Coordinate-aware organelle record

Scutellaria dumetorum chloroplast genome

Available PQ059399.1 154,253 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	74	74
psbA	gene	photosystem-ii	−	266	1325	1059
trnK-UUU	gene	translation-rna	−	1557	4152	2595
matK	gene	other	−	1857	3396	1539
rps16	gene	ribosomal-protein	−	5065	6229	1164
trnQ-UUG	gene	translation-rna	−	7326	7398	72
psbK	gene	photosystem-ii	+	7723	7909	186
psbI	gene	photosystem-ii	+	8300	8411	111
trnS-GCU	gene	translation-rna	−	8519	8607	88
trnG-UCC	gene	translation-rna	+	9291	10050	759
trnR-UCU	gene	translation-rna	+	10224	10296	72
atpA	gene	atp-synthase	−	10392	11916	1524
atpF	gene	atp-synthase	−	11998	13227	1229
atpH	gene	atp-synthase	−	13583	13829	246
atpI	gene	atp-synthase	−	14821	15565	744
rps2	gene	ribosomal-protein	−	15912	16623	711
rpoC2	gene	rna-polymerase	−	16846	21052	4206
rpoC1	gene	rna-polymerase	−	21206	24052	2846
rpoB	gene	rna-polymerase	−	24078	27291	3213
trnC-GCA	gene	translation-rna	+	28440	28511	71
petN	gene	cytochrome	+	29208	29298	90
psbM	gene	photosystem-ii	−	30328	30433	105
trnD-GUC	gene	translation-rna	−	30959	31033	74
trnY-GUA	gene	translation-rna	−	31146	31230	84
trnE-UUC	gene	translation-rna	−	31289	31362	73
trnT-GGU	gene	translation-rna	+	31937	32009	72
psbD	gene	photosystem-ii	+	33375	34437	1062
psbD	gene	photosystem-ii	+	35843	36905	1062
psbC	gene	photosystem-ii	+	36852	38274	1422
trnS-UGA	gene	translation-rna	−	38510	38602	92
psbZ	gene	photosystem-ii	+	38928	39117	189
trnG-GCC	gene	translation-rna	+	39379	39450	71
trnfM-CAU	gene	translation-rna	−	39598	39672	74
rps14	gene	ribosomal-protein	−	39821	40124	303
psaB	gene	photosystem-i	−	40251	42456	2205
psaA	gene	photosystem-i	−	42481	44734	2253
ycf3	gene	other	−	45427	47347	1920
trnS-GGA	gene	translation-rna	+	48239	48326	87
rps4	gene	ribosomal-protein	−	48609	49215	606
trnT-UGU	gene	translation-rna	−	49567	49640	73
trnL-UAA	gene	translation-rna	+	50312	50870	558
trnF-GAA	gene	translation-rna	+	51175	51248	73
ndhJ	gene	nad-dehydrogenase	−	51906	52383	477
ndhK	gene	nad-dehydrogenase	−	52490	53168	678
ndhC	gene	nad-dehydrogenase	−	53220	53583	363
trnV-UAC	gene	translation-rna	−	54028	54682	654
trnM-CAU	gene	translation-rna	+	54862	54935	73
atpE	gene	atp-synthase	−	55143	55545	402
atpB	gene	atp-synthase	−	55541	57038	1497
rbcL	gene	other	+	57782	59246	1464
accD	gene	other	+	59958	61437	1479
psaI	gene	photosystem-i	+	62148	62259	111
ycf4	gene	other	+	62684	63239	555
cemA	gene	other	+	63980	64580	600
petA	gene	cytochrome	+	64785	65748	963
psbJ	gene	photosystem-ii	−	66676	66799	123
psbL	gene	photosystem-ii	−	66932	67049	117
psbF	gene	photosystem-ii	−	67072	67192	120
psbE	gene	photosystem-ii	−	67206	67458	252
petL	gene	cytochrome	+	68366	68462	96
petG	gene	cytochrome	+	68636	68750	114
trnW-CCA	gene	translation-rna	−	68868	68942	74
trnP-UGG	gene	translation-rna	−	69101	69175	74
psaJ	gene	photosystem-i	+	69446	69581	135
rpl33	gene	ribosomal-protein	+	70045	70246	201
rps18	gene	ribosomal-protein	+	70420	70747	327
rpl20	gene	ribosomal-protein	−	70982	71369	387
rps12	gene	ribosomal-protein	−	72167	100268	28101
rps12	gene	ribosomal-protein	+	72167	141052	68885
