Coordinate-aware organelle record

Scutellaria grandiflora chloroplast genome

Available PQ058243.1 151,836 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1673	4255	2582
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5156	6316	1160
trnQ-UUG	gene	translation-rna	−	7081	7153	72
psbK	gene	photosystem-ii	+	7477	7663	186
psbI	gene	photosystem-ii	+	8052	8163	111
trnS-GCU	gene	translation-rna	−	8279	8367	88
trnG-UCC	gene	translation-rna	+	9066	9823	757
trnR-UCU	gene	translation-rna	+	9997	10069	72
atpA	gene	atp-synthase	−	10165	11689	1524
atpF	gene	atp-synthase	−	11770	13005	1235
atpH	gene	atp-synthase	−	13365	13611	246
atpI	gene	atp-synthase	−	14638	15382	744
rps2	gene	ribosomal-protein	−	15728	16439	711
rpoC2	gene	rna-polymerase	−	16655	20861	4206
rpoC1	gene	rna-polymerase	−	21015	23852	2837
rpoB	gene	rna-polymerase	−	23878	27091	3213
trnC-GCA	gene	translation-rna	+	28251	28322	71
petN	gene	cytochrome	+	29035	29125	90
psbM	gene	photosystem-ii	−	30135	30240	105
trnD-GUC	gene	translation-rna	−	30765	30839	74
trnY-GUA	gene	translation-rna	−	30952	31036	84
trnE-UUC	gene	translation-rna	−	31095	31168	73
trnT-GGU	gene	translation-rna	+	31743	31815	72
psbD	gene	photosystem-ii	+	33119	34181	1062
psbC	gene	photosystem-ii	+	34128	35550	1422
trnS-UGA	gene	translation-rna	−	35785	35877	92
psbZ	gene	photosystem-ii	+	36192	36381	189
trnG-GCC	gene	translation-rna	+	36658	36729	71
trnfM-CAU	gene	translation-rna	−	36873	36947	74
rps14	gene	ribosomal-protein	−	37101	37404	303
psaB	gene	photosystem-i	−	37532	39737	2205
psaA	gene	photosystem-i	−	39762	42015	2253
ycf3	gene	other	−	42703	44626	1923
trnS-GGA	gene	translation-rna	+	45508	45595	87
rps4	gene	ribosomal-protein	−	45870	46476	606
trnT-UGU	gene	translation-rna	−	46820	46893	73
trnL-UAA	gene	translation-rna	+	47574	48134	560
trnF-GAA	gene	translation-rna	+	48436	48509	73
ndhJ	gene	nad-dehydrogenase	−	49157	49634	477
ndhK	gene	nad-dehydrogenase	−	49742	50420	678
ndhC	gene	nad-dehydrogenase	−	50472	50835	363
trnV-UAC	gene	translation-rna	−	51821	52474	653
trnM-CAU	gene	translation-rna	+	52662	52735	73
atpE	gene	atp-synthase	−	52928	53330	402
atpB	gene	atp-synthase	−	53326	54823	1497
rbcL	gene	other	+	55573	57037	1464
accD	gene	other	+	57750	59229	1479
psaI	gene	photosystem-i	+	59935	60046	111
ycf4	gene	other	+	60479	61034	555
cemA	gene	other	+	61782	62382	600
petA	gene	cytochrome	+	62583	63546	963
psbJ	gene	photosystem-ii	−	64554	64677	123
psbL	gene	photosystem-ii	−	64810	65032	222
psbF	gene	photosystem-ii	−	64950	65070	120
psbE	gene	photosystem-ii	−	65084	65336	252
petL	gene	cytochrome	+	66212	66308	96
petG	gene	cytochrome	+	66483	66597	114
trnW-CCA	gene	translation-rna	−	66715	66789	74
trnP-UGG	gene	translation-rna	−	66958	67032	74
psaJ	gene	photosystem-i	+	67240	67438	198
rpl33	gene	ribosomal-protein	+	67908	68109	201
rps18	gene	ribosomal-protein	+	68283	68589	306
rpl20	gene	ribosomal-protein	−	68823	69210	387
rps12	gene	ribosomal-protein	−	70004	98057	28053
rps12	gene	ribosomal-protein	+	70004	138604	68600
clpP	gene	other	−	70259	72189	1930
psbB	gene	photosystem-ii	+	72640	74167	1527
