Coordinate-aware organelle record

Scutellaria discolor chloroplast genome

Available MW420951.1 151,762 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	368	1427	1059
trnK-UUU	gene	translation-rna	−	1672	4253	2581
matK	gene	other	−	1963	3499	1536
rps16	gene	ribosomal-protein	−	5130	6294	1164
trnQ-UUC	gene	translation-rna	−	7313	7385	72
psbK	gene	photosystem-ii	+	7709	7895	186
psbI	gene	photosystem-ii	+	8287	8398	111
trnS-GCU	gene	translation-rna	−	8516	8604	88
trnG-CGA	gene	translation-rna	+	9285	10046	761
trnR-UCU	gene	translation-rna	+	10216	10288	72
atpA	gene	atp-synthase	−	10384	11908	1524
atpF	gene	atp-synthase	−	11990	13218	1228
atpH	gene	atp-synthase	−	13573	13819	246
atpI	gene	atp-synthase	−	14814	15558	744
rps2	gene	ribosomal-protein	−	15905	16616	711
rpoC2	gene	rna-polymerase	−	16832	21038	4206
rpoC1	gene	rna-polymerase	−	21201	24024	2823
rpoB	gene	rna-polymerase	−	24050	27263	3213
trnC-GCA	gene	translation-rna	+	28432	28503	71
petN	gene	cytochrome	+	29214	29304	90
psbM	gene	photosystem-ii	−	30278	30383	105
trnD-GUC	gene	translation-rna	−	30909	30983	74
trnY-GUA	gene	translation-rna	−	31096	31180	84
trnE-UUC	gene	translation-rna	−	31239	31312	73
trnT-GGU	gene	translation-rna	+	31887	31959	72
psbD	gene	photosystem-ii	+	33260	34322	1062
psbC	gene	photosystem-ii	+	34269	35691	1422
trnS-UCA	gene	translation-rna	−	35925	36018	93
psbZ	gene	photosystem-ii	+	36337	36526	189
trnG-GCC	gene	translation-rna	+	36797	36868	71
trnfM-CAU	gene	translation-rna	−	37020	37094	74
rps14	gene	ribosomal-protein	−	37243	37546	303
psaB	gene	photosystem-i	−	37673	39878	2205
psaA	gene	photosystem-i	−	39903	42156	2253
ycf3	gene	other	−	42825	44748	1923
trnS-GGA	gene	translation-rna	+	45623	45710	87
rps4	gene	ribosomal-protein	−	45995	46601	606
trnT-UGU	gene	translation-rna	−	46938	47011	73
trnL-UAA	gene	translation-rna	+	47695	48257	562
trnF-GAA	gene	translation-rna	+	48562	48635	73
ndhJ	gene	nad-dehydrogenase	−	49283	49760	477
ndhK	gene	nad-dehydrogenase	−	49867	50545	678
ndhC	gene	nad-dehydrogenase	−	50598	50961	363
trnV-UAC	gene	translation-rna	−	51816	52469	653
trnM-CAU	gene	translation-rna	+	52640	52713	73
atpE	gene	atp-synthase	−	52928	53330	402
atpB	gene	atp-synthase	−	53326	54814	1488
rbcL	gene	other	+	55603	57046	1443
accD	gene	other	+	57779	59246	1467
psaI	gene	photosystem-i	+	59803	59914	111
ycf4	gene	other	+	60347	60902	555
cemA	gene	other	+	61579	62239	660
petA	gene	cytochrome	+	62445	63408	963
pabJ	gene	other	−	64441	64564	123
psbL	gene	photosystem-ii	−	64697	64814	117
psbF	gene	photosystem-ii	−	64837	64957	120
psbE	gene	photosystem-ii	−	64971	65223	252
petL	gene	cytochrome	+	66131	66227	96
petG	gene	cytochrome	+	66402	66516	114
trnW-CCA	gene	translation-rna	−	66634	66708	74
trnP-UGG	gene	translation-rna	−	66868	66942	74
psbJ	gene	photosystem-ii	+	67213	67348	135
rpl33	gene	ribosomal-protein	+	67821	68022	201
rps18	gene	ribosomal-protein	+	68196	68502	306
rpl20	gene	ribosomal-protein	−	68741	69128	387
rps12	gene	ribosomal-protein	−	69915	97995	28080
rps12	gene	ribosomal-protein	+	69915	138529	68614
clpP	gene	other	−	70183	72117	1934
