Coordinate-aware organelle record

Scutellaria elliptica var. hirsuta chloroplast genome

Available PQ059304.1 151,591 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	378	1437	1059
trnK-UUU	gene	translation-rna	−	1679	4274	2595
matK	gene	other	−	1980	3516	1536
rps16	gene	ribosomal-protein	−	5175	6335	1160
trnQ-UUG	gene	translation-rna	−	7427	7499	72
psbK	gene	photosystem-ii	+	7832	8018	186
psbI	gene	photosystem-ii	+	8400	8511	111
trnS-GCU	gene	translation-rna	−	8620	8708	88
trnG-UCC	gene	translation-rna	+	9381	10143	762
trnR-UCU	gene	translation-rna	+	10317	10389	72
atpA	gene	atp-synthase	−	10491	12015	1524
atpF	gene	atp-synthase	−	12087	13321	1234
atpH	gene	atp-synthase	−	13683	13929	246
atpI	gene	atp-synthase	−	14918	15662	744
rps2	gene	ribosomal-protein	−	16001	16712	711
rpoC2	gene	rna-polymerase	−	16934	21128	4194
rpoC1	gene	rna-polymerase	−	21282	24082	2800
rpoB	gene	rna-polymerase	−	24108	27321	3213
trnC-GCA	gene	translation-rna	+	28481	28552	71
petN	gene	cytochrome	+	29263	29353	90
psbM	gene	photosystem-ii	−	30353	30458	105
trnD-GUC	gene	translation-rna	−	30987	31061	74
trnY-GUA	gene	translation-rna	−	31180	31264	84
trnE-UUC	gene	translation-rna	−	31323	31396	73
trnT-GGU	gene	translation-rna	+	31979	32051	72
psbD	gene	photosystem-ii	+	33343	34405	1062
psbC	gene	photosystem-ii	+	34352	35774	1422
trnS-UGA	gene	translation-rna	−	36013	36105	92
psbZ	gene	photosystem-ii	+	36424	36613	189
trnG-GCC	gene	translation-rna	+	36888	36959	71
trnfM-CAU	gene	translation-rna	−	37112	37186	74
rps14	gene	ribosomal-protein	−	37335	37638	303
psaB	gene	photosystem-i	−	37765	39970	2205
psaA	gene	photosystem-i	−	39994	42247	2253
ycf3	gene	other	−	42942	44854	1912
trnS-GGA	gene	translation-rna	+	45194	45281	87
rps4	gene	ribosomal-protein	−	45564	46170	606
trnT-UGU	gene	translation-rna	−	46508	46581	73
trnL-UAA	gene	translation-rna	+	47214	47779	565
trnF-GAA	gene	translation-rna	+	48084	48157	73
ndhJ	gene	nad-dehydrogenase	−	48808	49285	477
ndhK	gene	nad-dehydrogenase	−	49392	50070	678
ndhC	gene	nad-dehydrogenase	−	50122	50485	363
trnV-UAC	gene	translation-rna	−	51472	52125	653
trnM-CAU	gene	translation-rna	+	52305	52378	73
atpE	gene	atp-synthase	−	52588	52990	402
atpB	gene	atp-synthase	−	52986	54483	1497
rbcL	gene	other	+	55228	56692	1464
accD	gene	other	+	57403	58882	1479
psaI	gene	photosystem-i	+	59576	59687	111
ycf4	gene	other	+	60113	60668	555
cemA	gene	other	+	61408	62008	600
petA	gene	cytochrome	+	62214	63177	963
psbJ	gene	photosystem-ii	−	64219	64342	123
psbL	gene	photosystem-ii	−	64476	64698	222
psbF	gene	photosystem-ii	−	64616	64736	120
psbE	gene	photosystem-ii	−	64750	65002	252
petL	gene	cytochrome	+	65909	66005	96
petG	gene	cytochrome	+	66180	66294	114
trnW-CCA	gene	translation-rna	−	66412	66486	74
trnP-UGG	gene	translation-rna	−	66649	66723	74
psaJ	gene	photosystem-i	+	66991	67126	135
rpl33	gene	ribosomal-protein	+	67597	67798	201
rps18	gene	ribosomal-protein	+	67971	68277	306
rpl20	gene	ribosomal-protein	−	68512	68899	387
rps12	gene	ribosomal-protein	−	69683	97775	28092
rps12	gene	ribosomal-protein	+	69683	138388	68705
clpP	gene	other	−	69950	71880	1930