psbT	gene	photosystem-ii	+	74358	74466	108
psbN	gene	photosystem-ii	−	74526	74658	132
psbH	gene	photosystem-ii	+	74761	74983	222
petB	gene	cytochrome	+	75107	76477	1370
petD	gene	cytochrome	+	76659	77866	1207
rpoA	gene	rna-polymerase	−	78198	79020	822
rps11	gene	ribosomal-protein	−	79091	79508	417
rpl36	gene	ribosomal-protein	−	79609	79723	114
infA	gene	other	−	79817	80051	234
rps8	gene	ribosomal-protein	−	80174	80585	411
rpl14	gene	ribosomal-protein	−	80736	81105	369
rpl16	gene	ribosomal-protein	−	81230	82467	1237
rps3	gene	ribosomal-protein	−	82622	83285	663
rpl22	gene	ribosomal-protein	−	83286	83742	456
rps19	gene	ribosomal-protein	−	83801	84080	279
rpl2	gene	ribosomal-protein	−	84134	85616	1482
rpl23	gene	ribosomal-protein	−	85634	85916	282
trnI-CAU	gene	translation-rna	−	86075	86149	74
ycf2	gene	other	+	86237	93038	6801
ycf15	gene	other	+	93128	93377	249
trnL-CAA	gene	translation-rna	−	93636	93717	81
ndhB	gene	nad-dehydrogenase	−	94259	96417	2158
rps7	gene	ribosomal-protein	−	96745	97213	468
trnV-GAC	gene	translation-rna	+	99628	99700	72
rrn16	gene	ribosomal-rna	+	99926	101417	1491
trnI-GAU	gene	translation-rna	+	101715	102736	1021
trnA-UGC	gene	translation-rna	+	102800	103686	886
rrn23	gene	ribosomal-rna	+	103855	106667	2812
rrn4.5	gene	ribosomal-rna	+	106765	106868	103
rrn5	gene	ribosomal-rna	+	107115	107236	121
trnR-ACG	gene	translation-rna	+	107470	107544	74
trnN-GUU	gene	translation-rna	−	108092	108164	72
ndhF	gene	nad-dehydrogenase	−	109220	111482	2262
rpl32	gene	ribosomal-protein	+	111809	111986	177
trnL-UAG	gene	translation-rna	+	112430	112510	80
ccsA	gene	other	+	112611	113586	975
ndhD	gene	nad-dehydrogenase	−	113843	115373	1530
psaC	gene	photosystem-i	−	115474	115720	246
ndhE	gene	nad-dehydrogenase	−	115975	116281	306
ndhG	gene	nad-dehydrogenase	−	116497	117028	531
ndhI	gene	nad-dehydrogenase	−	117394	117895	501
ndhA	gene	nad-dehydrogenase	−	117980	120102	2122
ndhH	gene	nad-dehydrogenase	−	120103	121285	1182
rps15	gene	ribosomal-protein	−	121381	121654	273
ycf1	gene	other	−	121851	127488	5637
trnN-GUU	gene	translation-rna	+	127706	127778	72
trnR-ACG	gene	translation-rna	−	128326	128400	74
rrn5	gene	ribosomal-rna	−	128634	128755	121
rrn4.5	gene	ribosomal-rna	−	129002	129105	103
rrn23	gene	ribosomal-rna	−	129203	132015	2812
trnA-UGC	gene	translation-rna	−	132184	133070	886
trnI-GAU	gene	translation-rna	−	133134	134155	1021
ycf68	gene	other	−	133706	134000	294
rrn16	gene	ribosomal-rna	−	134453	135944	1491
trnV-GAC	gene	translation-rna	−	136170	136242	72
rps7	gene	ribosomal-protein	+	138657	139125	468
ndhB	gene	nad-dehydrogenase	+	139453	141611	2158
trnL-CAA	gene	translation-rna	+	142153	142234	81
ycf15	gene	other	−	142493	142742	249
ycf2	gene	other	−	142832	149633	6801
trnI-CAU	gene	translation-rna	+	149721	149795	74
rpl23	gene	ribosomal-protein	+	149954	150236	282
rpl2	gene	ribosomal-protein	+	150254	151736	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ058243.1DNA · accDPQ058243DNA · atpBPQ058243DNA · matKPQ058243DNA · ndhFPQ058243DNA · psbAPQ058243DNA · rbcLPQ058243DNA · rps12PQ058243DNA · ycf1PQ058243