clpP	gene	other	−	72422	74358	1936
psbB	gene	photosystem-ii	+	74829	76356	1527
psbT	gene	photosystem-ii	+	76547	76655	108
psbN	gene	photosystem-ii	−	76715	76847	132
psbH	gene	photosystem-ii	+	76950	77172	222
petB	gene	cytochrome	+	77293	78664	1371
petD	gene	cytochrome	+	78852	80057	1205
rpoA	gene	rna-polymerase	−	80219	81233	1014
rps11	gene	ribosomal-protein	−	81304	81721	417
rpl36	gene	ribosomal-protein	−	81823	81937	114
infA	gene	other	−	82032	82266	234
rps8	gene	ribosomal-protein	−	82385	82796	411
rpl14	gene	ribosomal-protein	−	82966	83335	369
rpl16	gene	ribosomal-protein	−	83464	84713	1249
rps3	gene	ribosomal-protein	−	84860	85523	663
rpl22	gene	ribosomal-protein	−	85524	85980	456
rps19	gene	ribosomal-protein	−	86039	86318	279
rpl2	gene	ribosomal-protein	−	86373	87856	1483
rpl23	gene	ribosomal-protein	−	87874	88156	282
trnI-CAU	gene	translation-rna	−	88315	88389	74
ycf2	gene	other	+	88477	95248	6771
ycf15	gene	other	+	95389	95587	198
trnL-CAA	gene	translation-rna	−	95847	95928	81
ndhB	gene	nad-dehydrogenase	−	96470	98628	2158
rps7	gene	ribosomal-protein	−	98956	99424	468
trnV-GAC	gene	translation-rna	+	101845	101917	72
rrn16	gene	ribosomal-rna	+	102144	103635	1491
trnI-GAU	gene	translation-rna	+	103933	104953	1020
trnA-UGC	gene	translation-rna	+	105017	105905	888
rrn23	gene	ribosomal-rna	+	106074	108887	2813
rrn4.5	gene	ribosomal-rna	+	108985	109088	103
rrn5	gene	ribosomal-rna	+	109335	109456	121
trnR-ACG	gene	translation-rna	+	109683	109757	74
trnN-GUU	gene	translation-rna	−	110313	110385	72
ndhF	gene	nad-dehydrogenase	−	111467	113720	2253
rpl32	gene	ribosomal-protein	+	114239	114416	177
trnL-UAG	gene	translation-rna	+	114850	114930	80
ccsA	gene	other	+	115025	116000	975
ndhD	gene	nad-dehydrogenase	−	116234	117764	1530
psaC	gene	photosystem-i	−	117862	118108	246
ndhE	gene	nad-dehydrogenase	−	118371	118677	306
ndhG	gene	nad-dehydrogenase	−	118898	119429	531
ndhI	gene	nad-dehydrogenase	−	119792	120293	501
ndhA	gene	nad-dehydrogenase	−	120373	122471	2098
ndhH	gene	nad-dehydrogenase	−	122472	123654	1182
rps15	gene	ribosomal-protein	−	123750	124023	273
ycf1	gene	other	−	124292	129926	5634
trnN-GUU	gene	translation-rna	+	130144	130216	72
trnR-ACG	gene	translation-rna	−	130772	130846	74
rrn5	gene	ribosomal-rna	−	131073	131194	121
rrn4.5	gene	ribosomal-rna	−	131441	131544	103
rrn23	gene	ribosomal-rna	−	131642	134455	2813
trnA-UGC	gene	translation-rna	−	134624	135512	888
trnI-GAU	gene	translation-rna	−	135576	136596	1020
ycf68	gene	other	−	136147	136441	294
rrn16	gene	ribosomal-rna	−	136894	138385	1491
trnV-GAC	gene	translation-rna	−	138612	138684	72
rps7	gene	ribosomal-protein	+	141105	141573	468
ndhB	gene	nad-dehydrogenase	+	141901	144059	2158
trnL-CAA	gene	translation-rna	+	144601	144682	81
ycf15	gene	other	−	144942	145140	198
ycf2	gene	other	−	145281	152052	6771
trnI-CAU	gene	translation-rna	+	152140	152214	74
rpl23	gene	ribosomal-protein	+	152373	152655	282
rpl2	gene	ribosomal-protein	+	152673	154156	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059399.1DNA · accDPQ059399DNA · atpBPQ059399DNA · matKPQ059399DNA · ndhFPQ059399DNA · psbAPQ059399DNA · rbcLPQ059399DNA · rps12PQ059399DNA · ycf1PQ059399