Coordinate-aware organelle record

Scutellaria flocculosa chloroplast genome

Available PQ058280.1 151,663 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	6	80	74
psbA	gene	photosystem-ii	−	273	1332	1059
trnK-UUU	gene	translation-rna	−	1564	4154	2590
matK	gene	other	−	1859	3398	1539
rps16	gene	ribosomal-protein	−	5042	6212	1170
trnQ-UUG	gene	translation-rna	−	7297	7369	72
psbK	gene	photosystem-ii	+	7695	7881	186
psbI	gene	photosystem-ii	+	8275	8386	111
trnS-GCU	gene	translation-rna	−	8496	8584	88
trnG-UCC	gene	translation-rna	+	9294	10041	747
trnR-UCU	gene	translation-rna	+	10215	10287	72
atpA	gene	atp-synthase	−	10383	11907	1524
atpF	gene	atp-synthase	−	11989	13217	1228
atpH	gene	atp-synthase	−	13579	13825	246
atpI	gene	atp-synthase	−	14819	15563	744
rps2	gene	ribosomal-protein	−	15911	16622	711
rpoC2	gene	rna-polymerase	−	16838	21044	4206
rpoC1	gene	rna-polymerase	−	21198	24023	2825
rpoB	gene	rna-polymerase	−	24049	27262	3213
trnC-GCA	gene	translation-rna	+	28415	28486	71
petN	gene	cytochrome	+	29194	29284	90
psbM	gene	photosystem-ii	−	30300	30405	105
trnD-GUC	gene	translation-rna	−	30931	31005	74
trnY-GUA	gene	translation-rna	−	31118	31202	84
trnE-UUC	gene	translation-rna	−	31261	31334	73
trnT-GGU	gene	translation-rna	+	31909	31981	72
psbD	gene	photosystem-ii	+	33158	34220	1062
psbC	gene	photosystem-ii	+	34167	35589	1422
trnS-UGA	gene	translation-rna	−	35832	35924	92
psbZ	gene	photosystem-ii	+	36243	36432	189
trnG-GCC	gene	translation-rna	+	36690	36761	71
trnfM-CAU	gene	translation-rna	−	36908	36982	74
rps14	gene	ribosomal-protein	−	37131	37434	303
psaB	gene	photosystem-i	−	37561	39766	2205
psaA	gene	photosystem-i	−	39791	42044	2253
ycf3	gene	other	−	42742	44664	1922
trnS-GGA	gene	translation-rna	+	45557	45644	87
rps4	gene	ribosomal-protein	−	45928	46534	606
trnT-UGU	gene	translation-rna	−	46868	46941	73
trnL-UAA	gene	translation-rna	+	47624	48193	569
trnF-GAA	gene	translation-rna	+	48498	48571	73
ndhJ	gene	nad-dehydrogenase	−	49220	49697	477
ndhK	gene	nad-dehydrogenase	−	49804	50482	678
ndhC	gene	nad-dehydrogenase	−	50534	50897	363
trnV-UAC	gene	translation-rna	−	51350	52004	654
trnM-CAU	gene	translation-rna	+	52184	52257	73
atpE	gene	atp-synthase	−	52465	52867	402
atpB	gene	atp-synthase	−	52863	54360	1497
rbcL	gene	other	+	55105	56569	1464
accD	gene	other	+	57291	58770	1479
psaI	gene	photosystem-i	+	59480	59591	111
ycf4	gene	other	+	60024	60579	555
cemA	gene	other	+	61347	61947	600
petA	gene	cytochrome	+	62153	63116	963
psbJ	gene	photosystem-ii	−	64125	64248	123
psbL	gene	photosystem-ii	−	64381	64603	222
psbF	gene	photosystem-ii	−	64521	64641	120
psbE	gene	photosystem-ii	−	64655	64907	252
petL	gene	cytochrome	+	65813	65909	96
petG	gene	cytochrome	+	66084	66198	114
trnW-CCA	gene	translation-rna	−	66316	66390	74
trnP-UGG	gene	translation-rna	−	66549	66623	74
psaJ	gene	photosystem-i	+	66895	67030	135
rpl33	gene	ribosomal-protein	+	67511	67712	201
rps18	gene	ribosomal-protein	+	67885	68191	306
rpl20	gene	ribosomal-protein	−	68424	68811	387
rps12	gene	ribosomal-protein	−	69620	97742	28122
rps12	gene	ribosomal-protein	+	69620	138429	68809
clpP	gene	other	−	69875	71810	1935
