Coordinate-aware organelle record

Scutellaria diffusa chloroplast genome

Available PQ059212.1 152,407 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1678	4261	2583
matK	gene	other	−	1968	3504	1536
rps16	gene	ribosomal-protein	−	5153	6316	1163
trnQ-UUG	gene	translation-rna	−	7430	7502	72
psbK	gene	photosystem-ii	+	7827	8013	186
psbI	gene	photosystem-ii	+	8406	8517	111
trnS-GCU	gene	translation-rna	−	8636	8724	88
trnG-UCC	gene	translation-rna	+	9404	10162	758
trnR-UCU	gene	translation-rna	+	10336	10408	72
atpA	gene	atp-synthase	−	10504	12028	1524
atpF	gene	atp-synthase	−	12100	13330	1230
atpH	gene	atp-synthase	−	13692	13938	246
atpI	gene	atp-synthase	−	14918	15662	744
rps2	gene	ribosomal-protein	−	16001	16712	711
rpoC2	gene	rna-polymerase	−	16926	21132	4206
rpoC1	gene	rna-polymerase	−	21285	24127	2842
rpoB	gene	rna-polymerase	−	24153	27366	3213
trnC-GCA	gene	translation-rna	+	28526	28597	71
petN	gene	cytochrome	+	29326	29416	90
psbM	gene	photosystem-ii	−	30401	30506	105
trnD-GUC	gene	translation-rna	−	31039	31113	74
trnY-GUA	gene	translation-rna	−	31226	31310	84
trnE-UUC	gene	translation-rna	−	31369	31442	73
trnT-GGU	gene	translation-rna	+	32010	32082	72
psbD	gene	photosystem-ii	+	33391	34453	1062
psbC	gene	photosystem-ii	+	34400	35822	1422
trnS-UGA	gene	translation-rna	−	36057	36149	92
psbZ	gene	photosystem-ii	+	36456	36645	189
trnG-GCC	gene	translation-rna	+	36917	36988	71
trnfM-CAU	gene	translation-rna	−	37130	37204	74
rps14	gene	ribosomal-protein	−	37358	37661	303
psaB	gene	photosystem-i	−	37788	39993	2205
psaA	gene	photosystem-i	−	40018	42271	2253
ycf3	gene	other	−	42966	44897	1931
trnS-GGA	gene	translation-rna	+	45780	45867	87
rps4	gene	ribosomal-protein	−	46148	46754	606
trnT-UGU	gene	translation-rna	−	47085	47158	73
trnL-UAA	gene	translation-rna	+	47842	48407	565
trnF-GAA	gene	translation-rna	+	48718	48791	73
ndhJ	gene	nad-dehydrogenase	−	49432	49909	477
ndhK	gene	nad-dehydrogenase	−	50017	50695	678
ndhC	gene	nad-dehydrogenase	−	50747	51110	363
trnV-UAC	gene	translation-rna	−	52096	52749	653
trnM-CAU	gene	translation-rna	+	52937	53010	73
atpE	gene	atp-synthase	−	53218	53620	402
atpB	gene	atp-synthase	−	53616	55113	1497
rbcL	gene	other	+	55864	57328	1464
accD	gene	other	+	58019	59498	1479
psaI	gene	photosystem-i	+	60208	60319	111
ycf4	gene	other	+	60754	61309	555
cemA	gene	other	+	62051	62651	600
petA	gene	cytochrome	+	62857	63820	963
psbJ	gene	photosystem-ii	−	64843	64966	123
psbL	gene	photosystem-ii	−	65099	65321	222
psbF	gene	photosystem-ii	−	65239	65359	120
psbE	gene	photosystem-ii	−	65373	65625	252
petL	gene	cytochrome	+	66489	66585	96
petG	gene	cytochrome	+	66760	66874	114
trnW-CCA	gene	translation-rna	−	66992	67066	74
trnP-UGG	gene	translation-rna	−	67235	67309	74
psaJ	gene	photosystem-i	+	67580	67715	135
rpl33	gene	ribosomal-protein	+	68308	68509	201
rps18	gene	ribosomal-protein	+	68683	68989	306
rpl20	gene	ribosomal-protein	−	69226	69613	387
rps12	gene	ribosomal-protein	−	70389	98480	28091
rps12	gene	ribosomal-protein	+	70389	139197	68808
clpP	gene	other	−	70655	72587	1932
psbB	gene	photosystem-ii	+	73053	74580	1527
