Coordinate-aware organelle record

Scutellaria eplingii chloroplast genome

Available PQ058279.1 151,780 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	74	74
psbA	gene	photosystem-ii	−	281	1340	1059
trnK-UUU	gene	translation-rna	−	1572	4155	2583
matK	gene	other	−	1867	3406	1539
rps16	gene	ribosomal-protein	−	5041	6215	1174
trnQ-UUG	gene	translation-rna	−	7293	7365	72
psbK	gene	photosystem-ii	+	7690	7876	186
psbI	gene	photosystem-ii	+	8268	8379	111
trnS-GCU	gene	translation-rna	−	8497	8585	88
trnG-UCC	gene	translation-rna	+	9295	10042	747
trnR-UCU	gene	translation-rna	+	10216	10288	72
atpA	gene	atp-synthase	−	10384	11908	1524
atpF	gene	atp-synthase	−	11999	13228	1229
atpH	gene	atp-synthase	−	13597	13843	246
atpI	gene	atp-synthase	−	14828	15572	744
rps2	gene	ribosomal-protein	−	15920	16631	711
rpoC2	gene	rna-polymerase	−	16847	21053	4206
rpoC1	gene	rna-polymerase	−	21207	24034	2827
rpoB	gene	rna-polymerase	−	24060	27273	3213
trnC-GCA	gene	translation-rna	+	28425	28496	71
petN	gene	cytochrome	+	29204	29294	90
psbM	gene	photosystem-ii	−	30310	30415	105
trnD-GUC	gene	translation-rna	−	30941	31015	74
trnY-GUA	gene	translation-rna	−	31128	31212	84
trnE-UUC	gene	translation-rna	−	31271	31344	73
trnT-GGU	gene	translation-rna	+	31919	31991	72
psbD	gene	photosystem-ii	+	33301	34363	1062
psbC	gene	photosystem-ii	+	34310	35732	1422
trnS-UGA	gene	translation-rna	−	35976	36068	92
psbZ	gene	photosystem-ii	+	36387	36576	189
trnG-GCC	gene	translation-rna	+	36834	36905	71
trnfM-CAU	gene	translation-rna	−	37052	37126	74
rps14	gene	ribosomal-protein	−	37270	37573	303
psaB	gene	photosystem-i	−	37700	39905	2205
psaA	gene	photosystem-i	−	39930	42183	2253
ycf3	gene	other	−	42885	44807	1922
trnS-GGA	gene	translation-rna	+	45698	45785	87
rps4	gene	ribosomal-protein	−	46067	46673	606
trnT-UGU	gene	translation-rna	−	47006	47079	73
trnL-UAA	gene	translation-rna	+	47761	48330	569
trnF-GAA	gene	translation-rna	+	48635	48708	73
ndhJ	gene	nad-dehydrogenase	−	49362	49839	477
ndhK	gene	nad-dehydrogenase	−	49946	50624	678
ndhC	gene	nad-dehydrogenase	−	50676	51039	363
trnV-UAC	gene	translation-rna	−	51492	52146	654
trnM-CAU	gene	translation-rna	+	52326	52399	73
atpE	gene	atp-synthase	−	52607	53009	402
atpB	gene	atp-synthase	−	53005	54502	1497
rbcL	gene	other	+	55247	56711	1464
accD	gene	other	+	57432	58920	1488
psaI	gene	photosystem-i	+	59630	59741	111
ycf4	gene	other	+	60174	60729	555
cemA	gene	other	+	61471	62071	600
petA	gene	cytochrome	+	62277	63240	963
psbJ	gene	photosystem-ii	−	64266	64389	123
psbL	gene	photosystem-ii	−	64522	64639	117
psbF	gene	photosystem-ii	−	64662	64782	120
psbE	gene	photosystem-ii	−	64796	65048	252
petL	gene	cytochrome	+	65952	66048	96
petG	gene	cytochrome	+	66223	66337	114
trnW-CCA	gene	translation-rna	−	66455	66529	74
trnP-UGG	gene	translation-rna	−	66688	66762	74
psaJ	gene	photosystem-i	+	67034	67169	135
rpl33	gene	ribosomal-protein	+	67647	67848	201
rps18	gene	ribosomal-protein	+	68022	68328	306
rpl20	gene	ribosomal-protein	−	68554	68941	387
rps12	gene	ribosomal-protein	−	69726	97867	28141
rps12	gene	ribosomal-protein	+	69726	138540	68814
clpP	gene	other	−	69993	71939	1946