psbB	gene	photosystem-ii	+	72331	73858	1527
psbT	gene	photosystem-ii	+	74049	74151	102
psbN	gene	photosystem-ii	−	74224	74356	132
psbH	gene	photosystem-ii	+	74459	74681	222
petB	gene	cytochrome	+	74805	76176	1371
petD	gene	cytochrome	+	76364	77570	1206
rpoA	gene	rna-polymerase	−	77732	78746	1014
rps11	gene	ribosomal-protein	−	78817	79234	417
rpl36	gene	ribosomal-protein	−	79335	79449	114
infA	gene	other	−	79544	79778	234
rps8	gene	ribosomal-protein	−	79898	80309	411
rpl14	gene	ribosomal-protein	−	80467	80836	369
rpl16	gene	ribosomal-protein	−	80962	82206	1244
rps3	gene	ribosomal-protein	−	82360	83023	663
rpl22	gene	ribosomal-protein	−	83024	83480	456
rps19	gene	ribosomal-protein	−	83544	83823	279
rpl2	gene	ribosomal-protein	−	83879	85362	1483
rpl23	gene	ribosomal-protein	−	85380	85662	282
trnI-CAU	gene	translation-rna	−	85821	85895	74
ycf2	gene	other	+	85983	92772	6789
ycf15	gene	other	+	92854	93103	249
trnL-CAA	gene	translation-rna	−	93363	93444	81
ndhB	gene	nad-dehydrogenase	−	93986	96135	2149
rps7	gene	ribosomal-protein	−	96463	96931	468
trnV-GAC	gene	translation-rna	+	99344	99416	72
rrn16	gene	ribosomal-rna	+	99643	101134	1491
trnI-GAU	gene	translation-rna	+	101423	102444	1021
trnA-UGC	gene	translation-rna	+	102508	103396	888
rrn23	gene	ribosomal-rna	+	103558	106371	2813
rrn4.5	gene	ribosomal-rna	+	106469	106572	103
rrn5	gene	ribosomal-rna	+	106819	106940	121
trnR-ACG	gene	translation-rna	+	107164	107238	74
trnN-GUU	gene	translation-rna	−	107785	107857	72
ndhF	gene	nad-dehydrogenase	−	108933	111174	2241
rpl32	gene	ribosomal-protein	+	111695	111872	177
trnL-UAG	gene	translation-rna	+	112307	112387	80
ccsA	gene	other	+	112480	113455	975
ndhD	gene	nad-dehydrogenase	−	113689	115192	1503
psaC	gene	photosystem-i	−	115318	115564	246
ndhE	gene	nad-dehydrogenase	−	115815	116121	306
ndhG	gene	nad-dehydrogenase	−	116351	116882	531
ndhI	gene	nad-dehydrogenase	−	117246	117747	501
ndhA	gene	nad-dehydrogenase	−	117827	119925	2098
ndhH	gene	nad-dehydrogenase	−	119926	121108	1182
rps15	gene	ribosomal-protein	−	121204	121477	273
ycf1	gene	other	−	121750	127297	5547
trnN-GUU	gene	translation-rna	+	127515	127587	72
trnR-ACG	gene	translation-rna	−	128134	128208	74
rrn5	gene	ribosomal-rna	−	128432	128553	121
rrn4.5	gene	ribosomal-rna	−	128800	128903	103
rrn23	gene	ribosomal-rna	−	129001	131814	2813
trnA-UGC	gene	translation-rna	−	131976	132864	888
trnI-GAU	gene	translation-rna	−	132928	133949	1021
ycf68	gene	other	−	133554	133794	240
rrn16	gene	ribosomal-rna	−	134238	135729	1491
trnV-GAC	gene	translation-rna	−	135956	136028	72
rps7	gene	ribosomal-protein	+	138441	138909	468
ndhB	gene	nad-dehydrogenase	+	139237	141386	2149
trnL-CAA	gene	translation-rna	+	141928	142009	81
ycf15	gene	other	−	142269	142518	249
ycf2	gene	other	−	142600	149389	6789
trnI-CAU	gene	translation-rna	+	149477	149551	74
rpl23	gene	ribosomal-protein	+	149710	149992	282
rpl2	gene	ribosomal-protein	+	150010	151493	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ059304.1DNA · accDPQ059304DNA · atpBPQ059304DNA · matKPQ059304DNA · ndhFPQ059304DNA · psbAPQ059304DNA · rbcLPQ059304DNA · rps12PQ059304DNA · ycf1PQ059304