psbB	gene	photosystem-ii	+	72561	74088	1527
psbT	gene	photosystem-ii	+	74279	74381	102
psbN	gene	photosystem-ii	−	74454	74586	132
psbH	gene	photosystem-ii	+	74689	74911	222
petB	gene	cytochrome	+	75035	76403	1368
petD	gene	cytochrome	+	76591	77782	1191
rpoA	gene	rna-polymerase	−	77944	78958	1014
rps11	gene	ribosomal-protein	−	79029	79446	417
rpl36	gene	ribosomal-protein	−	79547	79661	114
infA	gene	other	−	79756	79990	234
rps8	gene	ribosomal-protein	−	80109	80520	411
rpl14	gene	ribosomal-protein	−	80687	81056	369
rpl16	gene	ribosomal-protein	−	81182	82409	1227
rps3	gene	ribosomal-protein	−	82563	83226	663
rpl22	gene	ribosomal-protein	−	83227	83674	447
rps19	gene	ribosomal-protein	−	83733	84012	279
rpl2	gene	ribosomal-protein	−	84066	85549	1483
rpl23	gene	ribosomal-protein	−	85567	85849	282
trnI-CAU	gene	translation-rna	−	86008	86082	74
ycf2	gene	other	+	86170	92980	6810
ycf15	gene	other	+	93121	93319	198
trnL-CAA	gene	translation-rna	−	93574	93655	81
ndhB	gene	nad-dehydrogenase	−	94197	96409	2212
rps7	gene	ribosomal-protein	−	96683	97151	468
trnV-GAC	gene	translation-rna	+	99572	99644	72
rrn16	gene	ribosomal-rna	+	99871	101362	1491
trnI-GAU	gene	translation-rna	+	101660	102680	1020
trnA-UGC	gene	translation-rna	+	102745	103627	882
rrn23	gene	ribosomal-rna	+	103796	106609	2813
rrn4.5	gene	ribosomal-rna	+	106707	106810	103
rrn5	gene	ribosomal-rna	+	107057	107178	121
trnR-ACG	gene	translation-rna	+	107412	107486	74
trnN-GUU	gene	translation-rna	+	108032	108104	72
ndhF	gene	nad-dehydrogenase	−	109180	111421	2241
rpl32	gene	ribosomal-protein	+	111941	112118	177
trnL-UAG	gene	translation-rna	+	112562	112642	80
ccsA	gene	other	+	112747	113722	975
ndhD	gene	nad-dehydrogenase	−	113954	115484	1530
psaC	gene	photosystem-i	−	115575	115821	246
ndhE	gene	nad-dehydrogenase	−	116077	116383	306
ndhG	gene	nad-dehydrogenase	−	116603	117134	531
ndhI	gene	nad-dehydrogenase	−	117498	117999	501
ndhA	gene	nad-dehydrogenase	−	118079	120175	2096
ndhH	gene	nad-dehydrogenase	−	120176	121358	1182
rps15	gene	ribosomal-protein	−	121460	121733	273
ycf1	gene	other	−	121999	127300	5301
trnN-GUU	gene	translation-rna	+	127629	127701	72
trnR-ACG	gene	translation-rna	−	128247	128321	74
rrn5	gene	ribosomal-rna	−	128555	128676	121
rrn4.5	gene	ribosomal-rna	−	128923	129026	103
rrn23	gene	ribosomal-rna	−	129124	131937	2813
trnA-UGC	gene	translation-rna	−	132106	132988	882
trnI-GAU	gene	translation-rna	−	133053	134073	1020
rrn16	gene	ribosomal-rna	−	134371	135862	1491
trnV-GAC	gene	translation-rna	−	136089	136161	72
rps7	gene	ribosomal-protein	+	138582	139050	468
ndhB	gene	nad-dehydrogenase	+	139324	141536	2212
trnL-CAA	gene	translation-rna	+	142078	142159	81
ycf15	gene	other	−	142414	142612	198
ycf2	gene	other	−	142753	149563	6810
trnI-CAU	gene	translation-rna	+	149651	149725	74
rpl23	gene	ribosomal-protein	+	149884	150166	282
rpl2	gene	ribosomal-protein	+	150184	151667	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420951.1DNA · accDMW420951DNA · atpBMW420951DNA · matKMW420951DNA · ndhFMW420951DNA · psbAMW420951DNA · rbcLMW420951DNA · rps12MW420951DNA · ycf1MW420951