psbB	gene	photosystem-ii	+	72408	73935	1527
psbT	gene	photosystem-ii	+	74118	74226	108
psbN	gene	photosystem-ii	−	74286	74418	132
psbH	gene	photosystem-ii	+	74521	74743	222
petB	gene	cytochrome	+	74868	76236	1368
petD	gene	cytochrome	+	76424	77626	1202
rpoA	gene	rna-polymerase	−	77788	78802	1014
rps11	gene	ribosomal-protein	−	78873	79290	417
rpl36	gene	ribosomal-protein	−	79392	79506	114
infA	gene	other	−	79601	79835	234
rps8	gene	ribosomal-protein	−	79955	80366	411
rpl14	gene	ribosomal-protein	−	80529	80898	369
rpl16	gene	ribosomal-protein	−	81025	82273	1248
rps3	gene	ribosomal-protein	−	82420	83083	663
rpl22	gene	ribosomal-protein	−	83084	83540	456
rps19	gene	ribosomal-protein	−	83599	83878	279
rpl2	gene	ribosomal-protein	−	83933	85416	1483
rpl23	gene	ribosomal-protein	−	85434	85716	282
trnI-CAU	gene	translation-rna	−	85875	85949	74
ycf2	gene	other	+	86037	92847	6810
ycf15	gene	other	+	92988	93186	198
trnL-CAA	gene	translation-rna	−	93446	93527	81
ndhB	gene	nad-dehydrogenase	−	94069	96281	2212
rps7	gene	ribosomal-protein	−	96555	97023	468
trnV-GAC	gene	translation-rna	+	99421	99493	72
rrn16	gene	ribosomal-rna	+	99720	101211	1491
trnI-GAU	gene	translation-rna	+	101501	102521	1020
trnA-UGC	gene	translation-rna	+	102585	103469	884
rrn23	gene	ribosomal-rna	+	103638	106451	2813
rrn4.5	gene	ribosomal-rna	+	106549	106652	103
rrn5	gene	ribosomal-rna	+	106899	107020	121
trnR-ACG	gene	translation-rna	+	107254	107328	74
trnN-GUU	gene	translation-rna	−	107873	107945	72
ndhF	gene	nad-dehydrogenase	−	109027	111268	2241
rpl32	gene	ribosomal-protein	+	111788	111965	177
trnL-UAG	gene	translation-rna	+	112394	112474	80
ccsA	gene	other	+	112569	113544	975
ndhD	gene	nad-dehydrogenase	−	113778	115281	1503
psaC	gene	photosystem-i	−	115407	115653	246
ndhE	gene	nad-dehydrogenase	−	115908	116214	306
ndhG	gene	nad-dehydrogenase	−	116431	116962	531
ndhI	gene	nad-dehydrogenase	−	117318	117819	501
ndhA	gene	nad-dehydrogenase	−	117899	119987	2088
ndhH	gene	nad-dehydrogenase	−	119988	121170	1182
rps15	gene	ribosomal-protein	−	121267	121540	273
ycf1	gene	other	−	121810	127453	5643
trnN-GUU	gene	translation-rna	+	127671	127743	72
trnR-ACG	gene	translation-rna	−	128288	128362	74
rrn5	gene	ribosomal-rna	−	128596	128717	121
rrn4.5	gene	ribosomal-rna	−	128964	129067	103
rrn23	gene	ribosomal-rna	−	129165	131978	2813
trnA-UGC	gene	translation-rna	−	132147	133031	884
trnI-GAU	gene	translation-rna	−	133095	134115	1020
ycf68	gene	other	−	133666	133960	294
rrn16	gene	ribosomal-rna	−	134405	135896	1491
trnV-GAC	gene	translation-rna	−	136123	136195	72
rps7	gene	ribosomal-protein	+	138593	139061	468
ndhB	gene	nad-dehydrogenase	+	139335	141547	2212
trnL-CAA	gene	translation-rna	+	142089	142170	81
ycf15	gene	other	−	142430	142628	198
ycf2	gene	other	−	142769	149579	6810
trnI-CAU	gene	translation-rna	+	149667	149741	74
rpl23	gene	ribosomal-protein	+	149900	150182	282
rpl2	gene	ribosomal-protein	+	150200	151683	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058279.1DNA · accDPQ058279DNA · atpBPQ058279DNA · matKPQ058279DNA · ndhFPQ058279DNA · psbAPQ058279DNA · rbcLPQ058279DNA · rps12PQ058279DNA · ycf1PQ058279