Coordinate-aware organelle record

Scutellaria gaumeri chloroplast genome

Available MW420958.1 152,339 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	331	1390	1059
trnK-UUU	gene	translation-rna	−	1634	4221	2587
matK	gene	other	−	1924	3469	1545
rps16	gene	ribosomal-protein	−	5143	6315	1172
trnQ-UUC	gene	translation-rna	−	7440	7512	72
psbK	gene	photosystem-ii	+	7836	8022	186
psbI	gene	photosystem-ii	+	8417	8528	111
trnS-GCU	gene	translation-rna	−	8643	8731	88
trnG-CGA	gene	translation-rna	+	9410	10163	753
trnR-UCU	gene	translation-rna	+	10336	10408	72
atpA	gene	atp-synthase	−	10504	12028	1524
atpF	gene	atp-synthase	−	12109	13339	1230
atpH	gene	atp-synthase	−	13703	13949	246
atpI	gene	atp-synthase	−	14932	15676	744
rps2	gene	ribosomal-protein	−	16005	16716	711
rpoC2	gene	rna-polymerase	−	16932	21138	4206
rpoC1	gene	rna-polymerase	−	21283	24115	2832
rpoB	gene	rna-polymerase	−	24141	27354	3213
trnC-GCA	gene	translation-rna	+	28522	28593	71
petN	gene	cytochrome	+	29319	29409	90
psbM	gene	photosystem-ii	−	30416	30530	114
trnD-GUC	gene	translation-rna	−	31056	31130	74
trnY-GUA	gene	translation-rna	−	31243	31327	84
trnE-UUC	gene	translation-rna	−	31386	31459	73
trnT-GGU	gene	translation-rna	+	32034	32106	72
psbD	gene	photosystem-ii	+	33414	34476	1062
psbC	gene	photosystem-ii	+	34423	35845	1422
trnS-UCA	gene	translation-rna	−	36086	36179	93
psbZ	gene	photosystem-ii	+	36498	36687	189
trnG-GCC	gene	translation-rna	+	36958	37029	71
trnfM-CAU	gene	translation-rna	−	37171	37245	74
rps14	gene	ribosomal-protein	−	37394	37697	303
psaB	gene	photosystem-i	−	37824	40029	2205
psaA	gene	photosystem-i	−	40054	42307	2253
ycf3	gene	other	−	42997	44919	1922
trnS-GGA	gene	translation-rna	+	45786	45873	87
rps4	gene	ribosomal-protein	−	46156	46762	606
trnT-UGU	gene	translation-rna	−	47088	47161	73
trnL-UAA	gene	translation-rna	+	47839	48409	570
trnF-GAA	gene	translation-rna	+	48718	48791	73
ndhJ	gene	nad-dehydrogenase	−	49442	49919	477
ndhK	gene	nad-dehydrogenase	−	50026	50704	678
ndhC	gene	nad-dehydrogenase	−	50756	51119	363
trnV-UAC	gene	translation-rna	−	52028	52682	654
trnM-CAU	gene	translation-rna	+	52862	52935	73
atpE	gene	atp-synthase	−	53144	53546	402
atpB	gene	atp-synthase	−	53542	55039	1497
rbcL	gene	other	+	55812	57252	1440
accD	gene	other	+	57975	59454	1479
psaI	gene	photosystem-i	+	60165	60276	111
ycf4	gene	other	+	60717	61272	555
cemA	gene	other	+	61951	62611	660
petA	gene	cytochrome	+	62817	63780	963
pabJ	gene	other	−	64795	64918	123
psbL	gene	photosystem-ii	−	65051	65168	117
psbF	gene	photosystem-ii	−	65191	65311	120
psbE	gene	photosystem-ii	−	65325	65577	252
petL	gene	cytochrome	+	66484	66580	96
petG	gene	cytochrome	+	66755	66869	114
trnW-CCA	gene	translation-rna	−	66987	67061	74
trnP-UGG	gene	translation-rna	−	67216	67290	74
psbJ	gene	photosystem-ii	+	67562	67697	135
rpl33	gene	ribosomal-protein	+	68169	68370	201
rps18	gene	ribosomal-protein	+	68545	68851	306
rpl20	gene	ribosomal-protein	−	69086	69473	387
rps12	gene	ribosomal-protein	−	70260	98396	28136
rps12	gene	ribosomal-protein	+	70260	139100	68840
clpP	gene	other	−	70526	72461	1935