psbB	gene	photosystem-ii	+	72279	73806	1527
psbT	gene	photosystem-ii	+	73999	74107	108
psbN	gene	photosystem-ii	−	74167	74299	132
psbH	gene	photosystem-ii	+	74402	74624	222
petB	gene	cytochrome	+	74749	76119	1370
petD	gene	cytochrome	+	76307	77509	1202
rpoA	gene	rna-polymerase	−	77671	78685	1014
rps11	gene	ribosomal-protein	−	78756	79173	417
rpl36	gene	ribosomal-protein	−	79275	79389	114
infA	gene	other	−	79484	79718	234
rps8	gene	ribosomal-protein	−	79837	80248	411
rpl14	gene	ribosomal-protein	−	80418	80787	369
rpl16	gene	ribosomal-protein	−	80914	82148	1234
rps3	gene	ribosomal-protein	−	82295	82958	663
rpl22	gene	ribosomal-protein	−	82959	83415	456
rps19	gene	ribosomal-protein	−	83474	83753	279
rpl2	gene	ribosomal-protein	−	83808	85291	1483
rpl23	gene	ribosomal-protein	−	85309	85591	282
trnI-CAU	gene	translation-rna	−	85750	85824	74
ycf2	gene	other	+	85912	92722	6810
ycf15	gene	other	+	92812	93061	249
trnL-CAA	gene	translation-rna	−	93321	93402	81
ndhB	gene	nad-dehydrogenase	−	93944	96156	2212
rps7	gene	ribosomal-protein	−	96430	96898	468
trnV-GAC	gene	translation-rna	+	99296	99368	72
rrn16	gene	ribosomal-rna	+	99595	101086	1491
trnI-GAU	gene	translation-rna	+	101376	102396	1020
trnA-UGC	gene	translation-rna	+	102460	103347	887
rrn23	gene	ribosomal-rna	+	103516	106329	2813
rrn4.5	gene	ribosomal-rna	+	106427	106530	103
rrn5	gene	ribosomal-rna	+	106777	106898	121
trnR-ACG	gene	translation-rna	+	107132	107206	74
trnN-GUU	gene	translation-rna	−	107762	107834	72
ndhF	gene	nad-dehydrogenase	−	108916	111157	2241
rpl32	gene	ribosomal-protein	+	111679	111856	177
trnL-UAG	gene	translation-rna	+	112287	112367	80
ccsA	gene	other	+	112468	113443	975
ndhD	gene	nad-dehydrogenase	−	113677	115180	1503
psaC	gene	photosystem-i	−	115306	115552	246
ndhE	gene	nad-dehydrogenase	−	115785	116091	306
ndhG	gene	nad-dehydrogenase	−	116308	116839	531
ndhI	gene	nad-dehydrogenase	−	117196	117697	501
ndhA	gene	nad-dehydrogenase	−	117777	119859	2082
ndhH	gene	nad-dehydrogenase	−	119860	121042	1182
rps15	gene	ribosomal-protein	−	121138	121411	273
ycf1	gene	other	−	121685	127328	5643
trnN-GUU	gene	translation-rna	+	127546	127618	72
trnR-ACG	gene	translation-rna	−	128174	128248	74
rrn5	gene	ribosomal-rna	−	128482	128603	121
rrn4.5	gene	ribosomal-rna	−	128850	128953	103
rrn23	gene	ribosomal-rna	−	129051	131864	2813
trnA-UGC	gene	translation-rna	−	132033	132920	887
trnI-GAU	gene	translation-rna	−	132984	134004	1020
ycf68	gene	other	−	133555	133849	294
rrn16	gene	ribosomal-rna	−	134294	135785	1491
trnV-GAC	gene	translation-rna	−	136012	136084	72
rps7	gene	ribosomal-protein	+	138482	138950	468
ndhB	gene	nad-dehydrogenase	+	139224	141436	2212
trnL-CAA	gene	translation-rna	+	141978	142059	81
ycf15	gene	other	−	142319	142568	249
ycf2	gene	other	−	142658	149468	6810
trnI-CAU	gene	translation-rna	+	149556	149630	74
rpl23	gene	ribosomal-protein	+	149789	150071	282
rpl2	gene	ribosomal-protein	+	150089	151572	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058280.1DNA · accDPQ058280DNA · atpBPQ058280DNA · matKPQ058280DNA · ndhFPQ058280DNA · psbAPQ058280DNA · rbcLPQ058280DNA · rps12PQ058280DNA · ycf1PQ058280