psbT	gene	photosystem-ii	+	74773	74875	102
psbN	gene	photosystem-ii	−	74948	75080	132
psbH	gene	photosystem-ii	+	75183	75405	222
petB	gene	cytochrome	+	75530	76898	1368
petD	gene	cytochrome	+	77086	78278	1192
rpoA	gene	rna-polymerase	−	78440	79448	1008
rps11	gene	ribosomal-protein	−	79519	79936	417
rpl36	gene	ribosomal-protein	−	80037	80151	114
infA	gene	other	−	80245	80479	234
rps8	gene	ribosomal-protein	−	80602	81013	411
rpl14	gene	ribosomal-protein	−	81169	81538	369
rpl16	gene	ribosomal-protein	−	81664	82901	1237
rps3	gene	ribosomal-protein	−	83067	83730	663
rpl22	gene	ribosomal-protein	−	83731	84187	456
rps19	gene	ribosomal-protein	−	84246	84525	279
rpl2	gene	ribosomal-protein	−	84578	86060	1482
rpl23	gene	ribosomal-protein	−	86078	86360	282
trnI-CAU	gene	translation-rna	−	86519	86593	74
ycf2	gene	other	+	86681	93461	6780
ycf15	gene	other	+	93602	93800	198
trnL-CAA	gene	translation-rna	−	94059	94140	81
ndhB	gene	nad-dehydrogenase	−	94682	96894	2212
rps7	gene	ribosomal-protein	−	97168	97636	468
trnV-GAC	gene	translation-rna	+	100051	100123	72
rrn16	gene	ribosomal-rna	+	100349	101840	1491
trnI-GAU	gene	translation-rna	+	102138	103159	1021
trnA-UGC	gene	translation-rna	+	103223	104111	888
rrn23	gene	ribosomal-rna	+	104280	107092	2812
rrn4.5	gene	ribosomal-rna	+	107190	107293	103
rrn5	gene	ribosomal-rna	+	107540	107661	121
trnR-ACG	gene	translation-rna	+	107895	107969	74
trnN-GUU	gene	translation-rna	−	108520	108592	72
ndhF	gene	nad-dehydrogenase	−	109668	111909	2241
rpl32	gene	ribosomal-protein	+	112422	112599	177
trnL-UAG	gene	translation-rna	+	113045	113125	80
ccsA	gene	other	+	113227	114202	975
ndhD	gene	nad-dehydrogenase	−	114435	115938	1503
psaC	gene	photosystem-i	−	116063	116309	246
ndhE	gene	nad-dehydrogenase	−	116564	116870	306
ndhG	gene	nad-dehydrogenase	−	117091	117622	531
ndhI	gene	nad-dehydrogenase	−	117987	118488	501
ndhA	gene	nad-dehydrogenase	−	118575	120684	2109
ndhH	gene	nad-dehydrogenase	−	120685	121867	1182
rps15	gene	ribosomal-protein	−	121963	122236	273
ycf1	gene	other	−	122433	128076	5643
trnN-GUU	gene	translation-rna	+	128294	128366	72
trnR-ACG	gene	translation-rna	−	128917	128991	74
rrn5	gene	ribosomal-rna	−	129225	129346	121
rrn4.5	gene	ribosomal-rna	−	129593	129696	103
rrn23	gene	ribosomal-rna	−	129794	132606	2812
trnA-UGC	gene	translation-rna	−	132775	133663	888
trnI-GAU	gene	translation-rna	−	133727	134748	1021
ycf68	gene	other	−	134299	134593	294
rrn16	gene	ribosomal-rna	−	135046	136537	1491
trnV-GAC	gene	translation-rna	−	136763	136835	72
rps7	gene	ribosomal-protein	+	139250	139718	468
ndhB	gene	nad-dehydrogenase	+	139992	142204	2212
trnL-CAA	gene	translation-rna	+	142746	142827	81
ycf15	gene	other	−	143086	143284	198
ycf2	gene	other	−	143425	150205	6780
trnI-CAU	gene	translation-rna	+	150293	150367	74
rpl23	gene	ribosomal-protein	+	150526	150808	282
rpl2	gene	ribosomal-protein	+	150826	152308	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059212.1DNA · accDPQ059212DNA · atpBPQ059212DNA · matKPQ059212DNA · ndhFPQ059212DNA · psbAPQ059212DNA · rbcLPQ059212DNA · rps12PQ059212DNA · ycf1PQ059212