad-dehydrogenase	+	139996	142208	2212
trnL-CAA	gene	translation-rna	+	142750	142831	81
ycf15	gene	other	−	143086	143284	198
ycf2	gene	other	−	143425	150235	6810
trnI-CAU	gene	translation-rna	+	150323	150397	74
rpl23	gene	ribosomal-protein	+	150556	150838	282
rpl2	gene	ribosomal-protein	+	150856	152339	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420952.1DNA · accDMW420952DNA · atpBMW420952DNA · matKMW420952DNA · ndhFMW420952DNA · psbAMW420952DNA · rbcLMW420952DNA · rps12MW420952DNA · ycf1MW420952