psbB	gene	photosystem-ii	+	72923	74450	1527
psbT	gene	photosystem-ii	+	74641	74749	108
psbN	gene	photosystem-ii	−	74809	74941	132
psbH	gene	photosystem-ii	+	75044	75266	222
petB	gene	cytochrome	+	75391	76759	1368
petD	gene	cytochrome	+	76947	78159	1212
rpoA	gene	rna-polymerase	−	78321	79335	1014
rps11	gene	ribosomal-protein	−	79406	79823	417
rpl36	gene	ribosomal-protein	−	79924	80038	114
infA	gene	other	−	80133	80367	234
rps8	gene	ribosomal-protein	−	80485	80896	411
rpl14	gene	ribosomal-protein	−	81064	81433	369
rpl16	gene	ribosomal-protein	−	81550	82795	1245
rps3	gene	ribosomal-protein	−	82949	83612	663
rpl22	gene	ribosomal-protein	−	83638	84070	432
rps19	gene	ribosomal-protein	−	84128	84407	279
rpl2	gene	ribosomal-protein	−	84462	85945	1483
rpl23	gene	ribosomal-protein	−	85963	86245	282
trnI-CAU	gene	translation-rna	−	86404	86478	74
ycf2	gene	other	+	86566	93376	6810
ycf15	gene	other	+	93517	93715	198
trnL-CAA	gene	translation-rna	−	93975	94056	81
ndhB	gene	nad-dehydrogenase	−	94598	96810	2212
rps7	gene	ribosomal-protein	−	97084	97552	468
trnV-GAC	gene	translation-rna	+	99966	100038	72
rrn16	gene	ribosomal-rna	+	100265	101756	1491
trnI-GAU	gene	translation-rna	+	102054	103073	1019
trnA-UGC	gene	translation-rna	+	103138	104030	892
rrn23	gene	ribosomal-rna	+	104205	107018	2813
rrn4.5	gene	ribosomal-rna	+	107116	107219	103
rrn5	gene	ribosomal-rna	+	107466	107587	121
trnR-ACG	gene	translation-rna	+	107821	107895	74
trnN-GUU	gene	translation-rna	+	108444	108516	72
ndhF	gene	nad-dehydrogenase	−	109592	111833	2241
rpl32	gene	ribosomal-protein	+	112355	112532	177
trnL-UAG	gene	translation-rna	+	112964	113044	80
ccsA	gene	other	+	113151	114126	975
ndhD	gene	nad-dehydrogenase	−	114353	115883	1530
psaC	gene	photosystem-i	−	115982	116228	246
ndhE	gene	nad-dehydrogenase	−	116483	116789	306
ndhG	gene	nad-dehydrogenase	−	117020	117551	531
ndhI	gene	nad-dehydrogenase	−	117902	118403	501
ndhA	gene	nad-dehydrogenase	−	118483	120584	2101
ndhH	gene	nad-dehydrogenase	−	120585	121767	1182
rps15	gene	ribosomal-protein	−	121863	122136	273
ycf1	gene	other	−	122403	127860	5457
trnN-GUU	gene	translation-rna	+	128189	128261	72
trnR-ACG	gene	translation-rna	−	128810	128884	74
rrn5	gene	ribosomal-rna	−	129118	129239	121
rrn4.5	gene	ribosomal-rna	−	129486	129589	103
rrn23	gene	ribosomal-rna	−	129687	132500	2813
trnA-UGC	gene	translation-rna	−	132675	133567	892
trnI-GAU	gene	translation-rna	−	133632	134651	1019
rrn16	gene	ribosomal-rna	−	134949	136440	1491
trnV-GAC	gene	translation-rna	−	136667	136739	72
rps7	gene	ribosomal-protein	+	139153	139621	468
ndhB	gene	nad-dehydrogenase	+	139895	142107	2212
trnL-CAA	gene	translation-rna	+	142649	142730	81
ycf15	gene	other	−	142990	143188	198
ycf2	gene	other	−	143329	150139	6810
trnI-CAU	gene	translation-rna	+	150227	150301	74
rpl23	gene	ribosomal-protein	+	150460	150742	282
rpl2	gene	ribosomal-protein	+	150760	152243	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420958.1DNA · accDMW420958DNA · atpBMW420958DNA · matKMW420958DNA · ndhFMW420958DNA · psbAMW420958DNA · rbcLMW420958DNA · rps12MW420958DNA · ycf1MW420958